BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV30086X (557 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X53155-4|CAA37311.1| 1201|Drosophila melanogaster muscle myosin ... 42 6e-04 X53155-3|CAA37310.1| 1201|Drosophila melanogaster muscle myosin ... 42 6e-04 M61229-2|AAA28686.1| 1962|Drosophila melanogaster myosin heavy c... 42 6e-04 M61229-1|AAA28687.1| 1962|Drosophila melanogaster myosin heavy c... 42 6e-04 M13360-1|AAA28708.1| 189|Drosophila melanogaster protein ( D.me... 42 6e-04 AE014134-2776|AAN10967.1| 1962|Drosophila melanogaster CG17927-P... 42 6e-04 AE014134-2775|AAN10966.1| 1962|Drosophila melanogaster CG17927-P... 42 6e-04 AE014134-2774|AAN10965.1| 1962|Drosophila melanogaster CG17927-P... 42 6e-04 AE014134-2773|AAN10964.1| 1962|Drosophila melanogaster CG17927-P... 42 6e-04 AE014134-2772|AAN10963.1| 1962|Drosophila melanogaster CG17927-P... 42 6e-04 AE014134-2771|AAN10962.1| 1962|Drosophila melanogaster CG17927-P... 42 6e-04 AE014134-2770|AAF53566.3| 1960|Drosophila melanogaster CG17927-P... 42 6e-04 AE014134-2769|AAN10961.1| 1962|Drosophila melanogaster CG17927-P... 42 6e-04 AE014134-2768|AAN10960.1| 1962|Drosophila melanogaster CG17927-P... 42 6e-04 AE014134-2767|AAN10959.1| 1962|Drosophila melanogaster CG17927-P... 42 6e-04 M12741-1|AAA28705.1| 95|Drosophila melanogaster MHC protein. 31 1.1 AE014296-906|AAF47944.1| 1301|Drosophila melanogaster CG13708-PA... 28 9.8 >X53155-4|CAA37311.1| 1201|Drosophila melanogaster muscle myosin heavy chain protein. Length = 1201 Score = 41.9 bits (94), Expect = 6e-04 Identities = 27/50 (54%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -3 Query: 555 EQAISKFXXXXXXXXXXXGVSPAPQRS--RPALADGLGTFPPRFDLAPED 412 EQAISKF G SPAP+ + RP DGL FPPRFDLAPE+ Sbjct: 1152 EQAISKFRAKGRAGSVGRGASPAPRATSVRPQF-DGLA-FPPRFDLAPEN 1199 >X53155-3|CAA37310.1| 1201|Drosophila melanogaster muscle myosin heavy chain protein. Length = 1201 Score = 41.9 bits (94), Expect = 6e-04 Identities = 27/50 (54%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -3 Query: 555 EQAISKFXXXXXXXXXXXGVSPAPQRS--RPALADGLGTFPPRFDLAPED 412 EQAISKF G SPAP+ + RP DGL FPPRFDLAPE+ Sbjct: 1152 EQAISKFRAKGRAGSVGRGASPAPRATSVRPQF-DGLA-FPPRFDLAPEN 1199 >M61229-2|AAA28686.1| 1962|Drosophila melanogaster myosin heavy chain protein. Length = 1962 Score = 41.9 bits (94), Expect = 6e-04 Identities = 27/50 (54%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -3 Query: 555 EQAISKFXXXXXXXXXXXGVSPAPQRS--RPALADGLGTFPPRFDLAPED 412 EQAISKF G SPAP+ + RP DGL FPPRFDLAPE+ Sbjct: 1913 EQAISKFRAKGRAGSVGRGASPAPRATSVRPQF-DGLA-FPPRFDLAPEN 1960 >M61229-1|AAA28687.1| 1962|Drosophila melanogaster myosin heavy chain protein. Length = 1962 Score = 41.9 bits (94), Expect = 6e-04 Identities = 27/50 (54%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -3 Query: 555 EQAISKFXXXXXXXXXXXGVSPAPQRS--RPALADGLGTFPPRFDLAPED 412 EQAISKF G SPAP+ + RP DGL FPPRFDLAPE+ Sbjct: 1913 EQAISKFRAKGRAGSVGRGASPAPRATSVRPQF-DGLA-FPPRFDLAPEN 1960 >M13360-1|AAA28708.1| 189|Drosophila melanogaster protein ( D.melanogaster larvaland adult thoracic muscle myosin heavy chain gene, 3'end. ). Length = 189 Score = 41.9 bits (94), Expect = 6e-04 Identities = 27/50 (54%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -3 Query: 555 EQAISKFXXXXXXXXXXXGVSPAPQRS--RPALADGLGTFPPRFDLAPED 412 EQAISKF G SPAP+ + RP DGL FPPRFDLAPE+ Sbjct: 140 EQAISKFRAKGRAGSVGRGASPAPRATSVRPQF-DGLA-FPPRFDLAPEN 187 >AE014134-2776|AAN10967.1| 1962|Drosophila melanogaster CG17927-PB, isoform B protein. Length = 1962 Score = 41.9 bits (94), Expect = 6e-04 Identities = 27/50 (54%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -3 Query: 555 EQAISKFXXXXXXXXXXXGVSPAPQRS--RPALADGLGTFPPRFDLAPED 412 EQAISKF G SPAP+ + RP DGL FPPRFDLAPE+ Sbjct: 1913 EQAISKFRAKGRAGSVGRGASPAPRATSVRPQF-DGLA-FPPRFDLAPEN 1960 >AE014134-2775|AAN10966.1| 1962|Drosophila melanogaster CG17927-PH, isoform H protein. Length = 1962 Score = 41.9 bits (94), Expect = 6e-04 Identities = 27/50 (54%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -3 Query: 555 EQAISKFXXXXXXXXXXXGVSPAPQRS--RPALADGLGTFPPRFDLAPED 412 EQAISKF G SPAP+ + RP DGL FPPRFDLAPE+ Sbjct: 1913 EQAISKFRAKGRAGSVGRGASPAPRATSVRPQF-DGLA-FPPRFDLAPEN 1960 >AE014134-2774|AAN10965.1| 1962|Drosophila melanogaster CG17927-PI, isoform I protein. Length = 1962 Score = 41.9 bits (94), Expect = 6e-04 Identities = 27/50 (54%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -3 Query: 555 EQAISKFXXXXXXXXXXXGVSPAPQRS--RPALADGLGTFPPRFDLAPED 412 EQAISKF G SPAP+ + RP DGL FPPRFDLAPE+ Sbjct: 1913 EQAISKFRAKGRAGSVGRGASPAPRATSVRPQF-DGLA-FPPRFDLAPEN 1960 >AE014134-2773|AAN10964.1| 1962|Drosophila melanogaster CG17927-PA, isoform A protein. Length = 1962 Score = 41.9 bits (94), Expect = 6e-04 Identities = 27/50 (54%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -3 Query: 555 EQAISKFXXXXXXXXXXXGVSPAPQRS--RPALADGLGTFPPRFDLAPED 412 EQAISKF G SPAP+ + RP DGL FPPRFDLAPE+ Sbjct: 1913 EQAISKFRAKGRAGSVGRGASPAPRATSVRPQF-DGLA-FPPRFDLAPEN 1960 >AE014134-2772|AAN10963.1| 1962|Drosophila melanogaster CG17927-PD, isoform D protein. Length = 1962 Score = 41.9 bits (94), Expect = 6e-04 Identities = 27/50 (54%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -3 Query: 555 EQAISKFXXXXXXXXXXXGVSPAPQRS--RPALADGLGTFPPRFDLAPED 412 EQAISKF G SPAP+ + RP DGL FPPRFDLAPE+ Sbjct: 1913 EQAISKFRAKGRAGSVGRGASPAPRATSVRPQF-DGLA-FPPRFDLAPEN 1960 >AE014134-2771|AAN10962.1| 1962|Drosophila melanogaster CG17927-PF, isoform F protein. Length = 1962 Score = 41.9 bits (94), Expect = 6e-04 Identities = 27/50 (54%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -3 Query: 555 EQAISKFXXXXXXXXXXXGVSPAPQRS--RPALADGLGTFPPRFDLAPED 412 EQAISKF G SPAP+ + RP DGL FPPRFDLAPE+ Sbjct: 1913 EQAISKFRAKGRAGSVGRGASPAPRATSVRPQF-DGLA-FPPRFDLAPEN 1960 >AE014134-2770|AAF53566.3| 1960|Drosophila melanogaster CG17927-PJ, isoform J protein. Length = 1960 Score = 41.9 bits (94), Expect = 6e-04 Identities = 27/50 (54%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -3 Query: 555 EQAISKFXXXXXXXXXXXGVSPAPQRS--RPALADGLGTFPPRFDLAPED 412 EQAISKF G SPAP+ + RP DGL FPPRFDLAPE+ Sbjct: 1911 EQAISKFRAKGRAGSVGRGASPAPRATSVRPQF-DGLA-FPPRFDLAPEN 1958 >AE014134-2769|AAN10961.1| 1962|Drosophila melanogaster CG17927-PE, isoform E protein. Length = 1962 Score = 41.9 bits (94), Expect = 6e-04 Identities = 27/50 (54%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -3 Query: 555 EQAISKFXXXXXXXXXXXGVSPAPQRS--RPALADGLGTFPPRFDLAPED 412 EQAISKF G SPAP+ + RP DGL FPPRFDLAPE+ Sbjct: 1913 EQAISKFRAKGRAGSVGRGASPAPRATSVRPQF-DGLA-FPPRFDLAPEN 1960 >AE014134-2768|AAN10960.1| 1962|Drosophila melanogaster CG17927-PG, isoform G protein. Length = 1962 Score = 41.9 bits (94), Expect = 6e-04 Identities = 27/50 (54%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -3 Query: 555 EQAISKFXXXXXXXXXXXGVSPAPQRS--RPALADGLGTFPPRFDLAPED 412 EQAISKF G SPAP+ + RP DGL FPPRFDLAPE+ Sbjct: 1913 EQAISKFRAKGRAGSVGRGASPAPRATSVRPQF-DGLA-FPPRFDLAPEN 1960 >AE014134-2767|AAN10959.1| 1962|Drosophila melanogaster CG17927-PC, isoform C protein. Length = 1962 Score = 41.9 bits (94), Expect = 6e-04 Identities = 27/50 (54%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -3 Query: 555 EQAISKFXXXXXXXXXXXGVSPAPQRS--RPALADGLGTFPPRFDLAPED 412 EQAISKF G SPAP+ + RP DGL FPPRFDLAPE+ Sbjct: 1913 EQAISKFRAKGRAGSVGRGASPAPRATSVRPQF-DGLA-FPPRFDLAPEN 1960 >M12741-1|AAA28705.1| 95|Drosophila melanogaster MHC protein. Length = 95 Score = 31.1 bits (67), Expect = 1.1 Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = -3 Query: 543 SKFXXXXXXXXXXXGVSPAPQR-SRPALADGLGTFPPRFDLAPED 412 SKF G SPAP+ S + DGL FPP FDLAPE+ Sbjct: 50 SKFRAKERAGSVGRGASPAPRATSVRSQFDGLA-FPPTFDLAPEN 93 >AE014296-906|AAF47944.1| 1301|Drosophila melanogaster CG13708-PA protein. Length = 1301 Score = 27.9 bits (59), Expect = 9.8 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +2 Query: 269 FGLQKKKNCIFSILQFFAHHQQLMYKK 349 +GL+K K+ + S LQ H QQL+ ++ Sbjct: 365 YGLEKSKSFVSSSLQAMKHQQQLIQRR 391 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,135,095 Number of Sequences: 53049 Number of extensions: 450245 Number of successful extensions: 1865 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 1652 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1850 length of database: 24,988,368 effective HSP length: 81 effective length of database: 20,691,399 effective search space used: 2151905496 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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