Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30078X
(420 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33554| Best HMM Match : Sushi (HMM E-Value=0.00055) 38 0.004
SB_52009| Best HMM Match : Plasmodium_HRP (HMM E-Value=7.9) 38 0.004
SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.39
SB_57086| Best HMM Match : PT (HMM E-Value=2.4) 31 0.39
SB_8332| Best HMM Match : PDZ (HMM E-Value=1.3e-17) 29 1.2
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_56517| Best HMM Match : CUB (HMM E-Value=0.0011) 28 2.7
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 28 2.7
SB_34661| Best HMM Match : Fz (HMM E-Value=0.00016) 28 2.7
SB_20760| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.7
SB_57005| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_7770| Best HMM Match : Aldolase_II (HMM E-Value=2.6e-12) 27 4.8
SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10) 27 6.3
SB_51293| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_39564| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_23051| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_5515| Best HMM Match : PspA_IM30 (HMM E-Value=0.14) 27 6.3
SB_53613| Best HMM Match : Sugar_tr (HMM E-Value=0.00012) 27 8.3
SB_34943| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_58963| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_37633| Best HMM Match : DUF327 (HMM E-Value=2.1) 27 8.3
>SB_33554| Best HMM Match : Sushi (HMM E-Value=0.00055)
Length = 685
Score = 37.5 bits (83), Expect = 0.004
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = -3
Query: 283 ASTRIDTRAWLMRWIPPSPSWLVSKLSHSTYRPHTYTNRTCTHTYAAPLPHTHKHMYIN- 107
A+TR T+A + P V H+ R T R CT+T+ H H H Y N
Sbjct: 244 ANTRTRTKARKCTYTQPGTQMHVHAPGHANARTRTQA-RKCTYTHPGTQMHVHAHKYANA 302
Query: 106 --YTTTRIHVYT 77
+T TR YT
Sbjct: 303 HTHTQTRKCTYT 314
Score = 30.7 bits (66), Expect = 0.51
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 184 HTYTNRTCTHTYAAPLPHTHKHMYINYTTTRIHVYT 77
H T H YA THK+MY + T++HV+T
Sbjct: 494 HANTRGAPRHAYARTRTQTHKYMY-THPDTQMHVHT 528
Score = 27.5 bits (58), Expect = 4.8
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = -3
Query: 283 ASTRIDTRAWLMRWIPPSPSWLVSKLSHSTYRPHTYTNRTCTHTYAAPLPHTHKHMYINY 104
A+ R T+A + P V ++ HT T R CT+T+ H H + N
Sbjct: 272 ANARTRTQARKCTYTHPGTQMHVHAHKYANAHTHTQT-RKCTYTHPGMQMHVHAPRHAN- 329
Query: 103 TTTR 92
T TR
Sbjct: 330 TCTR 333
>SB_52009| Best HMM Match : Plasmodium_HRP (HMM E-Value=7.9)
Length = 231
Score = 37.5 bits (83), Expect = 0.004
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = -3
Query: 283 ASTRIDTRAWLMRWIPPSPSWLVSKLSHSTYRPHTYTNRTCTHTYAAPLPHTHKHMYIN- 107
A+TR T+A + P V H+ R T R CT+T+ H H H Y N
Sbjct: 19 ANTRTRTKARKCTYTQPGTQMHVHAPGHANARTRTQA-RKCTYTHPGTQMHVHAHKYANA 77
Query: 106 --YTTTRIHVYT 77
+T TR YT
Sbjct: 78 HTHTQTRKCTYT 89
Score = 27.5 bits (58), Expect = 4.8
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = -3
Query: 283 ASTRIDTRAWLMRWIPPSPSWLVSKLSHSTYRPHTYTNRTCTHTYAAPLPHTHKHMYINY 104
A+ R T+A + P V ++ HT T R CT+T+ H H + N
Sbjct: 47 ANARTRTQARKCTYTHPGTQMHVHAHKYANAHTHTQT-RKCTYTHPGMQMHVHAPRHAN- 104
Query: 103 TTTR 92
T TR
Sbjct: 105 TCTR 108
>SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 31.1 bits (67), Expect = 0.39
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 211 KLSHSTYRPHTYTNRTCTHTYAAPLPHTHKHMYINYTTTR 92
K + Y HT+T+ THT+ P TH H + TTR
Sbjct: 391 KYDTTRYSTHTHTHLHDTHTHETPRHDTHLHDTHPHETTR 430
>SB_57086| Best HMM Match : PT (HMM E-Value=2.4)
Length = 226
Score = 31.1 bits (67), Expect = 0.39
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -3
Query: 187 PHTYTNRTCTHTYAAPLPHTHKHMYIN-YTTTRIHVYT 77
PH Y ++ TH Y PH + H Y + YT H YT
Sbjct: 31 PHQYPHQY-THQYTHQYPHQYTHQYTHQYTHQYTHQYT 67
Score = 30.3 bits (65), Expect = 0.68
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -3
Query: 184 HTYTNRTCTHTYAAPLPHTHKHMYIN-YTTTRIHVYT 77
H YT+ TH Y PH + H Y + Y H YT
Sbjct: 88 HQYTHHQYTHQYTHQYPHQYPHQYPHQYPHQYPHQYT 124
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 187 PHTYTNRTCTHTYAAPLPHTHKHMY 113
PH YT++ CTH Y H + H Y
Sbjct: 196 PHQYTHQ-CTHQYTHQYTHQYTHQY 219
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 184 HTYTNRTCTHTYAAPLPHTHKHMYINYTTTRIHVYT 77
H YT++ TH Y P H + H Y ++ T H YT
Sbjct: 68 HQYTHQY-THPYTHPYTHQYTHQYTHHQYT--HQYT 100
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -3
Query: 202 HSTYR-PHTYTNRTCTHTYAAPLPHTHKHMYIN-YTTTRIHVYT 77
H T++ H Y ++ TH Y PH + H Y + YT H YT
Sbjct: 9 HYTHQYTHQYPHQY-THQYTHQYPHQYPHQYTHQYTHQYPHQYT 51
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Frame = -3
Query: 184 HTYTNRTC---THTYAAPLPHTHKHMYIN-YTTTRIHVYT 77
H YT++ TH Y P H + H Y + YT H YT
Sbjct: 161 HQYTHQCTHPYTHQYTHPYTHPYTHPYTHQYTHQYPHQYT 200
Score = 26.6 bits (56), Expect = 8.3
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Frame = -3
Query: 205 SHSTYRPHTYTNR---TCTHTYAAPLPHTHKHMYIN-YTTTRIHVYT 77
+H Y H YT++ H Y PH + H Y + YT H YT
Sbjct: 91 THHQYT-HQYTHQYPHQYPHQYPHQYPHQYPHQYTHQYTHQYTHQYT 136
>SB_8332| Best HMM Match : PDZ (HMM E-Value=1.3e-17)
Length = 1038
Score = 29.5 bits (63), Expect = 1.2
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -3
Query: 193 YRPHTYTNRTCTHTYA--APLPHTHKHMYINYTTTRIHVYT*CNNIY*YFM*IYLRFS 26
YRP+ + RT H Y A + T+ H+Y Y HVY ++Y + +Y ++
Sbjct: 730 YRPYAHVYRTYAHVYRTYARVYRTYAHVYRTYA----HVYRPYAHVYRTYARVYRTYA 783
>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2463
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -3
Query: 196 TYRPHTYTNRTC-THTYAAPLPHTHKHMYINYTT 98
TY H NRTC TH TH+ M YTT
Sbjct: 1368 TYTTHAQMNRTCTTHAQMNRTCTTHEQMNRTYTT 1401
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -3
Query: 196 TYRPHTYTNRTC-THTYAAPLPHTHKHMYINYTT 98
TY H NRTC TH TH+ M YTT
Sbjct: 1338 TYTTHEQMNRTCTTHAKMNRTCTTHEQMNRTYTT 1371
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -3
Query: 196 TYRPHTYTNRTC-THTYAAPLPHTHKHMYINYTT 98
TY H NRTC TH TH+ M YTT
Sbjct: 1428 TYTTHVQMNRTCTTHEQMNRTCTTHEQMNRAYTT 1461
Score = 27.1 bits (57), Expect = 6.3
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -3
Query: 196 TYRPHTYTNRTC-THTYAAPLPHTHKHMYINYTT 98
TY H NRTC TH TH M YTT
Sbjct: 1308 TYITHAQMNRTCTTHAQMNRTYITHAQMNRTYTT 1341
Score = 26.6 bits (56), Expect = 8.3
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -3
Query: 196 TYRPHTYTNRTC-THTYAAPLPHTHKHMYINYTT 98
TY H NRTC TH TH M YTT
Sbjct: 1518 TYTIHAQMNRTCTTHAQMNRTCITHAQMDRTYTT 1551
>SB_56517| Best HMM Match : CUB (HMM E-Value=0.0011)
Length = 734
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 10/53 (18%)
Frame = -3
Query: 205 SHSTYRPHTYTNRTCTHTYAAP--------LPHTHKHMY--INYTTTRIHVYT 77
+HS ++T RT HT++ P + HTH H + +++T T IH ++
Sbjct: 348 THSHSHALSFTPRTVIHTHSHPHALSFTRTIIHTHSHSHHALSFTCTLIHTHS 400
Score = 28.3 bits (60), Expect = 2.7
Identities = 11/37 (29%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -3
Query: 184 HTYTNRTCTHTYAAPLPHTHKH-MYINYTTTRIHVYT 77
HT+++ ++ L HTH H + +++T+T IH ++
Sbjct: 380 HTHSHSHHALSFTCTLIHTHSHSLALSFTSTLIHTHS 416
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -3
Query: 256 WLMRWIPPSPSWLVS--KLSHSTYRPHTYTNRTCTHTYAAPLPHTHKHMY 113
W+++ + PSP L ++ H+ YR H YT ++ +PH H H+Y
Sbjct: 227 WVIQPLVPSPLALAPPWRIIHN-YRHHLYTTVIIYTPPSSSIPHRH-HLY 274
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -3
Query: 193 YRPHTYTNRTCTHTYAAPLPHTHKHMY---INYTTTRIHVYT*CNNIY 59
+R H YT ++P+PH H H+Y I YT ++ C+++Y
Sbjct: 269 HRHHLYTTAIIYTPLSSPIPHRH-HLYTTVIIYTPPSSSIHH-CHHLY 314
>SB_34661| Best HMM Match : Fz (HMM E-Value=0.00016)
Length = 486
Score = 28.3 bits (60), Expect = 2.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -3
Query: 205 SHSTYRPHTYTNRTCTHTYAAPLPHTHKHMYINYTTTR 92
++ T HTY R +HTY HT++ +Y++ TR
Sbjct: 294 TYRTRYSHTYRTRY-SHTYRTRYSHTYRTIYLHTYRTR 330
>SB_20760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 230
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 5/40 (12%)
Frame = -3
Query: 190 RPHTYTNRTCTHTYAAP-----LPHTHKHMYINYTTTRIH 86
R T T T H Y P T +H Y Y TT++H
Sbjct: 99 RQETITPETSRHNYTPKRHDTITPQTSRHNYTRYVTTQLH 138
>SB_57005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 27.9 bits (59), Expect = 3.6
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -3
Query: 208 LSHSTYRPHTYTNRTCTHTYAA-PLPHTHKHMYINYTT--TRIHVY 80
L H+ H+ T CT T+A L HTH MY N T T+ H +
Sbjct: 119 LKHTHTTMHSNTRTLCTQTHARYALKHTHT-MYSNTHTLCTQTHAH 163
>SB_7770| Best HMM Match : Aldolase_II (HMM E-Value=2.6e-12)
Length = 716
Score = 27.5 bits (58), Expect = 4.8
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = -3
Query: 286 SASTRIDTRAWLMRWIPPSPSWLVSKLSHSTYRPHTYTNR 167
S +T TRA L + P S VS+ SHST R +TY NR
Sbjct: 115 SPATTTSTRAQLF-FTPDSDQKGVSR-SHSTGRANTYRNR 152
>SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10)
Length = 968
Score = 27.1 bits (57), Expect = 6.3
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = -3
Query: 235 PSPSWLVSKLSHSTYRPHTYTNRTCTHTYAAPLPHTHKHMYINYTTTRIHVYT 77
PSP+ V H+ YT+ TH Y P + ++ + IH YT
Sbjct: 373 PSPTHRVHTRLHTNLHAQ-YTHAEYTHAYTPSTPKATRLVHPHLHAKYIHAYT 424
Score = 26.6 bits (56), Expect = 8.3
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
Frame = -3
Query: 307 STGSKTRSASTRIDTRAWLMRWIPPSPSWLVSKLSHS--------TYRPHTYTNRTCTHT 152
ST S T TR+ T+ + + P P L ++ +H+ T+R H + THT
Sbjct: 818 STPSPTHRVHTRLHTK-YTHAYTPIHPR-LHAEYTHAYTPSTPKPTHRVHPSLHAGYTHT 875
Query: 151 YAAPLPHTHKHMYINYTTTRIH 86
Y P Y + T R+H
Sbjct: 876 YTPSTPTPTHAEYTHAYTRRVH 897
>SB_51293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 27.1 bits (57), Expect = 6.3
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -3
Query: 253 LMRWIPPSPSWLVSK 209
L +WIP +P WL++K
Sbjct: 92 LWKWIPETPPWLIAK 106
>SB_39564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 279
Score = 27.1 bits (57), Expect = 6.3
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -3
Query: 202 HSTYRPHTYTNRTCTHTYAAPLPHTHKHMYINYTTTRIHVYT 77
HST+ +TYT + T H H+ + TT +H +T
Sbjct: 105 HSTHTLNTYTQQHAHSTRKLHTYTQHAHLTRHSTTRALHTHT 146
>SB_23051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2141
Score = 27.1 bits (57), Expect = 6.3
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -3
Query: 226 SWLVSKLSHSTYRPHTYTNRTCTHTYAAPLPHTHKHMYINYTTTRIHV 83
+W L+ T+ T+ T TH + + THKH+ I T T H+
Sbjct: 416 AWTHKHLTIVTWTHKHLTSGTWTHKHLTIVTRTHKHLTI-VTRTHKHL 462
>SB_5515| Best HMM Match : PspA_IM30 (HMM E-Value=0.14)
Length = 388
Score = 27.1 bits (57), Expect = 6.3
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -2
Query: 404 FKDQLKTLTG*LXXXXXXXXXXXXXXXRLQKEVDRLEDEIGINKDRYKSLADEMD 240
+K Q +TL LQ E+D L +E+ +R +SL DE++
Sbjct: 123 YKQQTETLESLFAAVNHNNENLINENLLLQAELDNLNNELKAKDNRIESLQDELE 177
>SB_53613| Best HMM Match : Sugar_tr (HMM E-Value=0.00012)
Length = 466
Score = 26.6 bits (56), Expect = 8.3
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3
Query: 247 RWIPPSPSWLVS 212
RWIP SP WLV+
Sbjct: 242 RWIPESPRWLVA 253
>SB_34943| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 26.6 bits (56), Expect = 8.3
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -3
Query: 265 TRAWLMRWIPPSPSWLVSKLSHSTYRPHTYTNRTCTHTYAAPLPHTHKHMYINYTTTR-- 92
T+A+ R P + + K +H+ Y YT+ TH Y + H H + T T
Sbjct: 52 TQAYTRRVRPLLHTPVTPKPTHAEYTHAEYTHAEYTHAYTRRV-HPRLHTPVTPTPTHAE 110
Query: 91 -IHVYT 77
H YT
Sbjct: 111 YTHAYT 116
>SB_58963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 187 PHTYTNRTCTHTYAAPLPHT 128
PH + T HTY AP+ HT
Sbjct: 38 PHLHCPYTSHHTYIAPIHHT 57
>SB_37633| Best HMM Match : DUF327 (HMM E-Value=2.1)
Length = 355
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 320 LQKEVDRLEDEIGINKDRYKSLADEMDS 237
+ K V R DE+ K R SLAD+ DS
Sbjct: 47 ISKHVTRQLDEVQATKARRSSLADDWDS 74
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,592,020
Number of Sequences: 59808
Number of extensions: 180518
Number of successful extensions: 722
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 789494848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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