Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30061
         (739 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-3180|AAF53859.1|  311|Drosophila melanogaster CG16772-P...    32   0.71 
AY071734-1|AAL49356.1|  311|Drosophila melanogaster RH45234p pro...    29   5.0  
AE014298-2404|AAF48609.1|  511|Drosophila melanogaster CG9968-PB...    29   6.6  
AE014298-611|AAF45929.2|  483|Drosophila melanogaster CG32774-PA...    29   8.7  

>AE014134-3180|AAF53859.1|  311|Drosophila melanogaster CG16772-PA
           protein.
          Length = 311

 Score = 32.3 bits (70), Expect = 0.71
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = +3

Query: 456 TQSELAYLTPWTAPTPYPSPDLTQ*PLRSTSPYQSTGPYRYPYLMQYPYP 605
           T  E    TP T  T  P P   +       P+    P+ YPY +QYPYP
Sbjct: 118 TTPEPETTTPTTTTTTTPKPHKHEPHFH---PHSYPHPHPYPYPIQYPYP 164


>AY071734-1|AAL49356.1|  311|Drosophila melanogaster RH45234p
           protein.
          Length = 311

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 549 PYQSTGPYRYPYLMQYPYP 605
           P+    P+ YPY +QYPYP
Sbjct: 146 PHSYPHPHPYPYPIQYPYP 164


>AE014298-2404|AAF48609.1|  511|Drosophila melanogaster CG9968-PB,
           isoform B protein.
          Length = 511

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 21/57 (36%), Positives = 26/57 (45%)
 Frame = +3

Query: 435 PSTDLCHTQSELAYLTPWTAPTPYPSPDLTQ*PLRSTSPYQSTGPYRYPYLMQYPYP 605
           PS+ + H Q    Y  P  AP PYP       P+  ++PY S  P   PY    PYP
Sbjct: 52  PSSQM-HPQQHQQY--PGGAPAPYP-------PM--SAPYPSAAPSYPPYPTSNPYP 96


>AE014298-611|AAF45929.2|  483|Drosophila melanogaster CG32774-PA
           protein.
          Length = 483

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 17/55 (30%), Positives = 23/55 (41%)
 Frame = +3

Query: 399 TSEYPFQLRTLLPSTDLCHTQSELAYLTPWTAPTPYPSPDLTQ*PLRSTSPYQST 563
           TS  P    T LP+T      +      P T  TP P+   T  P  +T+P  +T
Sbjct: 269 TSTQPTTTTTPLPTTTTTPLPTTTTTPLPTTTTTPLPTTTSTPQPTTTTTPQPTT 323


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,203,906
Number of Sequences: 53049
Number of extensions: 436760
Number of successful extensions: 2343
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2321
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)