BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV30061 (739 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_03_0237 - 16723400-16723594,16723658-16723712,16724016-167241... 31 1.3 11_04_0411 - 17367432-17368247,17368317-17368658,17372221-17372793 30 1.7 03_05_0308 - 22977542-22978174,22978202-22978387 29 5.1 08_02_0459 + 17420156-17420976,17422291-17424199 28 6.7 03_05_0222 + 22082863-22082938,22083261-22083333,22083451-220834... 28 6.7 08_02_0064 - 11848060-11848476,11848518-11849090 28 8.9 06_03_1108 - 27661916-27662812,27662889-27663529,27663613-276645... 28 8.9 06_01_1084 + 8883301-8883515,8883736-8884063,8884764-8885022,888... 28 8.9 05_03_0428 + 13899295-13899669 28 8.9 03_01_0377 + 2940333-2940418,2940512-2940658,2940741-2940809,294... 28 8.9 >02_03_0237 - 16723400-16723594,16723658-16723712,16724016-16724126, 16724545-16724809,16725155-16725716 Length = 395 Score = 30.7 bits (66), Expect = 1.3 Identities = 20/65 (30%), Positives = 31/65 (47%) Frame = +3 Query: 417 QLRTLLPSTDLCHTQSELAYLTPWTAPTPYPSPDLTQ*PLRSTSPYQSTGPYRYPYLMQY 596 Q + P+ + +T + A +P +PTP SP PLR + Y+ P+ PY + Sbjct: 147 QCTSTTPTPSVPNTAAPPAPPSPPISPTPPGSPLPQISPLRVPNEYEYGKPF-LPYNLMC 205 Query: 597 PYPWS 611 PWS Sbjct: 206 ELPWS 210 >11_04_0411 - 17367432-17368247,17368317-17368658,17372221-17372793 Length = 576 Score = 30.3 bits (65), Expect = 1.7 Identities = 21/66 (31%), Positives = 27/66 (40%) Frame = +3 Query: 399 TSEYPFQLRTLLPSTDLCHTQSELAYLTPWTAPTPYPSPDLTQ*PLRSTSPYQSTGPYRY 578 T YP LL D+ T+S YL T P P+P++ PL ST Q Sbjct: 427 TPPYPPAFHALLGEVDMLATES-APYLVDPTVTQP-PAPEIVHTPLISTPSLQPGSSLET 484 Query: 579 PYLMQY 596 P + Y Sbjct: 485 PIQVDY 490 >03_05_0308 - 22977542-22978174,22978202-22978387 Length = 272 Score = 28.7 bits (61), Expect = 5.1 Identities = 20/53 (37%), Positives = 25/53 (47%) Frame = +3 Query: 399 TSEYPFQLRTLLPSTDLCHTQSELAYLTPWTAPTPYPSPDLTQ*PLRSTSPYQ 557 T YP L LL D+ T+S YL T P P+P++ PL TS Q Sbjct: 123 TPPYPPALHALLGEVDMLVTES-APYLVDPTVTQP-PAPEIVHTPLIPTSSPQ 173 >08_02_0459 + 17420156-17420976,17422291-17424199 Length = 909 Score = 28.3 bits (60), Expect = 6.7 Identities = 15/29 (51%), Positives = 18/29 (62%) Frame = +1 Query: 10 SEIVTTTNIKKNEGFHCSSFRGCLGSGRP 96 S+I+TTT I CSSFRG L + RP Sbjct: 302 SKIITTTRISDVARSCCSSFRGHLYNIRP 330 >03_05_0222 + 22082863-22082938,22083261-22083333,22083451-22083496, 22083639-22083753,22083847-22083926,22084022-22084621, 22084718-22084822,22084916-22085248 Length = 475 Score = 28.3 bits (60), Expect = 6.7 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = -3 Query: 170 STRGRKDQHSDPGVRCASEWFYWVQGRPEPRQPRKE 63 ST G DQ + +R A V+G+PEP +P+K+ Sbjct: 415 STGGTVDQKTIDSIRQAIGQNIQVKGQPEPSEPQKK 450 >08_02_0064 - 11848060-11848476,11848518-11849090 Length = 329 Score = 27.9 bits (59), Expect = 8.9 Identities = 12/37 (32%), Positives = 18/37 (48%) Frame = +1 Query: 619 WSTSPRSVPSGGTQACCRTSTRSSGCTLCEIRHRRPR 729 W+ PR++P GG+ + + S TL RR R Sbjct: 170 WTDEPRAIPRGGSFSITAANEESRTATLLPPSQRRAR 206 >06_03_1108 - 27661916-27662812,27662889-27663529,27663613-27664592, 27664854-27664934,27668582-27668634,27669294-27669308, 27670069-27670296 Length = 964 Score = 27.9 bits (59), Expect = 8.9 Identities = 13/21 (61%), Positives = 14/21 (66%) Frame = -1 Query: 523 VRSGDGYGVGAVHGVRYANSD 461 VRSG G G GA HGV NS+ Sbjct: 274 VRSGGGGGGGAAHGVLLLNSN 294 >06_01_1084 + 8883301-8883515,8883736-8884063,8884764-8885022, 8885581-8885681 Length = 300 Score = 27.9 bits (59), Expect = 8.9 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +1 Query: 619 WSTSPRSVPSGGTQACCRTSTRSSGC 696 W+ P S GT +C R +RSS C Sbjct: 121 WTRPPSSTRPSGTSSCSRWRSRSSVC 146 >05_03_0428 + 13899295-13899669 Length = 124 Score = 27.9 bits (59), Expect = 8.9 Identities = 14/36 (38%), Positives = 16/36 (44%) Frame = +1 Query: 622 STSPRSVPSGGTQACCRTSTRSSGCTLCEIRHRRPR 729 STS RS S CCR TR T ++ R R Sbjct: 87 STSSRSCRSPAPVCCCRHQTRPPSVTAAPVKRLRGR 122 >03_01_0377 + 2940333-2940418,2940512-2940658,2940741-2940809, 2940958-2941123,2941208-2941436,2941528-2942054 Length = 407 Score = 27.9 bits (59), Expect = 8.9 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +2 Query: 71 VVASVLGDPEPSKTIQKRSGHLGHYADLYGHGLSSGIAVHAGPAF 205 VVA LG +PS + + + L HY D GHGL + G F Sbjct: 167 VVAKWLGLTKPSSSGRLATRGLAHYPD--GHGLDPRFKMFVGHGF 209 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,564,463 Number of Sequences: 37544 Number of extensions: 281715 Number of successful extensions: 1180 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1053 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1170 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1945321620 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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