Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30060
(423 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.018
SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6) 31 0.30
SB_27863| Best HMM Match : rve (HMM E-Value=4.7e-35) 31 0.39
SB_27381| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.39
SB_38321| Best HMM Match : ZZ (HMM E-Value=8.1e-09) 30 0.91
SB_8849| Best HMM Match : F-box (HMM E-Value=0.86) 30 0.91
SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_31752| Best HMM Match : Bac_surface_Ag (HMM E-Value=0.0069) 23 3.5
SB_369| Best HMM Match : Pox_A32 (HMM E-Value=0.2) 28 3.7
SB_44762| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_14468| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_7343| Best HMM Match : EGF (HMM E-Value=0) 28 3.7
SB_30326| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
SB_4197| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
SB_31463| Best HMM Match : ABC2_membrane (HMM E-Value=3.1) 27 6.4
SB_13906| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_43060| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_1668| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_56768| Best HMM Match : VWA (HMM E-Value=0.0042) 27 8.5
SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3) 27 8.5
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 27 8.5
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 35.5 bits (78), Expect = 0.018
Identities = 31/103 (30%), Positives = 41/103 (39%)
Frame = +1
Query: 82 TVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKVVITKTDRTGKDFKTDN 261
T T +V AA + + A + + VTA A V T T T T
Sbjct: 194 TATATATATVTATVTAAASATAAVTATVTATVTVTVTATAATTVTATVTAATTV---TVT 250
Query: 262 MTATKIGMRTVPVATDIMATVTCQKVHITPRTVVSGMEKATAS 390
+TAT TV V + ATVT V +T T V+ AT +
Sbjct: 251 VTATAATTVTVTVTATVTATVTA-TVTVTATTTVTVTATATVT 292
Score = 33.9 bits (74), Expect = 0.056
Identities = 27/104 (25%), Positives = 36/104 (34%)
Frame = +1
Query: 79 ATVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKVVITKTDRTGKDFKTD 258
ATV T V V+V A + A + + TA T T T
Sbjct: 661 ATVTATATVTATVTVTATATATATVTVTATATVTATATATATATATATAATTTATATATA 720
Query: 259 NMTATKIGMRTVPVATDIMATVTCQKVHITPRTVVSGMEKATAS 390
+TAT + A TVT V +T V+ ATA+
Sbjct: 721 TVTATVTAAASATAAVTATVTVT---VTVTATVTVTAATAATAA 761
Score = 31.9 bits (69), Expect = 0.23
Identities = 34/111 (30%), Positives = 42/111 (37%)
Frame = +1
Query: 79 ATVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKVVITKTDRTGKDFKTD 258
ATV T V T + A T + + VKA A V +T T T T
Sbjct: 604 ATVTATVTV-TATATATVTVTVTATVTVTVIVTVKAAAATATATVTVTST-VTATATVTA 661
Query: 259 NMTATKIGMRTVPVATDIMATVTCQKVHITPRTVVSGMEKATASREDTRDA 411
+TAT TV V AT T V +T V+ ATA+ T A
Sbjct: 662 TVTATATVTATVTVTATATATAT---VTVTATATVTATATATATATATATA 709
Score = 31.1 bits (67), Expect = 0.39
Identities = 31/115 (26%), Positives = 41/115 (35%), Gaps = 5/115 (4%)
Frame = +1
Query: 82 TVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKVVIT----KTDRTGKDF 249
TV T V V+ A + A A + + VTA V++T T
Sbjct: 589 TVTATVTVTATVTATATVTATVTVTATATATVTVTVTATVTVTVIVTVKAAAATATATVT 648
Query: 250 KTDNMTATKIGMRTVPVATDIMATVTCQKVHITPRTV-VSGMEKATASREDTRDA 411
T +TAT TV + ATVT TV V+ TA+ T A
Sbjct: 649 VTSTVTATATVTATVTATATVTATVTVTATATATATVTVTATATVTATATATATA 703
Score = 29.5 bits (63), Expect = 1.2
Identities = 16/73 (21%), Positives = 31/73 (42%)
Frame = -2
Query: 362 TTVLGVMCTF*HVTVAIISVATGTVRMPILVAVILSVLKSFPVRSVLVITTLSAPIAVTA 183
TTV + VTV + + A TV + + V +V + V + +T +
Sbjct: 235 TTVTATVTAATTVTVTVTATAATTVTVTVTATVTATVTATVTVTATTTVTVTATATVTVI 294
Query: 182 LTIRESASAAMTV 144
+T+ + + +TV
Sbjct: 295 VTVTATLAVTVTV 307
Score = 29.5 bits (63), Expect = 1.2
Identities = 33/113 (29%), Positives = 40/113 (35%), Gaps = 8/113 (7%)
Frame = +1
Query: 76 VATVRETPRVDTDVSVAAAEAHRTVIA-------AEALSLIVKAVTAIGADKVVITKT-D 231
+ TV T V V+ AA A TV A A A + TA T T
Sbjct: 294 IVTVTATLAVTVTVTETAAAATATVTATVTTTTTATATATTTATATATTTATATATATAT 353
Query: 232 RTGKDFKTDNMTATKIGMRTVPVATDIMATVTCQKVHITPRTVVSGMEKATAS 390
T T TAT TV V + AT T TV + +ATA+
Sbjct: 354 ATATATVTATATATATVTATVTVTVTVTATATATVTATATVTVTAAAARATAT 406
Score = 27.9 bits (59), Expect = 3.7
Identities = 25/108 (23%), Positives = 32/108 (29%)
Frame = +1
Query: 79 ATVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKVVITKTDRTGKDFKTD 258
AT T V +V AA + V + + A V T T
Sbjct: 614 ATATATVTVTVTATVTVTVIVTVKAAAATATATVTVTSTVTATATVTATVTATATVTATV 673
Query: 259 NMTATKIGMRTVPVATDIMATVTCQKVHITPRTVVSGMEKATASREDT 402
+TAT TV V T T T + ATA+ T
Sbjct: 674 TVTATATATATVTVTATATVTATATATATATATATAATTTATATATAT 721
Score = 27.5 bits (58), Expect = 4.8
Identities = 22/84 (26%), Positives = 29/84 (34%), Gaps = 1/84 (1%)
Frame = +1
Query: 79 ATVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKVVITKTDRTGKDFK-T 255
ATV V+ + A A + + VTA V +T T T T
Sbjct: 205 ATVTAAASATAAVTATVTATVTVTVTATAATTVTATVTAATTVTVTVTATAATTVTVTVT 264
Query: 256 DNMTATKIGMRTVPVATDIMATVT 327
+TAT TV T + T T
Sbjct: 265 ATVTATVTATVTVTATTTVTVTAT 288
>SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2143
Score = 32.7 bits (71), Expect = 0.13
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Frame = +1
Query: 70 RTVATVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKV----VITKTDRT 237
RT V T RV TD+ V + + RT + + + + I D+V +T TDR
Sbjct: 1004 RTDLHVTSTDRVRTDLHVTSTDRVRTDLRVTSTDRVKTDLHVISTDRVRTDLHVTSTDRV 1063
Query: 238 GKDFK---TDNMTATKIGMRTVPVATDIMATVT 327
D + TD + A T V TD+ T T
Sbjct: 1064 RTDLRVSSTDRLRADLRVTSTDRVRTDLHVTST 1096
Score = 30.7 bits (66), Expect = 0.52
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
Frame = +1
Query: 85 VRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKV----VITKTDRTGKDFK 252
V T RV TD+ V + + RT + + + + I D+V +T TDR D +
Sbjct: 1105 VTSTDRVRTDLRVTSTDRVRTDLRVTSTDRVRTDLHVISTDRVRTDLRVTSTDRVRADLR 1164
Query: 253 TDNMTATKIGMR---TVPVATDIMATVT 327
+ + +R T V TD+ T T
Sbjct: 1165 VTSTDRVRTDLRVTSTDRVRTDLRVTST 1192
Score = 29.9 bits (64), Expect = 0.91
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +1
Query: 70 RTVATVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKVVITKTDRTGKDF 249
RT V T RV TD+ V + + RT L V + + D + +T TDR D
Sbjct: 920 RTDLRVISTDRVRTDLRVTSTDRVRT-------DLRVTSADRVRTD-LHVTSTDRVRTDL 971
Query: 250 KTDNMTATKIGMRTVP---VATDIMATVT 327
+ + + G+R + V TD+ T T
Sbjct: 972 RVTSTDRVRTGLRVISTDRVRTDLHVTST 1000
Score = 29.5 bits (63), Expect = 1.2
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Frame = +1
Query: 70 RTVATVRETPRVDTDVSVAAAEAHRT---VIAAEAL--SLIVKAVTAIGADKVVITKTDR 234
RT V T RV TD+ V + + RT VI+ + + L V + + AD + +T TDR
Sbjct: 1112 RTDLRVTSTDRVRTDLRVTSTDRVRTDLHVISTDRVRTDLRVTSTDRVRAD-LRVTSTDR 1170
Query: 235 TGKDFKTDNMTATKIGMR---TVPVATDIMATVT 327
D + + + +R T V D+ T T
Sbjct: 1171 VRTDLRVTSTDRVRTDLRVTSTDRVRADLRVTST 1204
Score = 29.5 bits (63), Expect = 1.2
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Frame = +1
Query: 70 RTVATVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKV----VITKTDRT 237
RT V T RV TD+ V + + RT + + + + I D+V +T TDR
Sbjct: 1220 RTYLRVISTDRVRTDLHVTSTDRVRTDLRVISTDRVRTDLHVISTDRVRTDLRVTSTDRV 1279
Query: 238 GKDFK---TDNMTATKIGMRTVPVATDIMATVT 327
D + TD + A T V TD+ T
Sbjct: 1280 RTDLRVTSTDRVRADLHVTSTDRVRTDLRVIST 1312
Score = 29.1 bits (62), Expect = 1.6
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Frame = +1
Query: 70 RTVATVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKV----VITKTDRT 237
RT V T RV TD+ V + + RT + + + + D+V +T TDR
Sbjct: 1316 RTDLRVTSTDRVKTDLHVISTDRVRTDLRVTSTDRVRTDLRVTSTDRVRADLHVTSTDRV 1375
Query: 238 GKDFKTDNMTATKIGMR---TVPVATDIMATVT 327
+ + + + +R T V TD+ T T
Sbjct: 1376 RTNLRVTSTDRVRTDLRVTSTDRVRTDLRVTST 1408
Score = 29.1 bits (62), Expect = 1.6
Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 7/125 (5%)
Frame = +1
Query: 70 RTVATVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKV----VITKTDRT 237
RT V T RV TD+ V + + RT + + + + D+V +T TDR
Sbjct: 1376 RTNLRVTSTDRVRTDLRVTSTDRVRTDLRVTSTDRVRTDLHVTSTDRVRTDLRVTSTDRV 1435
Query: 238 GKDFKTDNMTATKIGMR---TVPVATDIMATVTCQKVHITPRTVVSGMEKATASREDTRD 408
D + + +R T V TD + ++ +V T V S T R + D
Sbjct: 1436 RADLHVTSTDRVRTDLRVTSTDRVRTD-LHVISTDRVR-TYLRVTSADRVKTDLRVTSTD 1493
Query: 409 AVEEL 423
EE+
Sbjct: 1494 RAEEI 1498
Score = 28.7 bits (61), Expect = 2.1
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 7/93 (7%)
Frame = +1
Query: 70 RTVATVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKV----VITKTDRT 237
RT V T RV TD+ V + + RT + + + + I D+V + TDR
Sbjct: 872 RTDLRVISTDRVRTDLRVISTDRVRTYLHVMSTDRVRTDLRVISTDRVRTDLRVISTDRV 931
Query: 238 GKDFKTDNMTATKIGMRTVP---VATDIMATVT 327
D + + + +R V TD+ T T
Sbjct: 932 RTDLRVTSTDRVRTDLRVTSADRVRTDLHVTST 964
Score = 28.7 bits (61), Expect = 2.1
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = +1
Query: 70 RTVATVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKV----VITKTDRT 237
RT V T RV TD+ V + + R + + + + IG D+V + TDR
Sbjct: 1172 RTDLRVTSTDRVRTDLRVTSTDRVRADLRVTSTDRVKTDLRVIGTDRVRTYLRVISTDRV 1231
Query: 238 GKDFKTDNMTATKIGMRTVPVATDIMAT 321
D + + +R ++TD + T
Sbjct: 1232 RTDLHVTSTDRVRTDLRV--ISTDRVRT 1257
Score = 28.7 bits (61), Expect = 2.1
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 7/93 (7%)
Frame = +1
Query: 70 RTVATVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKV----VITKTDRT 237
RT V T RV TD+ V + + R + + + + I D+V +T TDR
Sbjct: 1268 RTDLRVTSTDRVRTDLRVTSTDRVRADLHVTSTDRVRTDLRVISTDRVRTDLRVTSTDRV 1327
Query: 238 GKDFKTDNMTATKIGMR---TVPVATDIMATVT 327
D + + +R T V TD+ T T
Sbjct: 1328 KTDLHVISTDRVRTDLRVTSTDRVRTDLRVTST 1360
Score = 27.9 bits (59), Expect = 3.7
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Frame = +1
Query: 70 RTVATVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKV----VITKTDRT 237
RT V T RV TD+ V + + RT + + + + D+V +T TDR
Sbjct: 1124 RTDLRVTSTDRVRTDLHVISTDRVRTDLRVTSTDRVRADLRVTSTDRVRTDLRVTSTDRV 1183
Query: 238 GKDFK---TDNMTATKIGMRTVPVATDI 312
D + TD + A T V TD+
Sbjct: 1184 RTDLRVTSTDRVRADLRVTSTDRVKTDL 1211
Score = 27.1 bits (57), Expect = 6.4
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Frame = +1
Query: 70 RTVATVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKV----VITKTDRT 237
RT V T RV TD+ V +A+ RT + + + + D+V + TDR
Sbjct: 932 RTDLRVTSTDRVRTDLRVTSADRVRTDLHVTSTDRVRTDLRVTSTDRVRTGLRVISTDRV 991
Query: 238 GKDF---KTDNMTATKIGMRTVPVATDIMATVT 327
D TD + T V TD+ T T
Sbjct: 992 RTDLHVTSTDRVRTDLHVTSTDRVRTDLHVTST 1024
Score = 26.6 bits (56), Expect = 8.5
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Frame = +1
Query: 25 IKKTIAEKMDRVQS*RTVATVRETPRVDTDVSVAAAEAHRT---VIAAEALS--LIVKAV 189
++K A K S + TV T RV TD+ V + + RT VI+ + + L V +
Sbjct: 845 VEKVKAAKDKLTISIKDSKTVISTDRVRTDLRVISTDRVRTDLRVISTDRVRTYLHVMST 904
Query: 190 TAIGADKVVITKTDRTGKDFKTDNMTATKIGMR---TVPVATDIMAT 321
+ D VI+ TDR D + + + +R T V TD+ T
Sbjct: 905 DRVRTDLRVIS-TDRVRTDLRVISTDRVRTDLRVTSTDRVRTDLRVT 950
>SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6)
Length = 269
Score = 31.5 bits (68), Expect = 0.30
Identities = 23/83 (27%), Positives = 28/83 (33%)
Frame = +1
Query: 79 ATVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKVVITKTDRTGKDFKTD 258
AT T T + A A A T A ++ A A T T
Sbjct: 137 ATATTTATAATATAAATATATGTTTATATVTATATATVTAAATATATATATATATTTSTA 196
Query: 259 NMTATKIGMRTVPVATDIMATVT 327
+TAT T AT + ATVT
Sbjct: 197 TVTATATVTVTATAATTVTATVT 219
Score = 31.5 bits (68), Expect = 0.30
Identities = 31/104 (29%), Positives = 38/104 (36%)
Frame = +1
Query: 79 ATVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKVVITKTDRTGKDFKTD 258
AT T + A T A + VTA A V T T T T
Sbjct: 170 ATATVTAAATATATATATATATTTSTATVTATATVTVTATAATTVTATVTAATTV---TV 226
Query: 259 NMTATKIGMRTVPVATDIMATVTCQKVHITPRTVVSGMEKATAS 390
+TAT TV V + ATVT V +T T V+ AT +
Sbjct: 227 TVTATAATTVTVTVTATVTATVTA-TVTVTATTTVTVTATATVT 269
Score = 27.5 bits (58), Expect = 4.8
Identities = 31/107 (28%), Positives = 37/107 (34%), Gaps = 3/107 (2%)
Frame = +1
Query: 79 ATVRETPRVDTDVSVAAAEAHRTVIAA---EALSLIVKAVTAIGADKVVITKTDRTGKDF 249
AT T T + A A A T A A + + TA T T T
Sbjct: 131 ATAAATATATTTATAATATAAATATATGTTTATATVTATATATVTAAATATAT-ATATAT 189
Query: 250 KTDNMTATKIGMRTVPVATDIMATVTCQKVHITPRTVVSGMEKATAS 390
T TAT TV V TVT +T T V+ ATA+
Sbjct: 190 ATTTSTATVTATATVTVTATAATTVTAT---VTAATTVTVTVTATAA 233
>SB_27863| Best HMM Match : rve (HMM E-Value=4.7e-35)
Length = 742
Score = 31.1 bits (67), Expect = 0.39
Identities = 13/40 (32%), Positives = 27/40 (67%)
Frame = -2
Query: 320 VAIISVATGTVRMPILVAVILSVLKSFPVRSVLVITTLSA 201
V I+++ G R+ ++A ++SVL ++PV + ++I TL +
Sbjct: 596 VVILNIPHGIPRIVGIIAFVISVLSTYPVPAHMLINTLQS 635
>SB_27381| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1392
Score = 31.1 bits (67), Expect = 0.39
Identities = 13/40 (32%), Positives = 27/40 (67%)
Frame = -2
Query: 320 VAIISVATGTVRMPILVAVILSVLKSFPVRSVLVITTLSA 201
V I+++ G R+ ++A ++SVL ++PV + ++I TL +
Sbjct: 1246 VVILNIPHGIPRIVGIIAFVISVLSTYPVPAHMLINTLQS 1285
>SB_38321| Best HMM Match : ZZ (HMM E-Value=8.1e-09)
Length = 584
Score = 29.9 bits (64), Expect = 0.91
Identities = 36/127 (28%), Positives = 48/127 (37%), Gaps = 4/127 (3%)
Frame = +1
Query: 46 KMDRVQS*RTVATVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKVVITK 225
K+D ++ V T R +VDT +V + RTV + + K TA KV +
Sbjct: 413 KVDTARTDFKVDTARTVFKVDTARTVFEVDTARTVFKVDTARTVFKVDTAPTVFKVDTAR 472
Query: 226 T----DRTGKDFKTDNMTATKIGMRTVPVATDIMATVTCQKVHITPRTVVSGMEKATASR 393
T D FK D T + TV + T KV T RTV T +
Sbjct: 473 TVFEVDTARTVFKVDT-ARTVFEVDTVRTVFKVDTARTVFKVD-TARTVFEVDTARTVFK 530
Query: 394 EDTRDAV 414
DT V
Sbjct: 531 VDTARTV 537
Score = 28.3 bits (60), Expect = 2.8
Identities = 36/128 (28%), Positives = 48/128 (37%), Gaps = 5/128 (3%)
Frame = +1
Query: 46 KMDRVQS*RTVATVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKV---- 213
K+D ++ V T R +VDT +V + RTV + + K TA KV
Sbjct: 404 KVDTARTDFKVDTARTDFKVDTARTVFKVDTARTVFEVDTARTVFKVDTARTVFKVDTAP 463
Query: 214 VITKTDRTGKDFKTDN-MTATKIGMRTVPVATDIMATVTCQKVHITPRTVVSGMEKATAS 390
+ K D F+ D T K+ D + TV KV T RTV T
Sbjct: 464 TVFKVDTARTVFEVDTARTVFKVDTARTVFEVDTVRTVF--KVD-TARTVFKVDTARTVF 520
Query: 391 REDTRDAV 414
DT V
Sbjct: 521 EVDTARTV 528
Score = 27.9 bits (59), Expect = 3.7
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +1
Query: 46 KMDRVQS*RTVATVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKVVITK 225
K+D ++ V TVR +VDT +V + RTV + + K TA KV +
Sbjct: 485 KVDTARTVFEVDTVRTVFKVDTARTVFKVDTARTVFEVDTARTVFKVDTARTVFKVDTAR 544
Query: 226 T 228
T
Sbjct: 545 T 545
Score = 26.6 bits (56), Expect = 8.5
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +1
Query: 31 KTIAEKMDRVQS*RTVATVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADK 210
+T+ E +D V++ V T R +VDT +V + RTV + + K TA K
Sbjct: 490 RTVFE-VDTVRTVFKVDTARTVFKVDTARTVFEVDTARTVFKVDTARTVFKVDTARTVFK 548
Query: 211 VVITKT 228
V +T
Sbjct: 549 VDTART 554
>SB_8849| Best HMM Match : F-box (HMM E-Value=0.86)
Length = 1222
Score = 29.9 bits (64), Expect = 0.91
Identities = 13/51 (25%), Positives = 30/51 (58%)
Frame = -2
Query: 326 VTVAIISVATGTVRMPILVAVILSVLKSFPVRSVLVITTLSAPIAVTALTI 174
+T+AI+S+ + + I++AVI+ ++ + V++I +S T++ I
Sbjct: 921 ITIAIMSITADIITIVIIIAVIIIIIITICPSIVIIIINISFVTKSTSIVI 971
>SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1296
Score = 28.7 bits (61), Expect = 2.1
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = -2
Query: 326 VTVAIISVATGTVRMPILVAVILSVLKSFPVRSVLVITTLSAPIAVTALTIRESASAAMT 147
VT +++++TG ++ V + L + ++ ITT S IA + L E+ + T
Sbjct: 485 VTSVMVTISTGVSQIVSWVTYTTTALVTMTTTAIASITTTSTDIATSTLVTTETKTDTAT 544
Query: 146 V 144
+
Sbjct: 545 L 545
>SB_31752| Best HMM Match : Bac_surface_Ag (HMM E-Value=0.0069)
Length = 354
Score = 23.4 bits (48), Expect(2) = 3.5
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 300 GDGYYGNGDVSEG 338
GDG YG+GD +G
Sbjct: 314 GDGDYGDGDYGDG 326
Score = 23.0 bits (47), Expect(2) = 3.5
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3
Query: 297 GGDGYYGNGD 326
GGDG YG+GD
Sbjct: 304 GGDGDYGDGD 313
>SB_369| Best HMM Match : Pox_A32 (HMM E-Value=0.2)
Length = 856
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -1
Query: 399 ILPGSR---CLLHTAHDRSRRDVHLLTRHRCHNIRRHRYGSHAY 277
+LP S CL H R R+ H L ++ C R R+ +H Y
Sbjct: 739 VLPDSANLDCLARRLHQRPLRERHELRKNDCRRCRCCRFITHYY 782
>SB_44762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 892
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -1
Query: 399 ILPGSR---CLLHTAHDRSRRDVHLLTRHRCHNIRRHRYGSHAY 277
+LP S CL H R R+ H L ++ C R R+ +H Y
Sbjct: 702 VLPDSANLDCLARRLHQRPLRERHELRKNDCRRCRCCRFITHYY 745
>SB_14468| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = -1
Query: 378 LLH--TAHDRSRRDVHL--LTRHRCHNIRRHRYGSH 283
LLH +H +S R +H+ LT RC +R+H+ H
Sbjct: 153 LLHKGASHYKSTRAIHMAQLTPQRCQPLRKHKSDPH 188
>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
Length = 1233
Score = 27.9 bits (59), Expect = 3.7
Identities = 17/93 (18%), Positives = 36/93 (38%)
Frame = +1
Query: 70 RTVATVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKVVITKTDRTGKDF 249
++ + T +DT +S + ++ +++ S T + IT +D G D
Sbjct: 470 KSTGVFKPTTAIDTQLSTITPTSPSSITSSDVGSTDTATSTPTSSPSSPITSSDVGGSDT 529
Query: 250 KTDNMTATKIGMRTVPVATDIMATVTCQKVHIT 348
+ + P +T + T+T + H T
Sbjct: 530 TSSLIIIDTTTSGITPTSTISVTTLTTTRTHTT 562
>SB_30326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1346
Score = 27.5 bits (58), Expect = 4.8
Identities = 26/112 (23%), Positives = 38/112 (33%)
Frame = +1
Query: 82 TVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKVVITKTDRTGKDFKTDN 261
T E R + + A A+ +A E S T + T T+ T + +T
Sbjct: 1157 TTTEPARTEATATAAEAKTEEPEVATEKPSETTTEATKAATE----TTTEATKPETETTT 1212
Query: 262 MTATKIGMRTVPVATDIMATVTCQKVHITPRTVVSGMEKATASREDTRDAVE 417
ATK T +AT T T + E A+ T +A E
Sbjct: 1213 -EATKPATETTTIATKAATKATIVATEATKPATETTTEATIAATRRTTEATE 1263
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 27.5 bits (58), Expect = 4.8
Identities = 28/125 (22%), Positives = 42/125 (33%), Gaps = 3/125 (2%)
Frame = +1
Query: 37 IAEKMDRVQS*RTVATVRETPR---VDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGAD 207
I+EK + + T ET V T A T S + A A A
Sbjct: 47 ISEKRKKTTTASLATTAPETTTASLVTTAPETTTASLATTAPETTTASFLTTAPEATTAP 106
Query: 208 KVVITKTDRTGKDFKTDNMTATKIGMRTVPVATDIMATVTCQKVHITPRTVVSGMEKATA 387
+ T + T ++ T + + T P AT T + P T + +AT
Sbjct: 107 ETTTASLVTTAPEATTASLATTALLVTTAPEATTASLVTTAPEATTAPETTTA--PEATT 164
Query: 388 SREDT 402
+ E T
Sbjct: 165 APETT 169
>SB_4197| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1
Query: 372 HTAHDRSRRDVHLLTRHRCHNIRRH 298
H H R D+H+ RH H RRH
Sbjct: 72 HDLHVNKRHDLHVNRRHDLHVNRRH 96
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1
Query: 372 HTAHDRSRRDVHLLTRHRCHNIRRH 298
H H R D+H+ RH H RRH
Sbjct: 80 HDLHVNRRHDLHVNRRHDLHVNRRH 104
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1
Query: 372 HTAHDRSRRDVHLLTRHRCHNIRRH 298
H H R D+H+ RH H RRH
Sbjct: 88 HDLHVNRRHDLHVNRRHDLHVNRRH 112
>SB_31463| Best HMM Match : ABC2_membrane (HMM E-Value=3.1)
Length = 268
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/64 (17%), Positives = 32/64 (50%)
Frame = -2
Query: 365 LTTVLGVMCTF*HVTVAIISVATGTVRMPILVAVILSVLKSFPVRSVLVITTLSAPIAVT 186
+T ++ ++ + IIS+ T + + ++ I++++ + + +IT + I +
Sbjct: 140 ITIIIAIITIIIAIITIIISIITIIIAIITIIIAIITIIIAIITNIIAIITIIIITITII 199
Query: 185 ALTI 174
+TI
Sbjct: 200 IITI 203
>SB_13906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 27.1 bits (57), Expect = 6.4
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = -2
Query: 329 HVTVAIISVATGTVRMPILVAVILSVLKSFPVRSVLVITTLSAPIAVTALTIRESASAAM 150
++ + ++ +AT + + AV +S S SVL + S+ +A T+ T S ++M
Sbjct: 343 YMLLTVLIIATNSTATTLAEAVAISSSVSPTTTSVLTSSMESSSMATTSTTSTPSLESSM 402
Query: 149 T 147
T
Sbjct: 403 T 403
>SB_43060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 26.6 bits (56), Expect = 8.5
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 202 ADKVVITKTDRTGKDFKTDNMTATKIGMRTVPVATD 309
AD VIT+T+ KD DN+ + R VP D
Sbjct: 355 ADSRVITETELDSKDTTADNLDGSHKYTRKVPQRDD 390
>SB_1668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 26.6 bits (56), Expect = 8.5
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 324 HRCHNIRRHRYGSHAYFGSRHIVCFEILPCSICFGNH 214
H C + + H+Y SRHI C + ICFG H
Sbjct: 54 HLCRSTYKFHKRLHSYMTSRHI-C-AVTSRHICFGLH 88
>SB_56768| Best HMM Match : VWA (HMM E-Value=0.0042)
Length = 815
Score = 26.6 bits (56), Expect = 8.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 282 AYFGSRHIVCFEILPCS 232
A F SRH C+E +PC+
Sbjct: 774 AAFASRHSTCYESVPCA 790
>SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3)
Length = 1165
Score = 26.6 bits (56), Expect = 8.5
Identities = 15/64 (23%), Positives = 34/64 (53%)
Frame = -2
Query: 371 IPLTTVLGVMCTF*HVTVAIISVATGTVRMPILVAVILSVLKSFPVRSVLVITTLSAPIA 192
+PL T+ ++ T+ + V T T+ +++ IL ++ + ++VITT+ +A
Sbjct: 697 LPLVTITTILPLVAITTILPLVVIT-TILPLVVITTILPLVAITTILPLVVITTILPLVA 755
Query: 191 VTAL 180
+T +
Sbjct: 756 ITTI 759
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 26.6 bits (56), Expect = 8.5
Identities = 15/56 (26%), Positives = 21/56 (37%)
Frame = -1
Query: 372 HTAHDRSRRDVHLLTRHRCHNIRRHRYGSHAYFGSRHIVCFEILPCSICFGNHHLV 205
H H H RHR + RH + H + RH F + +I HH +
Sbjct: 315 HRHHHHHHHHHHQRHRHRHRHRHRHHHHHHHEYNRRHRY-FTDINITIQIIRHHFI 369
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,940,654
Number of Sequences: 59808
Number of extensions: 199155
Number of successful extensions: 921
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 801830705
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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