BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV30071 (685 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 287 8e-78 SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 287 8e-78 SB_56| Best HMM Match : Actin (HMM E-Value=0) 287 8e-78 SB_56628| Best HMM Match : Actin (HMM E-Value=0) 286 1e-77 SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 285 2e-77 SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 285 3e-77 SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 253 9e-68 SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 3e-21 SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 85 4e-17 SB_54| Best HMM Match : Actin (HMM E-Value=0) 85 7e-17 SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 69 4e-12 SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07 SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.006 SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 34 0.093 SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50 SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 2.0 SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) 29 2.7 SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 29 4.6 SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1 SB_8479| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1 >SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 338 Score = 287 bits (703), Expect = 8e-78 Identities = 132/138 (95%), Positives = 136/138 (98%) Frame = -1 Query: 685 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 506 KSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANT Sbjct: 201 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 260 Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326 VLSGGTTMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI Sbjct: 261 VLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 320 Query: 325 SKQEYDESGPSIVHRKCF 272 SKQEYDESGP+IVHRKCF Sbjct: 321 SKQEYDESGPAIVHRKCF 338 >SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 376 Score = 287 bits (703), Expect = 8e-78 Identities = 132/138 (95%), Positives = 136/138 (98%) Frame = -1 Query: 685 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 506 KSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANT Sbjct: 239 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 298 Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326 VLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI Sbjct: 299 VLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358 Query: 325 SKQEYDESGPSIVHRKCF 272 SKQEYDESGPSIVHRKCF Sbjct: 359 SKQEYDESGPSIVHRKCF 376 >SB_56| Best HMM Match : Actin (HMM E-Value=0) Length = 375 Score = 287 bits (703), Expect = 8e-78 Identities = 132/138 (95%), Positives = 136/138 (98%) Frame = -1 Query: 685 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 506 KSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANT Sbjct: 238 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 297 Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326 VLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI Sbjct: 298 VLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 357 Query: 325 SKQEYDESGPSIVHRKCF 272 SKQEYDESGPSIVHRKCF Sbjct: 358 SKQEYDESGPSIVHRKCF 375 >SB_56628| Best HMM Match : Actin (HMM E-Value=0) Length = 376 Score = 286 bits (702), Expect = 1e-77 Identities = 132/138 (95%), Positives = 136/138 (98%) Frame = -1 Query: 685 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 506 KSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANT Sbjct: 239 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 298 Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326 VLSGG+TMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI Sbjct: 299 VLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358 Query: 325 SKQEYDESGPSIVHRKCF 272 SKQEYDESGPSIVHRKCF Sbjct: 359 SKQEYDESGPSIVHRKCF 376 >SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 349 Score = 285 bits (699), Expect = 2e-77 Identities = 131/138 (94%), Positives = 136/138 (98%) Frame = -1 Query: 685 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 506 KSYELPDGQVITIGNERFRCPEAL QPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANT Sbjct: 212 KSYELPDGQVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANT 271 Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326 V+SGGTTMYPG+ADRMQKEI+ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI Sbjct: 272 VMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 331 Query: 325 SKQEYDESGPSIVHRKCF 272 SKQEYDESGP+IVHRKCF Sbjct: 332 SKQEYDESGPAIVHRKCF 349 >SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 375 Score = 285 bits (698), Expect = 3e-77 Identities = 131/138 (94%), Positives = 136/138 (98%) Frame = -1 Query: 685 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 506 KSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANT Sbjct: 238 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 297 Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326 VLSGG+TM+PGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI Sbjct: 298 VLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 357 Query: 325 SKQEYDESGPSIVHRKCF 272 SKQEYDESGPSIVHRKCF Sbjct: 358 SKQEYDESGPSIVHRKCF 375 >SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) Length = 149 Score = 253 bits (620), Expect = 9e-68 Identities = 114/138 (82%), Positives = 127/138 (92%) Frame = -1 Query: 685 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 506 K+YELPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE YN IMKCDVDIRKDLY+N Sbjct: 12 KTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIRKDLYSNC 71 Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326 VLSGG+TM+PGIADRMQKEI LA ++MK+K+IAPPERKYSVWIGGSILASLSTFQQMWI Sbjct: 72 VLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLSTFQQMWI 131 Query: 325 SKQEYDESGPSIVHRKCF 272 +K+EY E GP IVHRKCF Sbjct: 132 AKEEYHEYGPPIVHRKCF 149 >SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 411 Score = 99.1 bits (236), Expect = 3e-21 Identities = 58/158 (36%), Positives = 86/158 (54%), Gaps = 29/158 (18%) Frame = -1 Query: 685 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 506 + Y LPDG+V+ + ERF PEALFQP + +E G+ E +N+I D+D R + Y + Sbjct: 242 EQYTLPDGRVVKLSGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHI 301 Query: 505 VLSGGTTMYPGIADRMQKEITAL---------------------APST-----MKIKI-I 407 VLSGG+TMYPG+ R+++EI L P T K KI I Sbjct: 302 VLSGGSTMYPGLPSRLEREIKQLYLERVLKGDTSKLSSGMGMEQIPLTADYLLQKFKIRI 361 Query: 406 APP-ERKYSVWIGGSILAS-LSTFQQMWISKQEYDESG 299 P RK+ V++GG++LA + W++++EY+E G Sbjct: 362 EDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399 >SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) Length = 543 Score = 85.4 bits (202), Expect = 4e-17 Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 17/149 (11%) Frame = -1 Query: 655 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 479 + + ERF PE F P F + + E N I C +D+R+ LY N VLSGG+TM+ Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255 Query: 478 PGIADRMQKEIT----------------ALAPSTMKIKIIAPPERKYSVWIGGSILASLS 347 R+Q++I + P ++ ++I+ ++Y+VW GGS+LAS Sbjct: 256 RDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAVWFGGSMLASTP 315 Query: 346 TFQQMWISKQEYDESGPSIVHRKCF*THR 260 F + +K +YDE GPSI F HR Sbjct: 316 EFYSVCHTKADYDEHGPSICRHNPF-LHR 343 >SB_54| Best HMM Match : Actin (HMM E-Value=0) Length = 2486 Score = 84.6 bits (200), Expect = 7e-17 Identities = 38/62 (61%), Positives = 46/62 (74%) Frame = -1 Query: 679 YELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 500 Y LPDGQ I IG+ERFR E LFQPS LG + GIHE+ + SI KCD+D+R +L+ N VL Sbjct: 2285 YMLPDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIHESIFKSIKKCDIDLRAELFHNIVL 2344 Query: 499 SG 494 SG Sbjct: 2345 SG 2346 >SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) Length = 240 Score = 68.9 bits (161), Expect = 4e-12 Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 3/85 (3%) Frame = -1 Query: 595 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 416 G A G+ + S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P +M++ Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205 Query: 415 KII---APPERKYSVWIGGSILASL 350 K+I + E++++ WIGGSILASL Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230 >SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 245 Score = 52.4 bits (120), Expect = 3e-07 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%) Frame = -1 Query: 559 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIA 404 +S++ C +D RK L N VL GGT M PG R+ +EI L S +K+ Sbjct: 64 DSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQ 123 Query: 403 PP-ERKYSVWIGGSILASLSTFQQMWISKQEYDE 305 PP + W+GG+I SL +++ Y + Sbjct: 124 PPVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157 >SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) Length = 367 Score = 38.3 bits (85), Expect = 0.006 Identities = 15/28 (53%), Positives = 23/28 (82%) Frame = -1 Query: 556 SIMKCDVDIRKDLYANTVLSGGTTMYPG 473 +I K D+D+R+ LY+N VLSGG+T++ G Sbjct: 264 AIQKSDLDLRRVLYSNIVLSGGSTLFKG 291 >SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) Length = 921 Score = 34.3 bits (75), Expect = 0.093 Identities = 16/30 (53%), Positives = 19/30 (63%) Frame = -1 Query: 685 KSYELPDGQVITIGNERFRCPEALFQPSFL 596 K Y LPDGQ+I+IG E E LF+P L Sbjct: 869 KFYTLPDGQMISIGYECISSMEPLFRPDLL 898 >SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 40 Score = 31.9 bits (69), Expect = 0.50 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = -1 Query: 625 PEALFQPSFLGMEACGIHET 566 PE +FQPS LG+E GI ET Sbjct: 3 PEIIFQPSMLGLEQAGITET 22 >SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) Length = 1973 Score = 29.9 bits (64), Expect = 2.0 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%) Frame = +3 Query: 363 IDPPIHTEYFLSGGAMILIFIVDGARAVISFCIRSAIPGYMV-VPPD-NTVLAYKSLRMS 536 +DPP+ +Y L+GG ++ + FCI G++V PP+ N+ + R++ Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCI---FQGFVVPTPPECNSAIVLPDARIT 814 Query: 537 TS 542 S Sbjct: 815 AS 816 >SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) Length = 1066 Score = 29.5 bits (63), Expect = 2.7 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%) Frame = -2 Query: 345 PSNRCGSRNRSTTSLAPPLYTGSASK--RTARRCLQQPAAGC 226 P N+ G++ R +L P++TGS + RT + P+A C Sbjct: 879 PGNQAGNKTRPLRALRSPIHTGSTLEVDRTRQGTRPDPSARC 920 >SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) Length = 158 Score = 28.7 bits (61), Expect = 4.6 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = -2 Query: 657 SSLSETKDSVAQRLSSNPRSWVWK 586 S+ SETK SV +R + + W+W+ Sbjct: 96 STKSETKASVVERFNRTSKEWMWR 119 >SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 205 Score = 28.3 bits (60), Expect = 6.1 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = -1 Query: 511 NTVLSGGTTMYPGIADRMQKEITALAP 431 N ++GG TMY R+++E+ A+ P Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158 >SB_8479| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 548 Score = 28.3 bits (60), Expect = 6.1 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%) Frame = -2 Query: 378 GSVDRSSPPSLPSNRCGSRNRS----TTSLAPPLYTGSASKRTARRC 250 GS+ SP S P +R GSR R+ T+S A + +T ++C Sbjct: 338 GSIAPPSPTSTPRSRTGSRTRTPPTPTSSRASSRGSARGGAKTTKKC 384 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,566,667 Number of Sequences: 59808 Number of extensions: 485581 Number of successful extensions: 1359 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 1265 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1355 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1769412099 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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