Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30084X
         (319 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    25   0.17 
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    23   0.67 
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    20   8.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    20   8.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   8.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           20   8.3  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 25.4 bits (53), Expect = 0.17
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 311 QPTGNAIPTSPPVP*QIACAVAYIA 237
           Q  G+ IPT+PP+P +I  A+ + A
Sbjct: 97  QVQGSHIPTAPPIPPEIQRALEWNA 121


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 23.4 bits (48), Expect = 0.67
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = -2

Query: 291 PHFPTSALADRLCCCLHRQEH 229
           P  PT    D LC  LH   H
Sbjct: 455 PQLPTEESVDALCNTLHHWHH 475


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 243 HRQEHSSQEVSDKSHRRI 190
           HRQ HS+  +S  ++ R+
Sbjct: 193 HRQRHSTIHLSTGNYSRL 210


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -3

Query: 206 NLTDVFWIRFTPNE 165
           N+  V W R  PNE
Sbjct: 506 NVNSVQWPRLNPNE 519


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +3

Query: 210  RLLLERNVLGDVGNSTSDLLRHWWGSGDS 296
            RL   +NV G VG  T    RH+    DS
Sbjct: 969  RLTFSKNVQGRVGFVTPFEHRHFISGIDS 997


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -3

Query: 206 NLTDVFWIRFTPNE 165
           N+  V W R  PNE
Sbjct: 506 NVNSVQWPRLNPNE 519


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,515
Number of Sequences: 438
Number of extensions: 1753
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6844365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)