Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30084X
         (319 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817           29   0.79 
03_05_0514 - 25082662-25082669,25082978-25083043,25083903-250840...    29   0.79 
02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416     29   1.0  
11_01_0280 + 2080527-2080673,2081585-2081677,2081767-2081928,208...    28   1.4  
09_02_0082 - 4060018-4061604                                           27   2.4  
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043...    26   5.6  
12_02_0154 + 14494319-14495857                                         25   9.7  

>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
          Length = 883

 Score = 29.1 bits (62), Expect = 0.79
 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = -1

Query: 313 TSPLVMLSPLPHQCLSR-SLVLLPTSP 236
           T+PL + +P PH C+SR    L+PT P
Sbjct: 421 TAPLALRAPAPHLCVSRMPPPLVPTPP 447


>03_05_0514 -
           25082662-25082669,25082978-25083043,25083903-25084017,
           25084769-25084843,25085285-25085338,25085420-25085471,
           25087308-25087447,25087993-25088077,25088358-25088431,
           25088533-25088616,25088617-25088653,25089569-25089872,
           25090371-25090536,25091053-25091076
          Length = 427

 Score = 29.1 bits (62), Expect = 0.79
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 228 NVLGDVGNSTSDLLRHWWGSGDSITSGLV 314
           NV+ + G ST   L  WWGS   ITSG++
Sbjct: 4   NVITEAGISTR--LNQWWGSIPFITSGVI 30


>02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416
          Length = 218

 Score = 28.7 bits (61), Expect = 1.0
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +3

Query: 129 Y*QRQYCFHLFLFIRCKPNPKYVCEIYRLLLERNVLGDVGNSTSDLLRHWWG 284
           Y Q     H FL  RC+  P Y  E+  ++++   +G + +    +LRH  G
Sbjct: 66  YCQEPVVTHDFLNTRCRRRPNY-GEVEEMIMKAAKMGQMSSQIGVVLRHQHG 116


>11_01_0280 +
           2080527-2080673,2081585-2081677,2081767-2081928,
           2082375-2082506,2083136-2083170,2083769-2083868,
           2083990-2084283
          Length = 320

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +3

Query: 183 NPKYVCEI-YRLLLERNVLGDVGNSTSDLLRHWWGSGDSITSG 308
           +P+Y+ E+  ++LLE NV  D+GN     ++H    G  +  G
Sbjct: 111 SPEYLAELTQKILLEINVNEDLGNVLCHEMKHARNEGGQVFEG 153


>09_02_0082 - 4060018-4061604
          Length = 528

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
 Frame = -1

Query: 313 TSPLVMLSPLPHQCLS---RSLVLLPTSP 236
           T+PL + +P PH  +S   RSLVL P +P
Sbjct: 312 TAPLALRTPAPHLRVSRKPRSLVLTPPAP 340



 Score = 25.4 bits (53), Expect = 9.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 310 SPLVMLSPLPHQCLSRSLVLLPTSP 236
           +PL + +P PH C+ R  VL P +P
Sbjct: 153 APLALRAPAPHLCVPR--VLSPPAP 175


>06_03_1014 -
           26902971-26903085,26903182-26903270,26904302-26904380,
           26904488-26904585,26904848-26904952,26905031-26905117,
           26905218-26905412,26905890-26905996,26906559-26906754,
           26906865-26906966,26907100-26907171,26907404-26907505,
           26907638-26907675,26907769-26907880,26907972-26908028,
           26908122-26908177,26908283-26908409,26908856-26908910,
           26908919-26909049
          Length = 640

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -1

Query: 310 SPLVMLSPLPHQCLSRSL 257
           SPL++  PLPH  L RSL
Sbjct: 26  SPLIVFLPLPHVGLDRSL 43


>12_02_0154 + 14494319-14495857
          Length = 512

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 195 VCEIYRLLLERNVLGDVGNSTSDL 266
           +CE   +L  ++V+GDVGNS   L
Sbjct: 247 MCEPKPVLRPKHVIGDVGNSDDPL 270


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,961,937
Number of Sequences: 37544
Number of extensions: 141525
Number of successful extensions: 342
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 342
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 398975940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)