Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30065
         (852 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.1  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   9.4  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    21   9.4  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    21   9.4  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +3

Query: 609  KTKEQLEEEKK 641
            KTK++LEEEKK
Sbjct: 1068 KTKKELEEEKK 1078


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +3

Query: 609  KTKEQLEEEKK 641
            KTK++LEEEKK
Sbjct: 1068 KTKKELEEEKK 1078


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +3

Query: 609  KTKEQLEEEKK 641
            KTK++LEEEKK
Sbjct: 1068 KTKKELEEEKK 1078


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +3

Query: 609  KTKEQLEEEKK 641
            KTK++LEEEKK
Sbjct: 1068 KTKKELEEEKK 1078


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +2

Query: 674 HRGSLRRQTPTEGPGTLGVHRQTRDREIRSRREAKE--TGLRLKRAQRK 814
           H+ + + +TP      L + ++ RD++  S  E  E  + LRL   Q K
Sbjct: 112 HKPNRKPRTPFTTQQLLALEKKFRDKQYLSIAERAEFSSSLRLTEPQVK 160


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 189 SRPSIAGEGDPEFIKR 236
           SR  +AG+ DPE  KR
Sbjct: 38  SRWMVAGKADPEMPKR 53


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 189 SRPSIAGEGDPEFIKR 236
           SR  +AG+ DPE  KR
Sbjct: 38  SRWMVAGKADPEMPKR 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,402
Number of Sequences: 336
Number of extensions: 2198
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)