Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30078X
(420 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X04201-1|CAA27798.1| 285|Homo sapiens protein ( Human skeletal ... 36 0.042
BC062740-1|AAH62740.1| 158|Homo sapiens TPM3 protein protein. 36 0.042
BC008425-1|AAH08425.1| 285|Homo sapiens tropomyosin 3 protein. 36 0.042
BC008407-1|AAH08407.1| 285|Homo sapiens tropomyosin 3 protein. 36 0.042
AL590431-12|CAH71269.1| 284|Homo sapiens tropomyosin 3 protein. 36 0.042
AL590431-11|CAH71270.1| 242|Homo sapiens tropomyosin 3 protein. 36 0.042
AL590431-7|CAH71266.1| 248|Homo sapiens tropomyosin 3 protein. 36 0.042
AL590431-4|CAH71262.1| 158|Homo sapiens tropomyosin 3 protein. 36 0.042
AK092690-1|BAC03946.1| 243|Homo sapiens protein ( Homo sapiens ... 36 0.042
AF474157-1|AAL84570.1| 247|Homo sapiens TPMsk3 protein. 36 0.042
M19714-1|AAA61226.1| 264|Homo sapiens TPM1 protein. 35 0.097
M19713-1|AAA61225.1| 284|Homo sapiens TPM1 protein. 35 0.097
BC007433-1|AAH07433.1| 284|Homo sapiens tropomyosin 1 (alpha) p... 35 0.097
AY640415-1|AAT68295.1| 284|Homo sapiens tropomyosin alpha stria... 35 0.097
AY640414-1|AAT68294.1| 284|Homo sapiens sarcomeric tropomyosin ... 35 0.097
AK129882-1|BAC85248.1| 217|Homo sapiens protein ( Homo sapiens ... 35 0.097
AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens ... 34 0.17
AK057435-1|BAB71485.1| 170|Homo sapiens protein ( Homo sapiens ... 34 0.22
X06825-1|CAA29971.1| 284|Homo sapiens protein ( Human mRNA for ... 33 0.39
M12126-1|AAA61229.1| 131|Homo sapiens TPM2 protein. 33 0.39
AL133410-4|CAI10977.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 33 0.39
AK126884-1|BAC86735.1| 175|Homo sapiens protein ( Homo sapiens ... 32 0.68
AK124627-1|BAC85906.1| 175|Homo sapiens protein ( Homo sapiens ... 32 0.68
U77783-1|AAC15910.1| 1336|Homo sapiens N-methyl-D-aspartate rece... 32 0.90
AK097452-1|BAC05058.1| 225|Homo sapiens protein ( Homo sapiens ... 32 0.90
AB209292-1|BAD92529.1| 610|Homo sapiens N-methyl-D-aspartate re... 32 0.90
AM183303-1|CAJ66088.1| 418|Homo sapiens autogenous vein graft r... 31 1.2
AK128134-1|BAC87289.1| 377|Homo sapiens member 6 (SLC12A6). pr... 31 1.6
AF474156-1|AAL84569.1| 203|Homo sapiens TPMsk1 protein. 30 3.6
AK124803-1|BAC85953.1| 180|Homo sapiens protein ( Homo sapiens ... 29 4.8
AK123631-1|BAC85667.1| 207|Homo sapiens protein ( Homo sapiens ... 29 6.3
AK096940-1|BAC04906.1| 226|Homo sapiens protein ( Homo sapiens ... 29 8.4
>X04201-1|CAA27798.1| 285|Homo sapiens protein ( Human skeletal
muscle 1.3 kb mRNA for tropomyosin. ).
Length = 285
Score = 36.3 bits (80), Expect = 0.042
Identities = 17/60 (28%), Positives = 34/60 (56%)
Frame = -2
Query: 419 QRVXEFKDQLKTLTG*LXXXXXXXXXXXXXXXRLQKEVDRLEDEIGINKDRYKSLADEMD 240
Q+ ++++++K LT L +L+K +D LEDE+ K +YK++++E+D
Sbjct: 217 QKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELD 276
>BC062740-1|AAH62740.1| 158|Homo sapiens TPM3 protein protein.
Length = 158
Score = 36.3 bits (80), Expect = 0.042
Identities = 17/60 (28%), Positives = 34/60 (56%)
Frame = -2
Query: 419 QRVXEFKDQLKTLTG*LXXXXXXXXXXXXXXXRLQKEVDRLEDEIGINKDRYKSLADEMD 240
Q+ ++++++K LT L +L+K +D LEDE+ K +YK++++E+D
Sbjct: 90 QKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELD 149
>BC008425-1|AAH08425.1| 285|Homo sapiens tropomyosin 3 protein.
Length = 285
Score = 36.3 bits (80), Expect = 0.042
Identities = 17/60 (28%), Positives = 34/60 (56%)
Frame = -2
Query: 419 QRVXEFKDQLKTLTG*LXXXXXXXXXXXXXXXRLQKEVDRLEDEIGINKDRYKSLADEMD 240
Q+ ++++++K LT L +L+K +D LEDE+ K +YK++++E+D
Sbjct: 217 QKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELD 276
>BC008407-1|AAH08407.1| 285|Homo sapiens tropomyosin 3 protein.
Length = 285
Score = 36.3 bits (80), Expect = 0.042
Identities = 17/60 (28%), Positives = 34/60 (56%)
Frame = -2
Query: 419 QRVXEFKDQLKTLTG*LXXXXXXXXXXXXXXXRLQKEVDRLEDEIGINKDRYKSLADEMD 240
Q+ ++++++K LT L +L+K +D LEDE+ K +YK++++E+D
Sbjct: 217 QKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELD 276
>AL590431-12|CAH71269.1| 284|Homo sapiens tropomyosin 3 protein.
Length = 284
Score = 36.3 bits (80), Expect = 0.042
Identities = 17/60 (28%), Positives = 34/60 (56%)
Frame = -2
Query: 419 QRVXEFKDQLKTLTG*LXXXXXXXXXXXXXXXRLQKEVDRLEDEIGINKDRYKSLADEMD 240
Q+ ++++++K LT L +L+K +D LEDE+ K +YK++++E+D
Sbjct: 216 QKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELD 275
>AL590431-11|CAH71270.1| 242|Homo sapiens tropomyosin 3 protein.
Length = 242
Score = 36.3 bits (80), Expect = 0.042
Identities = 17/60 (28%), Positives = 34/60 (56%)
Frame = -2
Query: 419 QRVXEFKDQLKTLTG*LXXXXXXXXXXXXXXXRLQKEVDRLEDEIGINKDRYKSLADEMD 240
Q+ ++++++K LT L +L+K +D LEDE+ K +YK++++E+D
Sbjct: 174 QKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELD 233
>AL590431-7|CAH71266.1| 248|Homo sapiens tropomyosin 3 protein.
Length = 248
Score = 36.3 bits (80), Expect = 0.042
Identities = 17/60 (28%), Positives = 34/60 (56%)
Frame = -2
Query: 419 QRVXEFKDQLKTLTG*LXXXXXXXXXXXXXXXRLQKEVDRLEDEIGINKDRYKSLADEMD 240
Q+ ++++++K LT L +L+K +D LEDE+ K +YK++++E+D
Sbjct: 180 QKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELD 239
>AL590431-4|CAH71262.1| 158|Homo sapiens tropomyosin 3 protein.
Length = 158
Score = 36.3 bits (80), Expect = 0.042
Identities = 17/60 (28%), Positives = 34/60 (56%)
Frame = -2
Query: 419 QRVXEFKDQLKTLTG*LXXXXXXXXXXXXXXXRLQKEVDRLEDEIGINKDRYKSLADEMD 240
Q+ ++++++K LT L +L+K +D LEDE+ K +YK++++E+D
Sbjct: 90 QKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELD 149
>AK092690-1|BAC03946.1| 243|Homo sapiens protein ( Homo sapiens
cDNA FLJ35371 fis, clone SKMUS2001740, highly similar to
TROPOMYOSIN ALPHA CHAIN, SKELETAL MUSCLE TYPE. ).
Length = 243
Score = 36.3 bits (80), Expect = 0.042
Identities = 17/60 (28%), Positives = 34/60 (56%)
Frame = -2
Query: 419 QRVXEFKDQLKTLTG*LXXXXXXXXXXXXXXXRLQKEVDRLEDEIGINKDRYKSLADEMD 240
Q+ ++++++K LT L +L+K +D LEDE+ K +YK++++E+D
Sbjct: 175 QKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELD 234
>AF474157-1|AAL84570.1| 247|Homo sapiens TPMsk3 protein.
Length = 247
Score = 36.3 bits (80), Expect = 0.042
Identities = 17/60 (28%), Positives = 34/60 (56%)
Frame = -2
Query: 419 QRVXEFKDQLKTLTG*LXXXXXXXXXXXXXXXRLQKEVDRLEDEIGINKDRYKSLADEMD 240
Q+ ++++++K LT L +L+K +D LEDE+ K +YK++++E+D
Sbjct: 180 QKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELD 239
>M19714-1|AAA61226.1| 264|Homo sapiens TPM1 protein.
Length = 264
Score = 35.1 bits (77), Expect = 0.097
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = -2
Query: 419 QRVXEFKDQLKTLTG*LXXXXXXXXXXXXXXXRLQKEVDRLEDEIGINKDRYKSLADEMD 240
Q+ +++++K L+ L +L+K +D LEDE+ K +YK++++E+D
Sbjct: 196 QKEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELD 255
>M19713-1|AAA61225.1| 284|Homo sapiens TPM1 protein.
Length = 284
Score = 35.1 bits (77), Expect = 0.097
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = -2
Query: 419 QRVXEFKDQLKTLTG*LXXXXXXXXXXXXXXXRLQKEVDRLEDEIGINKDRYKSLADEMD 240
Q+ +++++K L+ L +L+K +D LEDE+ K +YK++++E+D
Sbjct: 216 QKEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELD 275
>BC007433-1|AAH07433.1| 284|Homo sapiens tropomyosin 1 (alpha)
protein.
Length = 284
Score = 35.1 bits (77), Expect = 0.097
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = -2
Query: 419 QRVXEFKDQLKTLTG*LXXXXXXXXXXXXXXXRLQKEVDRLEDEIGINKDRYKSLADEMD 240
Q+ +++++K L+ L +L+K +D LEDE+ K +YK++++E+D
Sbjct: 216 QKEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELD 275
>AY640415-1|AAT68295.1| 284|Homo sapiens tropomyosin alpha striated
muscle isoform protein.
Length = 284
Score = 35.1 bits (77), Expect = 0.097
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = -2
Query: 419 QRVXEFKDQLKTLTG*LXXXXXXXXXXXXXXXRLQKEVDRLEDEIGINKDRYKSLADEMD 240
Q+ +++++K L+ L +L+K +D LEDE+ K +YK++++E+D
Sbjct: 216 QKEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELD 275
>AY640414-1|AAT68294.1| 284|Homo sapiens sarcomeric tropomyosin
kappa protein.
Length = 284
Score = 35.1 bits (77), Expect = 0.097
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = -2
Query: 419 QRVXEFKDQLKTLTG*LXXXXXXXXXXXXXXXRLQKEVDRLEDEIGINKDRYKSLADEMD 240
Q+ +++++K L+ L +L+K +D LEDE+ K +YK++++E+D
Sbjct: 216 QKEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELD 275
>AK129882-1|BAC85248.1| 217|Homo sapiens protein ( Homo sapiens
cDNA FLJ26372 fis, clone HRT06233. ).
Length = 217
Score = 35.1 bits (77), Expect = 0.097
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = -2
Query: 419 QRVXEFKDQLKTLTG*LXXXXXXXXXXXXXXXRLQKEVDRLEDEIGINKDRYKSLADEMD 240
Q+ +++++K L+ L +L+K +D LEDE+ K +YK++++E+D
Sbjct: 149 QKEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELD 208
>AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ45698 fis, clone FEBRA2017811. ).
Length = 415
Score = 34.3 bits (75), Expect = 0.17
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = -3
Query: 205 SHSTYRPHTYTNRTCTHTYAAPLPHTHKHMYIN---YTTTRIHVYT 77
+H PHT+ + TCTH ++ +TH H +I+ +T T H YT
Sbjct: 267 THMDTYPHTHIH-TCTHMHSHAHINTHTHAHIHMHMHTHTHTHTYT 311
Score = 33.9 bits (74), Expect = 0.22
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -3
Query: 202 HSTYRPHTYTNR-TCTHTYAAPLPHTHKHMYI-NYTTTRIHVYT 77
HS H YT+ TCT T HTH H+++ +T T H++T
Sbjct: 164 HSDTHLHIYTHTLTCTQTQIHTCTHTHIHIHMPTHTRTYTHMHT 207
Score = 32.3 bits (70), Expect = 0.68
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -3
Query: 202 HSTYRPHTYTN-RTCTHTYAAPLPHTHKHMYIN-YTTTRIHVYT 77
H HT T+ TCT+T HTH H+Y + +T T IH+++
Sbjct: 124 HMNIHTHTCTHIYTCTYTVVCT--HTHMHIYTHMHTHTCIHIHS 165
Score = 31.9 bits (69), Expect = 0.90
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
Frame = -3
Query: 205 SHSTYRPHTYTN---RTCTHTYAAPLPHTHKHMYIN-----YTTTRIHVYT 77
SH+ HT+ + THT+ H H H++IN YT T I YT
Sbjct: 285 SHAHINTHTHAHIHMHMHTHTHTHTYTHAHAHIHINTYMHTYTYTHIRTYT 335
Score = 28.7 bits (61), Expect = 8.4
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 196 TYRPHTYTNRTCTHTYAAPLPHTHKHMYIN-YTTTRIHVYT*CNNIY 59
TY+ TH + HTH H++I+ + IH +T C +IY
Sbjct: 91 TYKRTYIQGHIHTHMHTYTHAHTHAHIHIHVHIHMNIHTHT-CTHIY 136
>AK057435-1|BAB71485.1| 170|Homo sapiens protein ( Homo sapiens
cDNA FLJ32873 fis, clone TESTI2003998, weakly similar to
T-CELL RECEPTOR BETA CHAIN ANA 11. ).
Length = 170
Score = 33.9 bits (74), Expect = 0.22
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = -3
Query: 202 HSTYRPHTYT-NRTCTHTYAAPLPHTHKH---MYINYTTTRIHVYT*CN 68
HS HT T TCTHT+ + H H H YTT H +T N
Sbjct: 86 HSHTHAHTQTWTYTCTHTHTHAVTHVHMHAGTQTRTYTTLHKHAHTDTN 134
>X06825-1|CAA29971.1| 284|Homo sapiens protein ( Human mRNA for
skeletal beta-tropomyosin. ).
Length = 284
Score = 33.1 bits (72), Expect = 0.39
Identities = 12/28 (42%), Positives = 22/28 (78%)
Frame = -2
Query: 320 LQKEVDRLEDEIGINKDRYKSLADEMDS 237
L+K +D LEDE+ K +YK++++E+D+
Sbjct: 249 LEKTIDDLEDEVYAQKMKYKAISEELDN 276
>M12126-1|AAA61229.1| 131|Homo sapiens TPM2 protein.
Length = 131
Score = 33.1 bits (72), Expect = 0.39
Identities = 12/28 (42%), Positives = 22/28 (78%)
Frame = -2
Query: 320 LQKEVDRLEDEIGINKDRYKSLADEMDS 237
L+K +D LEDE+ K +YK++++E+D+
Sbjct: 96 LEKTIDDLEDEVYAQKMKYKAISEELDN 123
>AL133410-4|CAI10977.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 33.1 bits (72), Expect = 0.39
Identities = 12/28 (42%), Positives = 22/28 (78%)
Frame = -2
Query: 320 LQKEVDRLEDEIGINKDRYKSLADEMDS 237
L+K +D LEDE+ K +YK++++E+D+
Sbjct: 249 LEKTIDDLEDEVYAQKMKYKAISEELDN 276
>AK126884-1|BAC86735.1| 175|Homo sapiens protein ( Homo sapiens
cDNA FLJ44936 fis, clone BRAMY3018121. ).
Length = 175
Score = 32.3 bits (70), Expect = 0.68
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 166 TCTHTYAAPLPHTHKHMYIN-YTTTRIHVYT 77
T HTY HTHKH++ + + T H+YT
Sbjct: 109 THMHTYTCTCTHTHKHIHAHIHIHTHTHIYT 139
Score = 31.9 bits (69), Expect = 0.90
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -3
Query: 202 HSTYRPHTYTN-RTCTHTYAAPLPHTHKHMYINYTTTRIHVYT 77
H+ HT+ + RTC HT H H H + YT +H +T
Sbjct: 6 HTCTHTHTHAHIRTCIHTCTDTHTHMHTHT-LTYTHIHMHTHT 47
Score = 30.3 bits (65), Expect = 2.7
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -3
Query: 184 HTYTNRTCTHTYAAPLPHTHKHMYINYTTTRIHVYT 77
HT T+ T TH + L +TH HM +T T+ H+YT
Sbjct: 22 HTCTD-THTHMHTHTLTYTHIHM---HTHTQTHIYT 53
>AK124627-1|BAC85906.1| 175|Homo sapiens protein ( Homo sapiens
cDNA FLJ42636 fis, clone BRACE3023912. ).
Length = 175
Score = 32.3 bits (70), Expect = 0.68
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -3
Query: 196 TYRPHTYTNRTCTHTYAAPLPHTHKHMYINYTTTRIHVYT 77
TY TY + T THT+ L H H Y TR+H +T
Sbjct: 135 TYAQCTYLH-TRTHTHTQALMHRCTHTQCTYLHTRVHAHT 173
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3
Query: 169 RTCTHTYAAPLPHTHKHMYINYTTTRIHVYT 77
RTCTHT+A L H H Y TR++ T
Sbjct: 32 RTCTHTHAQALMHRCTHTQGMYLHTRVNTRT 62
>U77783-1|AAC15910.1| 1336|Homo sapiens N-methyl-D-aspartate receptor
2D subunit precursor protein.
Length = 1336
Score = 31.9 bits (69), Expect = 0.90
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 5/47 (10%)
Frame = -3
Query: 244 WIPPSPSWLVSKLSHSTYR-----PHTYTNRTCTHTYAAPLPHTHKH 119
W PP P W L R H + R T AA PH H+H
Sbjct: 1207 WAPPPPPWAAGPLPRRRARCGCPRSHPHRPRASHRTPAAAAPHHHRH 1253
>AK097452-1|BAC05058.1| 225|Homo sapiens protein ( Homo sapiens
cDNA FLJ40133 fis, clone TESTI2012231. ).
Length = 225
Score = 31.9 bits (69), Expect = 0.90
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 205 SHSTYRPHTYTNRTCTHTYAAPLPHTHKHMYINYTTTRIHV 83
+H+T+ H + + THT PL TH H + + T R H+
Sbjct: 47 THTTHTTHINSYKAFTHTTHTPLTSTHLHTPLTH-TPRTHI 86
>AB209292-1|BAD92529.1| 610|Homo sapiens N-methyl-D-aspartate
receptor subunit 2D precursor variant protein.
Length = 610
Score = 31.9 bits (69), Expect = 0.90
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 5/47 (10%)
Frame = -3
Query: 244 WIPPSPSWLVSKLSHSTYR-----PHTYTNRTCTHTYAAPLPHTHKH 119
W PP P W L R H + R T AA PH H+H
Sbjct: 481 WAPPPPPWAAGPLPRRRARCGCPRSHPHRPRASHRTPAAAAPHHHRH 527
>AM183303-1|CAJ66088.1| 418|Homo sapiens autogenous vein graft
remodeling associated protein 2 protein.
Length = 418
Score = 31.5 bits (68), Expect = 1.2
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 79 CKHVSESLCN*CTXXXXXXXXXLRMCVYMFCLCMCVVCMWSARA 210
C +VSES+C L +C + C+C+CV ARA
Sbjct: 326 CMYVSESVCVKSVECVCTESLCLCVCACVVCVCVCVCVCVHARA 369
>AK128134-1|BAC87289.1| 377|Homo sapiens member 6 (SLC12A6).
protein.
Length = 377
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -3
Query: 205 SHSTYRPHTYTNRTCTHTYAAPLPHTHKHMYINYT-TTRIH 86
+HS PHT TH++A PH H YT TT H
Sbjct: 96 THSLTCPHTLAPTRHTHSHACTHPHVQTHTASAYTFTTHSH 136
Score = 31.1 bits (67), Expect = 1.6
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 10/86 (11%)
Frame = -3
Query: 304 TGSKTRSASTRIDTRAWLMRWIPPSPSWLVSKLSHSTYRPHTYTN----------RTCTH 155
T T S S I T + P +P+ + TY PHT ++ T H
Sbjct: 137 TPGHTHSCSHLIHTHSHAHSHPPNAPTHTHAHTLRPTYCPHTRSHPMHLLTLIRPLTPAH 196
Query: 154 TYAAPLPHTHKHMYINYTTTRIHVYT 77
T+ P HTH H + TR H +T
Sbjct: 197 THLTPGSHTHVHTPAHTPHTRSHNHT 222
>AF474156-1|AAL84569.1| 203|Homo sapiens TPMsk1 protein.
Length = 203
Score = 29.9 bits (64), Expect = 3.6
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = -2
Query: 419 QRVXEFKDQLKTLTG*LXXXXXXXXXXXXXXXRLQKEVDRLEDEIGINKDRYKSLAD 249
Q+ +++++K L+ L +L+K +D LEDE+ K +YK++++
Sbjct: 147 QKEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISE 203
>AK124803-1|BAC85953.1| 180|Homo sapiens protein ( Homo sapiens
cDNA FLJ42813 fis, clone BRCAN2012355. ).
Length = 180
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 160 THTYAAPLPH--THKHMYINYTTTRIHVYT 77
TH Y H THKHMY+ YT ++ YT
Sbjct: 37 THRYMCTRKHMYTHKHMYV-YTYIYVYTYT 65
>AK123631-1|BAC85667.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ41637 fis, clone FEBRA1000030, weakly similar
to T-CELL RECEPTOR BETA CHAIN ANA 11. ).
Length = 207
Score = 29.1 bits (62), Expect = 6.3
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -3
Query: 193 YRP-HTYTNRTCTHTYAAPLPHTHKHMYINYTTTRIHVYT 77
Y P HT+T+ T TH + P+TH H T H +T
Sbjct: 26 YLPTHTHTH-THTHAHCPVPPYTHAHAVCTSLHTHTHTHT 64
>AK096940-1|BAC04906.1| 226|Homo sapiens protein ( Homo sapiens
cDNA FLJ39621 fis, clone SMINT2001158. ).
Length = 226
Score = 28.7 bits (61), Expect = 8.4
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -3
Query: 202 HSTYRPHTYTNRTCTHTYAAPLPHTHKHMYIN---YTTTRIHVY 80
HS HT+ T TH + + HTH H + + YT T H +
Sbjct: 106 HSNTPTHTHP-LTSTHIQTSTVTHTHSHTHAHKHTYTHTSTHTH 148
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,565,851
Number of Sequences: 237096
Number of extensions: 747241
Number of successful extensions: 2614
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 2461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2589
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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