Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30085X
(441 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 120 3e-28
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 120 3e-28
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 120 6e-28
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 118 2e-27
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 118 2e-27
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 118 2e-27
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 118 2e-27
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 118 2e-27
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 103 7e-23
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 102 1e-22
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 94 3e-20
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 77 5e-15
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 72 2e-13
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 59 2e-09
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 44 5e-05
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 43 8e-05
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 42 2e-04
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 28 2.4
At5g43500.2 68418.m05318 expressed protein 27 7.4
At5g43500.1 68418.m05319 expressed protein 27 7.4
At5g07240.1 68418.m00826 calmodulin-binding family protein conta... 26 9.8
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 120 bits (290), Expect = 3e-28
Identities = 53/59 (89%), Positives = 58/59 (98%)
Frame = -3
Query: 439 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 263
ITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GPGIVHRKCF
Sbjct: 319 ITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 120 bits (290), Expect = 3e-28
Identities = 53/59 (89%), Positives = 58/59 (98%)
Frame = -3
Query: 439 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 263
ITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GPGIVHRKCF
Sbjct: 319 ITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 120 bits (288), Expect = 6e-28
Identities = 53/59 (89%), Positives = 57/59 (96%)
Frame = -3
Query: 439 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 263
ITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct: 319 ITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKSEYDESGPSIVHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 118 bits (284), Expect = 2e-27
Identities = 52/59 (88%), Positives = 57/59 (96%)
Frame = -3
Query: 439 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 263
ITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 319 ITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 118 bits (284), Expect = 2e-27
Identities = 52/59 (88%), Positives = 57/59 (96%)
Frame = -3
Query: 439 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 263
ITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 319 ITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 118 bits (284), Expect = 2e-27
Identities = 52/59 (88%), Positives = 57/59 (96%)
Frame = -3
Query: 439 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 263
ITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 319 ITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 118 bits (284), Expect = 2e-27
Identities = 52/59 (88%), Positives = 57/59 (96%)
Frame = -3
Query: 439 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 263
ITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 319 ITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 118 bits (284), Expect = 2e-27
Identities = 52/59 (88%), Positives = 57/59 (96%)
Frame = -3
Query: 439 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 263
ITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 319 ITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 103 bits (246), Expect = 7e-23
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = -3
Query: 439 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 263
I ALA + ++IKI+APPERKYSVWIGGSILASLST++QMWI+K EY+E+GP IVH KCF
Sbjct: 271 INALAAANMRIKIVAPPERKYSVWIGGSILASLSTYEQMWITKAEYEENGPAIVHTKCF 329
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 102 bits (244), Expect = 1e-22
Identities = 44/59 (74%), Positives = 51/59 (86%)
Frame = -3
Query: 439 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 263
I ALAP ++KIK++APPERKYSVW+GGSILASLS+F MWI+K EYDE G IVHRKCF
Sbjct: 320 INALAPPSMKIKVVAPPERKYSVWVGGSILASLSSFAPMWITKAEYDEQGGAIVHRKCF 378
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 94.3 bits (224), Expect = 3e-20
Identities = 39/58 (67%), Positives = 49/58 (84%)
Frame = -3
Query: 439 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKC 266
+ AL PS++K+K++ PPE + SVWIGGSILASLSTF QMWI+K+EY+E G IVHRKC
Sbjct: 308 LNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQMWITKDEYEEHGAAIVHRKC 365
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 77.0 bits (181), Expect = 5e-15
Identities = 35/43 (81%), Positives = 41/43 (95%)
Frame = -3
Query: 439 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 311
ITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQ+ I +
Sbjct: 319 ITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVKIDQ 361
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 72.1 bits (169), Expect = 2e-13
Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 3/57 (5%)
Frame = -3
Query: 427 APSTIKIKIIAP---PERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKC 266
+P + ++K++A ER++SVWIGGSILASL +FQQMW SK EY+E G + RKC
Sbjct: 384 SPHSARVKVLASGNTTERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 58.8 bits (136), Expect = 2e-09
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 6/62 (9%)
Frame = -3
Query: 430 LAPSTIKIKIIAPPERK------YSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRK 269
L S I+ ++ PPE YS W+GG+ILA + Q ++K +YDE+GP +VHRK
Sbjct: 302 LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKVVFPQNQHVTKADYDETGPSVVHRK 361
Query: 268 CF 263
CF
Sbjct: 362 CF 363
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 44.0 bits (99), Expect = 5e-05
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = -3
Query: 430 LAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 263
L P +KI + VW GGS+LAS F+ M ++K EY+E G R+ F
Sbjct: 365 LVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEYEELGSARCRRRFF 420
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 43.2 bits (97), Expect = 8e-05
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = -3
Query: 415 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 281
+++ +++ P ++++VW GGS+L+S F +KEEY+E G I
Sbjct: 372 VEVNVVSHPVQRFAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 41.5 bits (93), Expect = 2e-04
Identities = 16/43 (37%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = -3
Query: 415 IKIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKEEYDESG 290
++++I PP RK+ V++GG++LA + + WI++E+Y E G
Sbjct: 337 LRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWINREDYMEEG 379
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = -3
Query: 424 PSTIK--IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKEEY 302
PS+I I++I PP + W G ++++LS F W I+++++
Sbjct: 420 PSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGPWCITRKQF 463
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 26.6 bits (56), Expect = 7.4
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -3
Query: 388 ERKYSVWIGGSILASLSTFQQMWISKEEYDESG 290
E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 527 EPQFVTWKGGAILGILDFGREAWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 26.6 bits (56), Expect = 7.4
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -3
Query: 388 ERKYSVWIGGSILASLSTFQQMWISKEEYDESG 290
E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 539 EPQFVTWKGGAILGILDFGREAWIERHQWMVNG 571
>At5g07240.1 68418.m00826 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 401
Score = 26.2 bits (55), Expect = 9.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -2
Query: 425 ALDHQDQDHRSPREEVLRMDRW 360
A+DH +HRSP +D+W
Sbjct: 205 AMDHHHNNHRSPMGSSRLLDQW 226
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,924,385
Number of Sequences: 28952
Number of extensions: 145311
Number of successful extensions: 387
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 386
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 702840360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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