Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30087
         (810 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    23   2.2  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   3.8  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   3.8  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   3.8  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    22   5.0  

>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 113 KWRIRGCAKGRCDPLQIGQQISSWISE 193
           K R++       D LQ+GQ  S W +E
Sbjct: 119 KERLKTQGISHLDKLQLGQYFSPWFAE 145


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -3

Query: 178 ANLLANLQRITPSLSTSSYAPFGSGSPKTSEIQVRTSCS 62
           +N+L NL  ITP+++ +        SP +     RTS S
Sbjct: 126 SNILQNLADITPNVTPNCDVKSSVCSPGSGHQDSRTSPS 164


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -3

Query: 178 ANLLANLQRITPSLSTSSYAPFGSGSPKTSEIQVRTSCS 62
           +N+L NL  ITP+++ +        SP +     RTS S
Sbjct: 126 SNILQNLADITPNVTPNCDVKSSVCSPGSGHQDSRTSPS 164


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -3

Query: 178 ANLLANLQRITPSLSTSSYAPFGSGSPKTSEIQVRTSCS 62
           +N+L NL  ITP+++ +        SP +     RTS S
Sbjct: 126 SNILQNLADITPNVTPNCDVKSSVCSPGSGHQDSRTSPS 164


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +3

Query: 6   TSLETRFRLHTMPARNKDQEQEVLTWISDVLGEPLPNGAYEDV 134
           T++   F L  + A +KD ++ +L  + DVLG+      Y D+
Sbjct: 1   TAVALNFALMLI-ACHKDVQETILQEMRDVLGDIHAKPTYSDL 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,144
Number of Sequences: 336
Number of extensions: 4914
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)