Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30074X
         (372 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98877-16|CAH60800.1|  975|Caenorhabditis elegans Hypothetical p...    28   2.4  
Z98877-15|CAB63407.3|  572|Caenorhabditis elegans Hypothetical p...    28   2.4  
U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical pr...    28   2.4  
AY551963-1|AAS65427.1|  458|Caenorhabditis elegans histone acety...    27   4.3  
AF106581-4|AAC78211.1|  458|Caenorhabditis elegans Myst family h...    27   4.3  
AC024765-5|AAF60527.3|  975|Caenorhabditis elegans Hypothetical ...    27   4.3  
Z73976-2|CAA98285.1|  360|Caenorhabditis elegans Hypothetical pr...    27   5.7  
U39472-10|AAZ82853.1|  354|Caenorhabditis elegans Serpentine rec...    27   5.7  
Z81076-12|CAB03061.2|  161|Caenorhabditis elegans Hypothetical p...    26   9.9  

>Z98877-16|CAH60800.1|  975|Caenorhabditis elegans Hypothetical
           protein Y69H2.10b protein.
          Length = 975

 Score = 27.9 bits (59), Expect = 2.4
 Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 144 ESASECV-GCTCAREHRRDTPPTSAPHTRTC 55
           ++ ++C+ GCTC   ++RD+      H+R C
Sbjct: 484 KAPAKCLPGCTCRPAYKRDSDSGQCVHSRQC 514


>Z98877-15|CAB63407.3|  572|Caenorhabditis elegans Hypothetical
           protein Y69H2.10a protein.
          Length = 572

 Score = 27.9 bits (59), Expect = 2.4
 Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 144 ESASECV-GCTCAREHRRDTPPTSAPHTRTC 55
           ++ ++C+ GCTC   ++RD+      H+R C
Sbjct: 484 KAPAKCLPGCTCRPAYKRDSDSGQCVHSRQC 514


>U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical
           protein C52E12.4 protein.
          Length = 1487

 Score = 27.9 bits (59), Expect = 2.4
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +2

Query: 2   FYDN--DIALLDVKWRVRGVHVRVCGAEVGGVSRRCSRAHVHPTHSLALSIHT-PR 160
           FY+   D+A+ D   +++  HVR   A   G+  +  R H HP  +++   HT PR
Sbjct: 122 FYEEVKDLAICDAMAQLQQDHVREITARHNGIIEKQQRIH-HPPGTVSGGTHTLPR 176


>AY551963-1|AAS65427.1|  458|Caenorhabditis elegans histone
           acetyltransferase protein.
          Length = 458

 Score = 27.1 bits (57), Expect = 4.3
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = +1

Query: 175 NKYQQRYKIPFRKNIRSLKCIY---FCLAYKKKE 267
           ++ Q  Y  P+ + + SL CIY   FCL Y K +
Sbjct: 181 SRIQPWYFAPYPQQLTSLDCIYICEFCLKYLKSK 214


>AF106581-4|AAC78211.1|  458|Caenorhabditis elegans Myst family
           histone acetyltransferase-like protein 1 protein.
          Length = 458

 Score = 27.1 bits (57), Expect = 4.3
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = +1

Query: 175 NKYQQRYKIPFRKNIRSLKCIY---FCLAYKKKE 267
           ++ Q  Y  P+ + + SL CIY   FCL Y K +
Sbjct: 181 SRIQPWYFAPYPQQLTSLDCIYICEFCLKYLKSK 214


>AC024765-5|AAF60527.3|  975|Caenorhabditis elegans Hypothetical
           protein Y39A3CR.3 protein.
          Length = 975

 Score = 27.1 bits (57), Expect = 4.3
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 181 YQQRYKIPFRKNIRSLKCIYFCLAYKK 261
           +   Y +    NI   KC+Y CL ++K
Sbjct: 87  HSDNYTVKIEANILLAKCLYACLEFRK 113


>Z73976-2|CAA98285.1|  360|Caenorhabditis elegans Hypothetical
           protein T07C12.6 protein.
          Length = 360

 Score = 26.6 bits (56), Expect = 5.7
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 267 IAYLVFYRFSLIINS*CIKSY 329
           I  L+FY F+  INS C+K Y
Sbjct: 34  ITELIFYFFAFYINSVCLKVY 54


>U39472-10|AAZ82853.1|  354|Caenorhabditis elegans Serpentine
           receptor, class a (alpha)protein 36 protein.
          Length = 354

 Score = 26.6 bits (56), Expect = 5.7
 Identities = 17/73 (23%), Positives = 34/73 (46%)
 Frame = -3

Query: 349 SDFSLKK*LFIH*LLMMSENL*NTKYAILFFCKPNKNIYTLGI*CFYERVFCNVVDIYLY 170
           + +S +  +F+H L+++   +   K   +   K   +  T  +  FY   +    DIY  
Sbjct: 26  TSYSSRLNIFLHNLVIILTMVFTRKAVKIMLSKSMFSTTTRNL-LFYCMNYYIFHDIYFA 84

Query: 169 YLLPWSMYRECER 131
           + + WS+YR  E+
Sbjct: 85  FTMNWSLYRSIEK 97


>Z81076-12|CAB03061.2|  161|Caenorhabditis elegans Hypothetical
           protein F35C5.11 protein.
          Length = 161

 Score = 25.8 bits (54), Expect = 9.9
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = -1

Query: 225 GSNVFTKGYFVTLLIFIYIIYYRGVCIESASECVGCTCAREHRRDTP 85
           GS++ + G F      +Y I Y GV ++  +   GC   RE     P
Sbjct: 59  GSDMCSNGTFCLKRAKVYQIGYSGVNLKWTTYTKGCATLREDNDQIP 105


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,860,014
Number of Sequences: 27780
Number of extensions: 153309
Number of successful extensions: 485
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)