Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30086X
         (557 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   1.3  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   1.7  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   5.1  
Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...    23   6.8  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = -2

Query: 547  HQQVPRQGTRGFCSERSQPGAPALAPRPC*RLGHL 443
            HQQ  R+G  G   ER +   P LA  P  R G L
Sbjct: 1104 HQQDERRGVEGGDIERGESVYPELASSPNNRQGGL 1138


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 486 PQRSRPALADGLGTFPP 436
           P  SR A ADG+G+ PP
Sbjct: 769 PSPSRSAFADGIGSPPP 785


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 13/54 (24%), Positives = 20/54 (37%)
 Frame = -1

Query: 215  TLLIFIYIIYYRGVCIESASECVGCTCAREHRRDTPPTSAPHTRTCTPRTLHLT 54
            T+ +  +I+  R V   +   CV CT  R      P    P  R    R   ++
Sbjct: 1372 TMQLRFWIVGARNVAKRTVFNCVKCTRCRPKLIQQPMADLPEQRVRQARPFSIS 1425


>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 101 RWGACLGGARARTCIRRTRSHSR 169
           R+   +GG+R    +RR R H R
Sbjct: 179 RYSQTIGGSRRAAGVRRNRLHLR 201


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 520,348
Number of Sequences: 2352
Number of extensions: 10250
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)