Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30087
(810 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0997 + 7884974-7885043,7885689-7885975,7886056-7886311,788... 48 1e-05
11_06_0689 - 26294961-26294976,26295271-26295414,26295506-262959... 42 8e-04
05_06_0116 - 25719030-25719458,25720138-25720301,25720390-257206... 41 0.001
02_02_0157 - 7280335-7280541,7280656-7280762,7280918-7281097,728... 40 0.002
01_06_0675 + 31092877-31092916,31093349-31093503,31093570-310936... 39 0.004
02_05_0540 + 29852109-29852195,29852304-29852477,29852585-298528... 36 0.050
02_04_0414 - 22685981-22686178,22686374-22686465,22686580-226866... 32 0.47
01_05_0108 + 18183250-18183336,18183451-18183962,18184074-181842... 32 0.47
01_05_0687 + 24288648-24292746,24293737-24293844,24294333-242944... 31 1.1
05_01_0035 - 232656-232781,233212-233322,233419-233563,233749-23... 31 1.4
04_04_0179 - 23342764-23342973,23343185-23343340,23343535-233435... 30 1.9
01_01_0654 + 4990513-4990597,4991806-4991878,4991959-4992058,499... 30 1.9
11_05_0065 + 18766566-18766576,18767023-18767083,18767170-187672... 30 2.5
03_02_0712 - 10600147-10600196,10600257-10600378,10600993-106014... 29 5.8
09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361 28 7.6
08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,287... 28 7.6
>01_01_0997 +
7884974-7885043,7885689-7885975,7886056-7886311,
7886455-7886537,7886634-7886687,7887941-7888012,
7889093-7889155,7889274-7889324,7889432-7889513,
7889606-7889701,7889774-7889944,7890024-7890130,
7890229-7890326,7890798-7891048,7891235-7891398,
7891689-7891979,7892067-7892377,7892477-7892655,
7893231-7893301
Length = 918
Score = 47.6 bits (108), Expect = 1e-05
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Frame = +3
Query: 60 QEQEVLTWISDVLG----EPLPNGA-YEDVLRDGVILCKLANKLAPGSVKKI-------Q 203
+ + TW+ V+G P+ + +R+G++LCK NK+ PG+V K+
Sbjct: 26 RRHQAATWLESVIGPFGLSRCPSEQEFVAAVRNGIVLCKAINKIQPGAVPKVVANASCDS 85
Query: 204 ERGTNFQLMENIQRFQAAIKKYGVPEEEIFQTADLFERRNI 326
+ T FQ ENI+ F A+++ +P F+ +DL E+ NI
Sbjct: 86 QPSTAFQYFENIRNFLVAVQELKLP---CFEASDL-EKDNI 122
>11_06_0689 -
26294961-26294976,26295271-26295414,26295506-26295909,
26296112-26296261,26296334-26296497,26296526-26296836,
26296948-26297084,26297276-26297416,26297821-26297867,
26297977-26298072,26298168-26298249,26298332-26298472,
26298607-26298702,26298809-26298877,26298959-26299030,
26299201-26299368,26299577-26299711,26299792-26299958,
26301213-26301369
Length = 898
Score = 41.5 bits (93), Expect = 8e-04
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Frame = +3
Query: 135 LRDGVILCKLANKLAPGSVKKIQERGTN---------FQLMENIQRFQAAIKKYGVPEEE 287
LR+G++LC NK+ PGSV K+ E ++ +Q EN++ F ++ G+P
Sbjct: 88 LRNGIVLCNALNKVQPGSVPKVVEAPSDSADGAALCAYQYFENVRNFLMGLQDLGLP--- 144
Query: 288 IFQTADLFERRNIPQVTLCLYAL 356
F+ +DL + +V C+ +L
Sbjct: 145 TFEASDLEKGGKGVRVVDCVLSL 167
>05_06_0116 -
25719030-25719458,25720138-25720301,25720390-25720643,
25720727-25720782,25721032-25721169,25721315-25721421,
25721502-25721681,25721757-25721852,25721926-25722007,
25722084-25722425,25722666-25722695,25722788-25722880,
25722963-25723040,25723122-25723222,25723833-25724058,
25724647-25724760,25724855-25725009,25725515-25725554
Length = 894
Score = 40.7 bits (91), Expect = 0.001
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Frame = +3
Query: 57 DQEQEVLTWISDVLGEP-LPNGAYEDVLR----DGVILCKLANKLAPGSVKKI-QERGTN 218
D+ EV+ W++ +L E LP + +D LR DG +LC + N L PG +++ ++
Sbjct: 15 DRRAEVIEWLNALLPEYCLPLDSSDDELRELLSDGTVLCHIVNALIPGVLEESWGAYASS 74
Query: 219 FQLMENIQRFQAAIKKYGVPEEEIFQTADLFERRNIPQVTLCLYAL 356
Q ++++F A + G+P F DL E ++ V CL L
Sbjct: 75 DQHAGHVKKFLAVVADMGLPG---FSVKDL-EEGSMSGVVDCLLVL 116
>02_02_0157 -
7280335-7280541,7280656-7280762,7280918-7281097,
7281182-7281277,7281378-7281459,7281553-7283037,
7283376-7283450,7283521-7283598,7283708-7283791,
7283885-7283965,7284073-7284291,7284398-7284648,
7284748-7284796
Length = 997
Score = 39.9 bits (89), Expect = 0.002
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Frame = +3
Query: 48 RNKDQEQEVLTWISDVLGEPLPNGAYEDV---LRDGVILCKLANKLAPGSVKKIQERGTN 218
R +D +L D+ P P ED+ L G +LC L +L PG++ + + T
Sbjct: 19 RREDVVGWLLALFPDLPLPPPPEATDEDLRAALATGRLLCALLRRLCPGAL--LDDAST- 75
Query: 219 FQLMENIQRFQAAIKKYGVPEEEIFQTADLFERRNIPQVTLCLYAL 356
+N+ RF+AA+++ GV + F +DL ER + V C+ AL
Sbjct: 76 ----DNVGRFRAAVERMGVAK---FSASDL-ERGQMTAVVNCILAL 113
>01_06_0675 +
31092877-31092916,31093349-31093503,31093570-31093677,
31094283-31094487,31094858-31094955,31095052-31095135,
31095227-31095304,31095462-31095554,31095646-31095675,
31095932-31096273,31096353-31096434,31096527-31096622,
31096728-31096907,31097002-31097108,31097207-31097308,
31097611-31097666,31097749-31098002,31098077-31098240,
31098564-31098747,31098825-31098969,31099561-31099661,
31099803-31099870
Length = 923
Score = 39.1 bits (87), Expect = 0.004
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Frame = +3
Query: 57 DQEQEVLTWISDVLGE-PLPNGAYEDVLRD----GVILCKLANKLAPGSVKKIQERGTNF 221
++ EV+ W+ +L E LP + ++ LRD G LC +A+KL PG V + G
Sbjct: 15 NRRAEVIDWLGGLLPEFDLPLDSSDEELRDYLINGEALCYVADKLMPG-VLEGTWGGYAS 73
Query: 222 QLMENIQRFQAAIKKYGVPEEEIFQTADLFERRNIPQVTLCLYAL 356
N+++F + + + G+P F DL E ++ + CL AL
Sbjct: 74 DQRSNVKKFLSVVAEMGLPG---FGVKDL-EEGSMSSIVECLLAL 114
>02_05_0540 +
29852109-29852195,29852304-29852477,29852585-29852841,
29852954-29853125,29853513-29853551,29853647-29853715,
29853795-29853911,29854190-29854401,29854578-29854736,
29854810-29855009,29855100-29855266,29855346-29855442,
29855560-29855651,29855861-29856139
Length = 706
Score = 35.5 bits (78), Expect = 0.050
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3
Query: 102 EPLPNGAYEDVLRDGVILCKLANKLAPGSVKKIQERGTN 218
EP N + D++RDGV+LCKL N PG+ I ER N
Sbjct: 156 EPTDNQLF-DLVRDGVLLCKLINLAVPGT---IDERAIN 190
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 60 QEQEVLTWISDVLGEPLPNGAYEDVLRDGVILCKLANKLAPGSV 191
+E+ WI+ + + N +EDV G +L ++ +K++PGSV
Sbjct: 402 EERSFRMWINSLGVDSYVNNVFEDVRH-GWVLLEVLDKVSPGSV 444
>02_04_0414 -
22685981-22686178,22686374-22686465,22686580-22686676,
22686801-22686916,22687314-22687513,22687588-22687740,
22687960-22688171,22688403-22688519,22688613-22688687,
22688815-22688853,22689518-22689689,22689809-22690056,
22690151-22690324,22690418-22690504
Length = 659
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3
Query: 102 EPLPNGAYEDVLRDGVILCKLANKLAPGSVKKIQERGTN 218
+P N + +++RDGV+LCKL N PG+ I ER N
Sbjct: 153 DPSTNDIF-NLVRDGVLLCKLINVAVPGT---IDERAIN 187
>01_05_0108 +
18183250-18183336,18183451-18183962,18184074-18184245,
18184984-18185022,18185117-18185185,18185281-18185397,
18185842-18186056,18187085-18187240,18187328-18187527,
18187927-18188084,18188321-18188417,18188738-18188829,
18189018-18189191
Length = 695
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 60 QEQEVLTWISDVLGEPLPNGAYEDVLRDGVILCKLANKLAPGSV 191
+E+ WI+ + N +ED LR+G +L ++ +K+APGSV
Sbjct: 429 EERSFRLWINSLGISTYINNVFED-LRNGWVLLEVIDKIAPGSV 471
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 138 RDGVILCKLANKLAPGSVKKIQERGTNFQLMENI 239
+DGV+LCKL N PG+ I ER N + + N+
Sbjct: 194 KDGVLLCKLINLAVPGT---IDERAINTKKLLNL 224
>01_05_0687 +
24288648-24292746,24293737-24293844,24294333-24294442,
24295208-24295282
Length = 1463
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = +1
Query: 358 EELLKNIPSLQDLS*DLKWLIRTNVPSRKNNFGPTTLNLTSKWASIRAPPSPVMVASVTP 537
EE ++++PS + L + I PS N P N S W + P PV V P
Sbjct: 814 EEAVESVPSSEALDVEKPASITQAEPSSPNTPPPGFENFKSSWLPLPTTPPPVETTDVLP 873
>05_01_0035 - 232656-232781,233212-233322,233419-233563,233749-233882,
234341-234412,234485-234548,234632-234699,234894-235129,
236857-237166,237495-238460,238752-238931,239041-239346,
239593-239727,239810-240046,240120-240308,240521-240709,
240929-241024,241117-241323,241700-241893,242979-243216
Length = 1400
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = -3
Query: 625 KSFNQILPFTNTDINVENIGKNLEAIYMWRVLPKPP*PDWEAPLLKPIWRLSSALWARSC 446
K FN+ L + N+G + A +W+VL K DWE K +W++ S A
Sbjct: 1225 KEFNKALDLLKSS----NLGDKM-AEDIWQVLAKAKYQDWEIHSTKRVWKMQSLKEACE- 1278
Query: 445 SSVKVRSFLSAIL 407
++++ FLS L
Sbjct: 1279 NALQEHHFLSGTL 1291
>04_04_0179 -
23342764-23342973,23343185-23343340,23343535-23343593,
23344150-23344226,23344309-23344587,23344800-23344885,
23344960-23345027,23345721-23345904,23346071-23346204,
23346776-23347039,23347613-23347677,23347833-23348407,
23348501-23348680,23348765-23348928,23349008-23349261,
23349405-23349562,23349808-23349948,23350176-23350282,
23350651-23350737,23350812-23350901,23350974-23351055,
23351370-23351561,23351748-23351816,23351959-23352294,
23352694-23352837,23352963-23353126,23353817-23353883
Length = 1463
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 135 LRDGVILCKLANKLAPGSVKKIQE 206
LR+G++LC + N + PG+V K+ E
Sbjct: 57 LRNGLVLCNVLNHVNPGAVPKVVE 80
>01_01_0654 +
4990513-4990597,4991806-4991878,4991959-4992058,
4992719-4992868
Length = 135
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 448 NFGPTTLNLTSKWASIRAPPSPVMVASVTP 537
N GP + WAS+R PSP+ +A P
Sbjct: 68 NSGPKIIGPKGPWASLRQKPSPIFLAGNEP 97
>11_05_0065 +
18766566-18766576,18767023-18767083,18767170-18767268,
18767346-18767467,18767577-18767673,18767778-18767824,
18768020-18768203,18768349-18768400,18768795-18768985,
18769072-18770020,18770866-18771022,18771134-18771206,
18771292-18771465,18771880-18771993,18772110-18772236,
18772331-18772443,18772614-18772729,18772847-18773000
Length = 946
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 225 LMENIQRFQAAIKKYGVPEEEIFQTADLFERRNIPQVTLC-LYALGRITQ 371
L E ++ + + Y + ++ + Q LF R++ Q+ LC LY + +++Q
Sbjct: 693 LCERLRHEELTVSVYNIFKQILDQQTALFFNRHVDQIILCCLYGVAKVSQ 742
>03_02_0712 -
10600147-10600196,10600257-10600378,10600993-10601489,
10601663-10601851,10601936-10602099,10602193-10602446,
10602535-10602691,10602830-10602995,10603121-10603227,
10603305-10603478,10603594-10603689,10603781-10603862,
10603948-10604058,10604253-10604309,10604638-10604709,
10604799-10605041,10605195-10605341,10605381-10605616,
10605745-10605865
Length = 1014
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 219 FQLMENIQRFQAAIKKYGVPEEEIFQTADLFERRNIPQVTLCLYAL 356
FQ EN++ F A ++ G+P F+ +DL + +V C+ AL
Sbjct: 140 FQYFENVRNFLVAAQEIGLP---CFEASDLEQGGKSARVVNCVLAL 182
>09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361
Length = 504
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 456 AHNAELNLQMGFNKGASQSGHGGFG 530
AHN EL L FN G + + GG G
Sbjct: 295 AHNLELQLMPPFNAGGAAAAPGGMG 319
>08_01_0321 +
2872609-2873027,2873477-2873905,2874743-2874944,
2875909-2875947,2876309-2876354,2877380-2877922,
2878827-2880847,2880972-2881215,2881642-2881684,
2881923-2881962,2883580-2883675,2883712-2883759,
2883964-2884290
Length = 1498
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 510 SGHGGFGNTRHM*IASKFFPIFSTLIS 590
SGHGG G T+ A F+P+ + L+S
Sbjct: 433 SGHGGGGATKEAATAVAFYPVCAELLS 459
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,631,478
Number of Sequences: 37544
Number of extensions: 521464
Number of successful extensions: 1450
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1449
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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