Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30085X
(441 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 120 4e-28
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 120 4e-28
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 119 9e-28
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 119 1e-27
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 118 2e-27
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 118 3e-27
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 118 3e-27
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 116 6e-27
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 104 4e-23
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 59 2e-09
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 52 3e-07
12_02_1282 + 27528159-27529148,27529549-27529614 48 3e-06
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 46 1e-05
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 45 3e-05
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 44 5e-05
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 35 0.033
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 31 0.54
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 30 0.72
03_06_0429 - 33863848-33864237,33864396-33864506,33864857-338649... 27 8.8
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 120 bits (290), Expect = 4e-28
Identities = 53/59 (89%), Positives = 58/59 (98%)
Frame = -3
Query: 439 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 263
ITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 319 ITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHRKCF 377
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 120 bits (290), Expect = 4e-28
Identities = 53/59 (89%), Positives = 58/59 (98%)
Frame = -3
Query: 439 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 263
ITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 319 ITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHRKCF 377
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 119 bits (287), Expect = 9e-28
Identities = 53/59 (89%), Positives = 57/59 (96%)
Frame = -3
Query: 439 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 263
ITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct: 322 ITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPAIVHRKCF 380
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 119 bits (286), Expect = 1e-27
Identities = 53/59 (89%), Positives = 57/59 (96%)
Frame = -3
Query: 439 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 263
ITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct: 316 ITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 374
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 118 bits (284), Expect = 2e-27
Identities = 52/59 (88%), Positives = 57/59 (96%)
Frame = -3
Query: 439 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 263
ITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 319 ITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 118 bits (283), Expect = 3e-27
Identities = 52/59 (88%), Positives = 57/59 (96%)
Frame = -3
Query: 439 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 263
IT+LAPS++K+K+IAPPERKYSVWIGGSILASLSTFQQMWISK EYDESGPGIVH KCF
Sbjct: 318 ITSLAPSSMKVKVIAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPGIVHMKCF 376
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 118 bits (283), Expect = 3e-27
Identities = 52/59 (88%), Positives = 56/59 (94%)
Frame = -3
Query: 439 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 263
ITALAP ++KIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPGIVH KCF
Sbjct: 318 ITALAPGSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPGIVHMKCF 376
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 116 bits (280), Expect = 6e-27
Identities = 51/59 (86%), Positives = 57/59 (96%)
Frame = -3
Query: 439 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 263
ITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWIS+ EY+ESGP IVHRKCF
Sbjct: 319 ITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEESGPAIVHRKCF 377
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 104 bits (249), Expect = 4e-23
Identities = 53/73 (72%), Positives = 57/73 (78%), Gaps = 14/73 (19%)
Frame = -3
Query: 439 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ--------------QMWISKEEY 302
ITALAPS++KIK++APPERKYSVWIGGSILASLSTFQ QMWISK EY
Sbjct: 319 ITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVNLTPTLYEVARMQMWISKGEY 378
Query: 301 DESGPGIVHRKCF 263
DESGP IVHRKCF
Sbjct: 379 DESGPAIVHRKCF 391
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 58.8 bits (136), Expect = 2e-09
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = -3
Query: 436 TALAPSTIKIKIIAPPE-RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 263
+A+ PS +K P +YS W+GG+ILA + Q ++K +YDE+GP IVH+KCF
Sbjct: 340 SAICPSLVKPPEYMPENLARYSAWLGGAILAKVVFPQNQHVTKGDYDETGPSIVHKKCF 398
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 51.6 bits (118), Expect = 3e-07
Identities = 23/39 (58%), Positives = 31/39 (79%), Gaps = 3/39 (7%)
Frame = -3
Query: 412 KIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKEE 305
++K++A ER++SVWIGGSILASL +FQQMW SK +
Sbjct: 431 RVKVLASGNSVERRFSVWIGGSILASLGSFQQMWFSKAD 469
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 48.0 bits (109), Expect = 3e-06
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = -3
Query: 352 LASLSTFQQMWISKEEYDESGPGIVHRKCF 263
LA S +MWI+K EYDESGP IVHRKCF
Sbjct: 322 LAPSSMKIKMWIAKAEYDESGPSIVHRKCF 351
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 46.4 bits (105), Expect = 1e-05
Identities = 18/45 (40%), Positives = 31/45 (68%)
Frame = -3
Query: 415 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 281
I++ +++ P ++Y+VW GGS+LAS + F + +K EY+E G I
Sbjct: 418 IEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASI 462
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 44.8 bits (101), Expect = 3e-05
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = -3
Query: 430 LAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 263
L P ++KIIA + W GGS+LA F+ M I+K EY+E G R+ F
Sbjct: 373 LVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRRRFF 428
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 44.0 bits (99), Expect = 5e-05
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = -3
Query: 415 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 281
+++ ++A P + Y+ W GGS+ AS F + +KEEY+E G I
Sbjct: 385 VEVNVVAHPIQSYAAWFGGSVAASNPEFYESCHTKEEYEEHGASI 429
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 34.7 bits (76), Expect = 0.033
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = -3
Query: 409 IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKEEYDE----SGPGIVH 275
I++I PP S W G +++++STF + W I K+++ + +GP V+
Sbjct: 433 IRVIPPPFGTDSAWFGAKMISNVSTFTEAWCIKKKQFRQKTRRNGPSFVN 482
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 30.7 bits (66), Expect = 0.54
Identities = 10/25 (40%), Positives = 20/25 (80%)
Frame = -3
Query: 415 IKIKIIAPPERKYSVWIGGSILASL 341
++++I PP RK+ V++GG++LA +
Sbjct: 366 LRLRIEDPPRRKHMVYLGGAVLAGI 390
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 30.3 bits (65), Expect = 0.72
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = -3
Query: 439 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRK 269
I P +K++ + W G + A+ S F + S +Y E G + HRK
Sbjct: 646 IRQFRPYLSPLKLVRAADPLIDAWRGAAAFAASSKFGRHTFSLADYREHGENLFHRK 702
>03_06_0429 -
33863848-33864237,33864396-33864506,33864857-33864904,
33865666-33865785
Length = 222
Score = 26.6 bits (56), Expect = 8.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 269 LAVDDAGAGLVVFLLRDPHLLEGGQGSQDGSTD 367
L +DD+ A V DP+ GG+ QDG+T+
Sbjct: 107 LKIDDSSAAEVD--ANDPYTQSGGKNKQDGNTN 137
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,540,590
Number of Sequences: 37544
Number of extensions: 208076
Number of successful extensions: 507
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 835800280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -