Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30066
         (354 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0078 - 25656695-25656888,25656941-25657127,25657765-256580...    29   1.4  
10_05_0085 - 9005539-9005922,9006207-9006463,9006707-9006883,900...    27   3.2  
10_08_0452 - 18038182-18038253,18038338-18038415,18038502-180385...    27   4.2  
02_05_1226 + 35071407-35072001,35072139-35072836                       27   5.6  
01_01_0361 + 2838979-2841745,2841897-2842285                           26   7.4  
11_04_0134 - 13812569-13812699,13814167-13814565,13814890-138149...    26   9.8  
05_04_0184 - 18855062-18855604,18855889-18856611                       26   9.8  

>02_05_0078 -
           25656695-25656888,25656941-25657127,25657765-25658067,
           25658152-25658296,25658376-25658613,25658694-25658904,
           25659060-25659175,25659420-25659468
          Length = 480

 Score = 28.7 bits (61), Expect = 1.4
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = -2

Query: 191 CTRYFWGXDAVIPQLCKN*XGKDTPVCTFTKAEENPNIICIF 66
           C RY W  D   P+L     G+ TP     + +   ++I IF
Sbjct: 368 CCRYLWRLDLAAPKLAVAGSGRSTPEHMGRQGQGKGDVISIF 409


>10_05_0085 -
           9005539-9005922,9006207-9006463,9006707-9006883,
           9007349-9007490,9007814-9007904,9009024-9010942
          Length = 989

 Score = 27.5 bits (58), Expect = 3.2
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 198 FLRVCYKIKGKDTIELPDVTALK 266
           +++ C K KGK T+E+P  T +K
Sbjct: 928 YIQKCKKAKGKKTLEIPIKTTIK 950


>10_08_0452 -
           18038182-18038253,18038338-18038415,18038502-18038579,
           18039112-18039168,18039276-18039349,18039424-18039495,
           18039609-18039670,18039861-18039962,18040378-18040490,
           18040809-18040940,18041156-18041243,18041617-18041711,
           18041793-18042023,18042567-18042680,18042765-18042866,
           18043091-18043207,18043301-18044146
          Length = 810

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 19/62 (30%), Positives = 27/62 (43%)
 Frame = -1

Query: 258 LLHQGVRWCPSL*FCNKLEGSRMHPILLGARCCHTPIV*KLXGQRHPCMYLYQGRRKS*H 79
           +L  GV   P +  C+   G  + P+L  A    + I+ K  G  + C Y Y G R   H
Sbjct: 415 ILEVGVWKLPEI--CSFSIGVPVGPMLAKATKSVSEIIDKFQGLEYTCEYKYDGERAQIH 472

Query: 78  NL 73
            L
Sbjct: 473 CL 474


>02_05_1226 + 35071407-35072001,35072139-35072836
          Length = 430

 Score = 26.6 bits (56), Expect = 5.6
 Identities = 20/65 (30%), Positives = 35/65 (53%)
 Frame = -3

Query: 346 FFVFGSL*LRRGSRGQLWSQSLINLVAFKAVTSGSSMVSFPLIL*QTRRKQNAPDTFGGX 167
           +FV G   LR  +   +W+ +L++ +A  A   G  + SFP+ L +    +++   FGG 
Sbjct: 110 YFVAGGATLRSFA---VWA-ALVDDLASTA-RGGGDLGSFPVDLTEIATAESSNPRFGGK 164

Query: 166 MLSYP 152
            LS+P
Sbjct: 165 ALSFP 169


>01_01_0361 + 2838979-2841745,2841897-2842285
          Length = 1051

 Score = 26.2 bits (55), Expect = 7.4
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -2

Query: 311 IQGSALEPIPDKFSGLQ--GCYIREFDGVLP 225
           +QGS    I DKF G+Q  G    +F GV+P
Sbjct: 257 LQGSIPANIGDKFPGIQYFGLADNQFSGVIP 287


>11_04_0134 -
           13812569-13812699,13814167-13814565,13814890-13814981,
           13815241-13815446,13815559-13815651,13815779-13815835,
           13815928-13816056,13819704-13820024
          Length = 475

 Score = 25.8 bits (54), Expect = 9.8
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -2

Query: 314 GIQGSALEPIPDKFSGLQGCYIREFDGVLPFD 219
           G+Q S +E +  K      C +REF+G   ++
Sbjct: 274 GLQASRVEILKTKNGQFSSCMLREFNGTYKYN 305


>05_04_0184 - 18855062-18855604,18855889-18856611
          Length = 421

 Score = 25.8 bits (54), Expect = 9.8
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 183 SGAFCFLRVCYKIKGKDTIELPDVTALK 266
           S A  +++ C K KGK T E+P  T +K
Sbjct: 302 SAAKEYIQKCKKAKGKKTPEIPIKTTIK 329


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,467,450
Number of Sequences: 37544
Number of extensions: 162673
Number of successful extensions: 338
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 338
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 530315984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)