Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30082X
(571 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 201 4e-52
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 198 2e-51
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 197 6e-51
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 196 1e-50
SB_56| Best HMM Match : Actin (HMM E-Value=0) 196 1e-50
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 195 2e-50
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 175 2e-44
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 70 1e-12
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 62 2e-10
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 39 0.002
SB_54| Best HMM Match : Actin (HMM E-Value=0) 36 0.023
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 3.5
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 201 bits (490), Expect = 4e-52
Identities = 93/100 (93%), Positives = 96/100 (96%)
Frame = -1
Query: 571 ETVYISIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEIXALAPSTIKIKIIAPPER 392
ET Y SIMKCDVDIRKDLYANTVMSGGTTMYPG+ADRMQKEI ALAPST+KIKIIAPPER
Sbjct: 250 ETTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPER 309
Query: 391 KYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 272
KYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 310 KYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 349
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 198 bits (484), Expect = 2e-51
Identities = 92/100 (92%), Positives = 95/100 (95%)
Frame = -1
Query: 571 ETVYISIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEIXALAPSTIKIKIIAPPER 392
ET Y SIMKCDVDIRKDLYANTV+SGGTTMYPGIADRMQKEI ALAP T+KIKIIAPPER
Sbjct: 239 ETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPER 298
Query: 391 KYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 272
KYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 299 KYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 338
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 197 bits (480), Expect = 6e-51
Identities = 91/100 (91%), Positives = 95/100 (95%)
Frame = -1
Query: 571 ETVYISIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEIXALAPSTIKIKIIAPPER 392
ET Y SIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKEI ALAP T+KIKIIAPPER
Sbjct: 277 ETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPER 336
Query: 391 KYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 272
KYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 337 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 196 bits (477), Expect = 1e-50
Identities = 90/100 (90%), Positives = 95/100 (95%)
Frame = -1
Query: 571 ETVYISIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEIXALAPSTIKIKIIAPPER 392
ET Y SIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKEI +LAP T+KIKIIAPPER
Sbjct: 277 ETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPER 336
Query: 391 KYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 272
KYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 337 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 196 bits (477), Expect = 1e-50
Identities = 90/100 (90%), Positives = 95/100 (95%)
Frame = -1
Query: 571 ETVYISIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEIXALAPSTIKIKIIAPPER 392
ET Y SIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKEI +LAP T+KIKIIAPPER
Sbjct: 276 ETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPER 335
Query: 391 KYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 272
KYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 336 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 195 bits (476), Expect = 2e-50
Identities = 90/100 (90%), Positives = 95/100 (95%)
Frame = -1
Query: 571 ETVYISIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEIXALAPSTIKIKIIAPPER 392
ET Y SIMKCDVDIRKDLYANTV+SGG+TM+PGIADRMQKEI ALAP T+KIKIIAPPER
Sbjct: 276 ETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPER 335
Query: 391 KYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 272
KYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 336 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 175 bits (427), Expect = 2e-44
Identities = 79/100 (79%), Positives = 90/100 (90%)
Frame = -1
Query: 571 ETVYISIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEIXALAPSTIKIKIIAPPER 392
E +Y IMKCDVDIRKDLY+N V+SGG+TM+PGIADRMQKEI LA +++K+K+IAPPER
Sbjct: 50 EAIYNCIMKCDVDIRKDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPER 109
Query: 391 KYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 272
KYSVWIGGSILASLSTFQQMWI+KEEY E GP IVHRKCF
Sbjct: 110 KYSVWIGGSILASLSTFQQMWIAKEEYHEYGPPIVHRKCF 149
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 70.1 bits (164), Expect = 1e-12
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 16/116 (13%)
Frame = -1
Query: 571 ETVYISIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEIXA---------------- 440
E V I C +D+R+ LY N V+SGG+TM+ R+Q++I
Sbjct: 225 EVVDNVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDIKRTVDARLKMSETLSGGR 284
Query: 439 LAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 272
+ P I+ ++I+ ++Y+VW GGS+LAS F + +K +YDE GP I F
Sbjct: 285 IKPKPIETQVISHHMQRYAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF 340
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 62.5 bits (145), Expect = 2e-10
Identities = 27/77 (35%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Frame = -1
Query: 571 ETVYISIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEIXALAPSTIKIKII---AP 401
+ V S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P ++++K+I +
Sbjct: 154 QVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRLKLISNNSS 213
Query: 400 PERKYSVWIGGSILASL 350
E++++ WIGGSILASL
Sbjct: 214 VEKRFNPWIGGSILASL 230
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 53.6 bits (123), Expect = 1e-07
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Frame = -1
Query: 556 SIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEIXALAPST-------IK-IKIIAP 401
S++ C +D RK L N V+ GGT M PG R+ +EI L S IK +K+ P
Sbjct: 65 SLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQP 124
Query: 400 P-ERKYSVWIGGSILASLSTFQQMWISKEEYDE 305
P + W+GG+I SL ++E Y +
Sbjct: 125 PVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 52.4 bits (120), Expect = 3e-07
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 29/120 (24%)
Frame = -1
Query: 571 ETVYISIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEIXAL--------------- 437
E ++ +I D+D R + Y + V+SGG+TMYPG+ R+++EI L
Sbjct: 280 ELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKGDTSKLSS 339
Query: 436 ------APSTI-----KIKI-IAPP-ERKYSVWIGGSILAS-LSTFQQMWISKEEYDESG 299
P T K KI I P RK+ V++GG++LA + W++++EY+E G
Sbjct: 340 GMGMEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/33 (45%), Positives = 25/33 (75%)
Frame = -1
Query: 571 ETVYISIMKCDVDIRKDLYANTVMSGGTTMYPG 473
E + +I K D+D+R+ LY+N V+SGG+T++ G
Sbjct: 259 EVLAFAIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 35.9 bits (79), Expect = 0.023
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = -1
Query: 571 ETVYISIMKCDVDIRKDLYANTVMSG 494
E+++ SI KCD+D+R +L+ N V+SG
Sbjct: 2321 ESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 363 MDPPIHTEYFLSGGAMILILMVEGARAXISFCILSAIPGYMV-VPPD 500
+DPP+ +Y L+GG ++ ++ FCI G++V PP+
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCIFQ---GFVVPTPPE 801
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 511 NTVMSGGTTMYPGIADRMQKEIXALAP 431
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 514 ANTVMSGGTTMYPGIADRMQKEIXALAP-STIKIKIIAPPE 395
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNRLTELGIVKEKIIAPPE 84
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,473,392
Number of Sequences: 59808
Number of extensions: 282953
Number of successful extensions: 853
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1349364063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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