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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30061
         (739 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0237 - 16723400-16723594,16723658-16723712,16724016-167241...    31   1.3  
11_04_0411 - 17367432-17368247,17368317-17368658,17372221-17372793     30   1.7  
03_05_0308 - 22977542-22978174,22978202-22978387                       29   5.1  
08_02_0459 + 17420156-17420976,17422291-17424199                       28   6.7  
03_05_0222 + 22082863-22082938,22083261-22083333,22083451-220834...    28   6.7  
08_02_0064 - 11848060-11848476,11848518-11849090                       28   8.9  
06_03_1108 - 27661916-27662812,27662889-27663529,27663613-276645...    28   8.9  
06_01_1084 + 8883301-8883515,8883736-8884063,8884764-8885022,888...    28   8.9  
05_03_0428 + 13899295-13899669                                         28   8.9  
03_01_0377 + 2940333-2940418,2940512-2940658,2940741-2940809,294...    28   8.9  

>02_03_0237 -
           16723400-16723594,16723658-16723712,16724016-16724126,
           16724545-16724809,16725155-16725716
          Length = 395

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = +3

Query: 417 QLRTLLPSTDLCHTQSELAYLTPWTAPTPYPSPDLTQ*PLRSTSPYQSTGPYRYPYLMQY 596
           Q  +  P+  + +T +  A  +P  +PTP  SP     PLR  + Y+   P+  PY +  
Sbjct: 147 QCTSTTPTPSVPNTAAPPAPPSPPISPTPPGSPLPQISPLRVPNEYEYGKPF-LPYNLMC 205

Query: 597 PYPWS 611
             PWS
Sbjct: 206 ELPWS 210


>11_04_0411 - 17367432-17368247,17368317-17368658,17372221-17372793
          Length = 576

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 21/66 (31%), Positives = 27/66 (40%)
 Frame = +3

Query: 399 TSEYPFQLRTLLPSTDLCHTQSELAYLTPWTAPTPYPSPDLTQ*PLRSTSPYQSTGPYRY 578
           T  YP     LL   D+  T+S   YL   T   P P+P++   PL ST   Q       
Sbjct: 427 TPPYPPAFHALLGEVDMLATES-APYLVDPTVTQP-PAPEIVHTPLISTPSLQPGSSLET 484

Query: 579 PYLMQY 596
           P  + Y
Sbjct: 485 PIQVDY 490


>03_05_0308 - 22977542-22978174,22978202-22978387
          Length = 272

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 20/53 (37%), Positives = 25/53 (47%)
 Frame = +3

Query: 399 TSEYPFQLRTLLPSTDLCHTQSELAYLTPWTAPTPYPSPDLTQ*PLRSTSPYQ 557
           T  YP  L  LL   D+  T+S   YL   T   P P+P++   PL  TS  Q
Sbjct: 123 TPPYPPALHALLGEVDMLVTES-APYLVDPTVTQP-PAPEIVHTPLIPTSSPQ 173


>08_02_0459 + 17420156-17420976,17422291-17424199
          Length = 909

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +1

Query: 10  SEIVTTTNIKKNEGFHCSSFRGCLGSGRP 96
           S+I+TTT I       CSSFRG L + RP
Sbjct: 302 SKIITTTRISDVARSCCSSFRGHLYNIRP 330


>03_05_0222 +
           22082863-22082938,22083261-22083333,22083451-22083496,
           22083639-22083753,22083847-22083926,22084022-22084621,
           22084718-22084822,22084916-22085248
          Length = 475

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -3

Query: 170 STRGRKDQHSDPGVRCASEWFYWVQGRPEPRQPRKE 63
           ST G  DQ +   +R A      V+G+PEP +P+K+
Sbjct: 415 STGGTVDQKTIDSIRQAIGQNIQVKGQPEPSEPQKK 450


>08_02_0064 - 11848060-11848476,11848518-11849090
          Length = 329

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +1

Query: 619 WSTSPRSVPSGGTQACCRTSTRSSGCTLCEIRHRRPR 729
           W+  PR++P GG+ +    +  S   TL     RR R
Sbjct: 170 WTDEPRAIPRGGSFSITAANEESRTATLLPPSQRRAR 206


>06_03_1108 -
           27661916-27662812,27662889-27663529,27663613-27664592,
           27664854-27664934,27668582-27668634,27669294-27669308,
           27670069-27670296
          Length = 964

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = -1

Query: 523 VRSGDGYGVGAVHGVRYANSD 461
           VRSG G G GA HGV   NS+
Sbjct: 274 VRSGGGGGGGAAHGVLLLNSN 294


>06_01_1084 +
           8883301-8883515,8883736-8884063,8884764-8885022,
           8885581-8885681
          Length = 300

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 619 WSTSPRSVPSGGTQACCRTSTRSSGC 696
           W+  P S    GT +C R  +RSS C
Sbjct: 121 WTRPPSSTRPSGTSSCSRWRSRSSVC 146


>05_03_0428 + 13899295-13899669
          Length = 124

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = +1

Query: 622 STSPRSVPSGGTQACCRTSTRSSGCTLCEIRHRRPR 729
           STS RS  S     CCR  TR    T   ++  R R
Sbjct: 87  STSSRSCRSPAPVCCCRHQTRPPSVTAAPVKRLRGR 122


>03_01_0377 +
           2940333-2940418,2940512-2940658,2940741-2940809,
           2940958-2941123,2941208-2941436,2941528-2942054
          Length = 407

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +2

Query: 71  VVASVLGDPEPSKTIQKRSGHLGHYADLYGHGLSSGIAVHAGPAF 205
           VVA  LG  +PS + +  +  L HY D  GHGL     +  G  F
Sbjct: 167 VVAKWLGLTKPSSSGRLATRGLAHYPD--GHGLDPRFKMFVGHGF 209


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,564,463
Number of Sequences: 37544
Number of extensions: 281715
Number of successful extensions: 1180
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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