Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30072
(587 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003533-1|AAH03533.1| 420|Homo sapiens kringle containing tran... 31 3.0
AK223422-1|BAD97142.1| 420|Homo sapiens kringle-containing tran... 31 3.0
AK075033-1|BAC11365.1| 381|Homo sapiens protein ( Homo sapiens ... 31 3.0
AK027669-1|BAB55281.1| 420|Homo sapiens protein ( Homo sapiens ... 31 3.0
AB086356-1|BAC00824.1| 420|Homo sapiens kringle-containing prot... 31 3.0
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 30 7.0
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 30 7.0
X07884-1|CAA30731.1| 472|Homo sapiens protein ( Human mRNA for ... 30 7.0
M36546-1|AAA60150.1| 472|Homo sapiens COL1A1 protein. 30 7.0
M20789-1|AAB59373.1| 589|Homo sapiens alpha-1 type I collagen p... 30 7.0
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 30 7.0
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 30 7.0
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 30 7.0
>BC003533-1|AAH03533.1| 420|Homo sapiens kringle containing
transmembrane protein 2 protein.
Length = 420
Score = 31.1 bits (67), Expect = 3.0
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = -3
Query: 579 REGRPRRAGHQQVPRQGTRGICSERSQPGAPALAPRPC*RLRHLP 445
RE PRR G P G G+C S G P AP RLR LP
Sbjct: 373 REKGPRRWGLPGAP--GEAGLCGTNSPEGWPCPAPPGTPRLRVLP 415
>AK223422-1|BAD97142.1| 420|Homo sapiens kringle-containing
transmembrane protein 2 isoform b precursor variant
protein.
Length = 420
Score = 31.1 bits (67), Expect = 3.0
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = -3
Query: 579 REGRPRRAGHQQVPRQGTRGICSERSQPGAPALAPRPC*RLRHLP 445
RE PRR G P G G+C S G P AP RLR LP
Sbjct: 373 REKGPRRWGLPGAP--GEAGLCGTNSPEGWPCPAPPGTPRLRVLP 415
>AK075033-1|BAC11365.1| 381|Homo sapiens protein ( Homo sapiens
cDNA FLJ90552 fis, clone OVARC1000811, highly similar to
Kringle-containing transmembrane protein 2 isoform b
precursor. ).
Length = 381
Score = 31.1 bits (67), Expect = 3.0
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = -3
Query: 579 REGRPRRAGHQQVPRQGTRGICSERSQPGAPALAPRPC*RLRHLP 445
RE PRR G P G G+C S G P AP RLR LP
Sbjct: 334 REKGPRRWGLPGAP--GEAGLCGTNSPEGWPCPAPPGTPRLRVLP 376
>AK027669-1|BAB55281.1| 420|Homo sapiens protein ( Homo sapiens
cDNA FLJ14763 fis, clone NT2RP3003621. ).
Length = 420
Score = 31.1 bits (67), Expect = 3.0
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = -3
Query: 579 REGRPRRAGHQQVPRQGTRGICSERSQPGAPALAPRPC*RLRHLP 445
RE PRR G P G G+C S G P AP RLR LP
Sbjct: 373 REKGPRRWGLPGAP--GEAGLCGTNSPEGWPCPAPPGTPRLRVLP 415
>AB086356-1|BAC00824.1| 420|Homo sapiens kringle-containing protein
protein.
Length = 420
Score = 31.1 bits (67), Expect = 3.0
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = -3
Query: 579 REGRPRRAGHQQVPRQGTRGICSERSQPGAPALAPRPC*RLRHLP 445
RE PRR G P G G+C S G P AP RLR LP
Sbjct: 373 REKGPRRWGLPGAP--GEAGLCGTNSPEGWPCPAPPGTPRLRVLP 415
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 29.9 bits (64), Expect = 7.0
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 576 EGRPRRAGHQQVPRQ-GTRGICSERSQPGAPALA 478
+G P G P Q G RG+ ER +PGAP A
Sbjct: 286 KGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPA 319
>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
protein.
Length = 1069
Score = 29.9 bits (64), Expect = 7.0
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 576 EGRPRRAGHQQVPRQ-GTRGICSERSQPGAPALA 478
+G P G P Q G RG+ ER +PGAP A
Sbjct: 286 KGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPA 319
>X07884-1|CAA30731.1| 472|Homo sapiens protein ( Human mRNA for
alpha-1(I) chain of procollagen type I. ).
Length = 472
Score = 29.9 bits (64), Expect = 7.0
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 576 EGRPRRAGHQQVPRQ-GTRGICSERSQPGAPALA 478
+G P G P Q G RG+ ER +PGAP A
Sbjct: 286 KGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPA 319
>M36546-1|AAA60150.1| 472|Homo sapiens COL1A1 protein.
Length = 472
Score = 29.9 bits (64), Expect = 7.0
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 576 EGRPRRAGHQQVPRQ-GTRGICSERSQPGAPALA 478
+G P G P Q G RG+ ER +PGAP A
Sbjct: 286 KGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPA 319
>M20789-1|AAB59373.1| 589|Homo sapiens alpha-1 type I collagen
protein.
Length = 589
Score = 29.9 bits (64), Expect = 7.0
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 576 EGRPRRAGHQQVPRQ-GTRGICSERSQPGAPALA 478
+G P G P Q G RG+ ER +PGAP A
Sbjct: 286 KGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPA 319
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 29.9 bits (64), Expect = 7.0
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 576 EGRPRRAGHQQVPRQ-GTRGICSERSQPGAPALA 478
+G P G P Q G RG+ ER +PGAP A
Sbjct: 286 KGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPA 319
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 29.9 bits (64), Expect = 7.0
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 576 EGRPRRAGHQQVPRQ-GTRGICSERSQPGAPALA 478
+G P G P Q G RG+ ER +PGAP A
Sbjct: 283 KGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPA 316
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 29.9 bits (64), Expect = 7.0
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 576 EGRPRRAGHQQVPRQ-GTRGICSERSQPGAPALA 478
+G P G P Q G RG+ ER +PGAP A
Sbjct: 289 KGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPA 322
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,164,101
Number of Sequences: 237096
Number of extensions: 1599610
Number of successful extensions: 4678
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4669
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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