Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30072
(587 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 32 0.35
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 32 0.35
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 32 0.35
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 32 0.35
Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical pr... 32 0.35
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 29 1.9
Z99171-2|CAB16314.1| 710|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 28 5.7
Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical p... 28 5.7
Z73976-2|CAA98285.1| 360|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 27 9.9
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 27 9.9
U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical pr... 27 9.9
U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical pr... 27 9.9
AF067214-3|AAC17002.1| 211|Caenorhabditis elegans Hypothetical ... 27 9.9
AC024765-5|AAF60527.3| 975|Caenorhabditis elegans Hypothetical ... 27 9.9
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 31.9 bits (69), Expect = 0.35
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = -2
Query: 502 SARGPSARAPPLLTASAPSHLGSTWRPKISKRSTTKHKNGLY 377
S RGP+AR P L AS+P H+ + W S RS G+Y
Sbjct: 751 SPRGPTARIP-LSLASSPVHVNNNW-GSYSARSRGGSSTGIY 790
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 31.9 bits (69), Expect = 0.35
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = -2
Query: 502 SARGPSARAPPLLTASAPSHLGSTWRPKISKRSTTKHKNGLY 377
S RGP+AR P L AS+P H+ + W S RS G+Y
Sbjct: 885 SPRGPTARIP-LSLASSPVHVNNNW-GSYSARSRGGSSTGIY 924
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 31.9 bits (69), Expect = 0.35
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = -2
Query: 502 SARGPSARAPPLLTASAPSHLGSTWRPKISKRSTTKHKNGLY 377
S RGP+AR P L AS+P H+ + W S RS G+Y
Sbjct: 751 SPRGPTARIP-LSLASSPVHVNNNW-GSYSARSRGGSSTGIY 790
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical protein
F45E10.1c protein.
Length = 1654
Score = 31.9 bits (69), Expect = 0.35
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = -2
Query: 502 SARGPSARAPPLLTASAPSHLGSTWRPKISKRSTTKHKNGLY 377
S RGP+AR P L AS+P H+ + W S RS G+Y
Sbjct: 885 SPRGPTARIP-LSLASSPVHVNNNW-GSYSARSRGGSSTGIY 924
>Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical
protein F45E10.1e protein.
Length = 1234
Score = 31.9 bits (69), Expect = 0.35
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = -2
Query: 502 SARGPSARAPPLLTASAPSHLGSTWRPKISKRSTTKHKNGLY 377
S RGP+AR P L AS+P H+ + W S RS G+Y
Sbjct: 465 SPRGPTARIP-LSLASSPVHVNNNW-GSYSARSRGGSSTGIY 504
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 573 GRPRRAGHQQVPRQGTRGICSERSQPGAPALAPRP 469
G+P +AGH Q + G +G PG P A +P
Sbjct: 256 GQPGQAGHAQPGQPGPQGDAGAPGAPGQPGSAGQP 290
>Z99171-2|CAB16314.1| 710|Caenorhabditis elegans Hypothetical
protein F47G4.2 protein.
Length = 710
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 314 KILNMQFFFFCKPNKNIYTLGI 249
K+LN FF FCK N+Y+L I
Sbjct: 148 KLLNPDFFQFCKSFPNLYSLDI 169
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 172 ESASECV-GCTCAREHRRDTPPTSAPHTRTC 83
++ ++C+ GCTC ++RD+ H+R C
Sbjct: 484 KAPAKCLPGCTCRPAYKRDSDSGQCVHSRQC 514
>Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical
protein Y69H2.10a protein.
Length = 572
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 172 ESASECV-GCTCAREHRRDTPPTSAPHTRTC 83
++ ++C+ GCTC ++RD+ H+R C
Sbjct: 484 KAPAKCLPGCTCRPAYKRDSDSGQCVHSRQC 514
>Z73976-2|CAA98285.1| 360|Caenorhabditis elegans Hypothetical
protein T07C12.6 protein.
Length = 360
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 296 IAYLVFYSFSLIINS*CIKSYV 361
I L+FY F+ INS C+K Y+
Sbjct: 34 ITELIFYFFAFYINSVCLKVYL 55
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1
Query: 587 EAEERADLAEQAISK 543
+AEERAD+AE A+SK
Sbjct: 1918 QAEERADIAENALSK 1932
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1
Query: 587 EAEERADLAEQAISK 543
+AEERAD+AE A+SK
Sbjct: 1918 QAEERADIAENALSK 1932
>U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical
protein C52E12.4 protein.
Length = 1487
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 42 DIALLDVKWRVRGVHVRVCGAEVGGVSRRCSRAHVHPTHSLALSIHT-PR 188
D+A+ D +++ HVR A G+ + R H HP +++ HT PR
Sbjct: 128 DLAICDAMAQLQQDHVREITARHNGIIEKQQRIH-HPPGTVSGGTHTLPR 176
>U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical
protein R02F2.8 protein.
Length = 494
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 398 CSGTFRNLRAPGRT*VGRC 454
C GTFRNL G+ +G C
Sbjct: 471 CCGTFRNLTVSGQNPIGYC 489
>AF067214-3|AAC17002.1| 211|Caenorhabditis elegans Hypothetical
protein F56C3.5 protein.
Length = 211
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 445 HLGSTWRPKISKRSTTKHKNGLYRFFVENVTFY 347
H P+I KR + K+ NG++ F+ + FY
Sbjct: 170 HCSENMGPEI-KRMSIKYNNGIFYLFINLIDFY 201
>AC024765-5|AAF60527.3| 975|Caenorhabditis elegans Hypothetical
protein Y39A3CR.3 protein.
Length = 975
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 209 YQQRYKIAFRKNIRSLKCIYFCLAYKK 289
+ Y + NI KC+Y CL ++K
Sbjct: 87 HSDNYTVKIEANILLAKCLYACLEFRK 113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,034,050
Number of Sequences: 27780
Number of extensions: 251361
Number of successful extensions: 871
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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