Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30088
(854 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132753-1|AAI32754.1| 226|Homo sapiens LOC123688 protein protein. 79 3e-14
AK126453-1|BAC86556.1| 172|Homo sapiens protein ( Homo sapiens ... 77 8e-14
Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for ... 33 1.0
X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor pr... 33 1.0
S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine r... 33 1.0
BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein. 33 1.0
AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein. 33 1.0
BC041095-1|AAH41095.1| 709|Homo sapiens solute carrier organic ... 31 5.3
AF205073-1|AAG42205.1| 687|Homo sapiens organic anion transport... 31 5.3
AB026256-1|BAA78638.1| 709|Homo sapiens organic anion transport... 31 5.3
AB020687-1|BAA74903.2| 727|Homo sapiens KIAA0880 protein protein. 31 5.3
AK123049-1|BAC85525.1| 128|Homo sapiens protein. 31 7.1
BX538319-1|CAD98093.1| 1290|Homo sapiens hypothetical protein pr... 30 9.3
BC115022-1|AAI15023.1| 1551|Homo sapiens ROBO1 protein protein. 30 9.3
BC115020-1|AAI15021.1| 1606|Homo sapiens ROBO1 protein protein. 30 9.3
BC112336-1|AAI12337.1| 1607|Homo sapiens ROBO1 protein protein. 30 9.3
AF040990-1|AAC39575.1| 1651|Homo sapiens roundabout 1 protein. 30 9.3
>BC132753-1|AAI32754.1| 226|Homo sapiens LOC123688 protein protein.
Length = 226
Score = 78.6 bits (185), Expect = 3e-14
Identities = 51/157 (32%), Positives = 73/157 (46%), Gaps = 4/157 (2%)
Frame = +1
Query: 130 RPIIDHEQVKLLAERLYGISVLDLTELNGYDDKNYKLTEDPNMKNPLITNHSPYGYVLKI 309
+P EQ L E ++G+ V + L YDD+N+ + T P YVLKI
Sbjct: 14 KPTFSEEQASALVESVFGLKVSKVRPLPSYDDQNFHVYVSK-------TKDGPTEYVLKI 66
Query: 310 MNSIDSQNVGVVEAQNEIMNFLATRSVTCPKPVRNIFGHLHSIE--DLGG--KKHAVRLL 477
N+ S+N ++E QN I+ FL + S+ D G K + VRLL
Sbjct: 67 SNTKASKNPDLIEVQNHIIMFLKAAGFPTASVCHTKGDNTASLVSVDSGSEIKSYLVRLL 126
Query: 478 EYVPGELLKNCPLSEALLYQLGEFVANLDNKLQADEH 588
Y+PG + P+S LLY++G+ A LD LQ H
Sbjct: 127 TYLPGRPIAELPVSPQLLYEIGKLAAKLDKTLQRFHH 163
>AK126453-1|BAC86556.1| 172|Homo sapiens protein ( Homo sapiens
cDNA FLJ44489 fis, clone UTERU2035114. ).
Length = 172
Score = 77.0 bits (181), Expect = 8e-14
Identities = 50/153 (32%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Frame = +1
Query: 130 RPIIDHEQVKLLAERLYGISVLDLTELNGYDDKNYKLTEDPNMKNPLITNHSPYGYVLKI 309
+P EQ L E ++G+ V + L YDD+N+ + T P YVLKI
Sbjct: 14 KPTFSEEQASALVESVFGLKVSKVRPLPSYDDQNFHVYVSK-------TKDGPTEYVLKI 66
Query: 310 MNSIDSQNVGVVEAQNEIMNFLATRSVTCPKPVRNIFGHLHSIE--DLGG--KKHAVRLL 477
N+ S+N ++E QN I+ FL + S+ D G K + VRLL
Sbjct: 67 SNTKASKNPDLIEVQNHIIMFLKAAGFPTASVCHTKGDNTASLVSVDSGSEIKSYLVRLL 126
Query: 478 EYVPGELLKNCPLSEALLYQLGEFVANLDNKLQ 576
Y+PG + P+S LLY++G+ A LD LQ
Sbjct: 127 TYLPGRPIAELPVSPQLLYEIGKLAAKLDKTLQ 159
>Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for
muscle acetylcholine receptor alpha-subunit. ).
Length = 457
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +1
Query: 97 AKLLLEPGQVIRPIIDHEQVKLLAERLYGISVLDLTELNGYDDKNYKLTEDPNMKNPLIT 276
AKL + V+RP+ DH QV + L I ++++ E+N N +L + N L
Sbjct: 29 AKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEVNQIVTTNVRLKQQWVDYN-LKW 87
Query: 277 NHSPYGYVLKI 309
N YG V KI
Sbjct: 88 NPDDYGGVKKI 98
>X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor
protein.
Length = 457
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +1
Query: 97 AKLLLEPGQVIRPIIDHEQVKLLAERLYGISVLDLTELNGYDDKNYKLTEDPNMKNPLIT 276
AKL + V+RP+ DH QV + L I ++++ E+N N +L + N L
Sbjct: 29 AKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEVNQIVTTNVRLKQQWVDYN-LKW 87
Query: 277 NHSPYGYVLKI 309
N YG V KI
Sbjct: 88 NPDDYGGVKKI 98
>S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine
receptor alpha subunit|AChR protein.
Length = 457
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +1
Query: 97 AKLLLEPGQVIRPIIDHEQVKLLAERLYGISVLDLTELNGYDDKNYKLTEDPNMKNPLIT 276
AKL + V+RP+ DH QV + L I ++++ E+N N +L + N L
Sbjct: 29 AKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEVNQIVTTNVRLKQQWVDYN-LKW 87
Query: 277 NHSPYGYVLKI 309
N YG V KI
Sbjct: 88 NPDDYGGVKKI 98
>BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein.
Length = 269
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +1
Query: 97 AKLLLEPGQVIRPIIDHEQVKLLAERLYGISVLDLTELNGYDDKNYKLTEDPNMKNPLIT 276
AKL + V+RP+ DH QV + L I ++++ E+N N +L + N L
Sbjct: 29 AKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEVNQIVTTNVRLKQQWVDYN-LKW 87
Query: 277 NHSPYGYVLKI 309
N YG V KI
Sbjct: 88 NPDDYGGVKKI 98
>AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein.
Length = 457
Score = 33.5 bits (73), Expect = 1.0
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +1
Query: 97 AKLLLEPGQVIRPIIDHEQVKLLAERLYGISVLDLTELNGYDDKNYKLTEDPNMKNPLIT 276
AKL + V+RP+ DH QV + L I ++++ E+N N +L + N L
Sbjct: 29 AKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEVNQIVTTNVRLKQQWVDYN-LKW 87
Query: 277 NHSPYGYVLKI 309
N YG V KI
Sbjct: 88 NPDDYGGVKKI 98
>BC041095-1|AAH41095.1| 709|Homo sapiens solute carrier organic
anion transporter family, member 2B1 protein.
Length = 709
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = -2
Query: 718 HSSVYFHYDGIIFSVSLVGSGLALPLA--LLKSMGDGNHSPSGG 593
H+S Y GI+F+V+++G GLA L +L+ D N P GG
Sbjct: 219 HNSNSPLYLGILFAVTMMGPGLAFGLGSLMLRLYVDINQMPEGG 262
>AF205073-1|AAG42205.1| 687|Homo sapiens organic anion transporter
polypeptide-related protein 2 protein.
Length = 687
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = -2
Query: 718 HSSVYFHYDGIIFSVSLVGSGLALPLA--LLKSMGDGNHSPSGG 593
H+S Y GI+F+V+++G GLA L +L+ D N P GG
Sbjct: 197 HNSNSPLYLGILFAVTMMGPGLAFGLGSLMLRLYVDINQMPEGG 240
>AB026256-1|BAA78638.1| 709|Homo sapiens organic anion transporter
OATP-B protein.
Length = 709
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = -2
Query: 718 HSSVYFHYDGIIFSVSLVGSGLALPLA--LLKSMGDGNHSPSGG 593
H+S Y GI+F+V+++G GLA L +L+ D N P GG
Sbjct: 219 HNSNSPLYLGILFAVTMMGPGLAFGLGSLMLRLYVDINQMPEGG 262
>AB020687-1|BAA74903.2| 727|Homo sapiens KIAA0880 protein protein.
Length = 727
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = -2
Query: 718 HSSVYFHYDGIIFSVSLVGSGLALPLA--LLKSMGDGNHSPSGG 593
H+S Y GI+F+V+++G GLA L +L+ D N P GG
Sbjct: 237 HNSNSPLYLGILFAVTMMGPGLAFGLGSLMLRLYVDINQMPEGG 280
>AK123049-1|BAC85525.1| 128|Homo sapiens protein.
Length = 128
Score = 30.7 bits (66), Expect = 7.1
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 616 RRPWTSATPGAEPSRCLPKIQRI*FRRSGNTQNCGMHAGGRDATGRPRIFEK 771
R P S PG+ P RC + R R C H+G +ATG+P + K
Sbjct: 29 RMPSRSMAPGSAPPRCGKGLGRA--LRPLPRSPCSPHSGTANATGQPAVPRK 78
>BX538319-1|CAD98093.1| 1290|Homo sapiens hypothetical protein
protein.
Length = 1290
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -3
Query: 471 SYGVFLASQVLDRVQVTEDIPYWLGTGHGASGQKIHNLILGLNNADVLRVNRI 313
+YG+ SQ+ D V+ + +P G H +++ N +L L+N VL + I
Sbjct: 278 AYGISDPSQISDPVKTQDVLPTSQGVDHKQVQRELGNAVLHLHNPTVLSSSSI 330
>BC115022-1|AAI15023.1| 1551|Homo sapiens ROBO1 protein protein.
Length = 1551
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -3
Query: 471 SYGVFLASQVLDRVQVTEDIPYWLGTGHGASGQKIHNLILGLNNADVLRVNRI 313
+YG+ SQ+ D V+ + +P G H +++ N +L L+N VL + I
Sbjct: 603 AYGISDPSQISDPVKTQDVLPTSQGVDHKQVQRELGNAVLHLHNPTVLSSSSI 655
>BC115020-1|AAI15021.1| 1606|Homo sapiens ROBO1 protein protein.
Length = 1606
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -3
Query: 471 SYGVFLASQVLDRVQVTEDIPYWLGTGHGASGQKIHNLILGLNNADVLRVNRI 313
+YG+ SQ+ D V+ + +P G H +++ N +L L+N VL + I
Sbjct: 603 AYGISDPSQISDPVKTQDVLPTSQGVDHKQVQRELGNAVLHLHNPTVLSPSSI 655
>BC112336-1|AAI12337.1| 1607|Homo sapiens ROBO1 protein protein.
Length = 1607
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -3
Query: 471 SYGVFLASQVLDRVQVTEDIPYWLGTGHGASGQKIHNLILGLNNADVLRVNRI 313
+YG+ SQ+ D V+ + +P G H +++ N +L L+N VL + I
Sbjct: 603 AYGISDPSQISDPVKTQDVLPTSQGVDHKQVQRELGNAVLHLHNPTVLSSSSI 655
>AF040990-1|AAC39575.1| 1651|Homo sapiens roundabout 1 protein.
Length = 1651
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -3
Query: 471 SYGVFLASQVLDRVQVTEDIPYWLGTGHGASGQKIHNLILGLNNADVLRVNRI 313
+YG+ SQ+ D V+ + +P G H +++ N +L L+N VL + I
Sbjct: 639 AYGISDPSQISDPVKTQDVLPTSQGVDHKQVQRELGNAVLHLHNPTVLSSSSI 691
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,560,646
Number of Sequences: 237096
Number of extensions: 2860586
Number of successful extensions: 7204
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7195
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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