Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30060
         (423 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003130-1|AAB54124.2|  423|Caenorhabditis elegans Hypothetical ...    29   1.0  
U97593-1|AAB52875.1|  715|Caenorhabditis elegans Hypothetical pr...    28   2.4  
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr...    27   4.2  
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p...    27   4.2  
AF067936-3|AAC19216.2|  922|Caenorhabditis elegans Hypothetical ...    27   4.2  
Z81527-9|CAI91172.1|  577|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z81527-6|CAB04275.1|  739|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z70208-11|CAA94144.1|  598|Caenorhabditis elegans Hypothetical p...    27   5.5  
Z46343-8|CAA86461.1|  549|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z35598-9|CAA84658.1|  549|Caenorhabditis elegans Hypothetical pr...    27   5.5  
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p...    27   5.5  
Z70680-2|CAA94573.1|  424|Caenorhabditis elegans Hypothetical pr...    27   7.3  
Z79597-2|CAB01860.2|  611|Caenorhabditis elegans Hypothetical pr...    26   9.7  
AL132841-7|CAB61033.1|  611|Caenorhabditis elegans Hypothetical ...    26   9.7  
AC024798-11|AAK29919.2|  299|Caenorhabditis elegans Hypothetical...    26   9.7  

>AF003130-1|AAB54124.2|  423|Caenorhabditis elegans Hypothetical
           protein F55A12.6 protein.
          Length = 423

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
 Frame = +3

Query: 246 FQNRQYDGYQNRHANRTGG----DGYYGNGDVSEG 338
           F NRQ  GY N + N   G    +GYYGNG    G
Sbjct: 113 FGNRQQIGYNNVYGNGYYGNGYNNGYYGNGYYGNG 147



 Score = 26.6 bits (56), Expect = 7.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 243 GFQNRQYDGYQNRHANRTGGDGYY 314
           G+ N   +GY N++    GG+GYY
Sbjct: 147 GYGNGYGNGYYNQYNGGYGGNGYY 170


>U97593-1|AAB52875.1|  715|Caenorhabditis elegans Hypothetical
           protein C46G7.3 protein.
          Length = 715

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
 Frame = -1

Query: 273 GSRHI--VCFEILPCSICFGNHHLVG 202
           G RH   +C+  L C+ C G HH  G
Sbjct: 655 GERHSSSMCYSTLKCTYCSGRHHPAG 680


>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical
           protein H05L14.2 protein.
          Length = 2162

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -1

Query: 354 SRRDVHLLTRHRCHNIRRHRYGSHAYFGS 268
           +  D+HL++R    N++R +Y     FGS
Sbjct: 502 TNEDLHLISRKLISNLKRKQYSGSGNFGS 530


>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
           protein H05L14.2 protein.
          Length = 2162

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -1

Query: 354 SRRDVHLLTRHRCHNIRRHRYGSHAYFGS 268
           +  D+HL++R    N++R +Y     FGS
Sbjct: 502 TNEDLHLISRKLISNLKRKQYSGSGNFGS 530


>AF067936-3|AAC19216.2|  922|Caenorhabditis elegans Hypothetical
           protein C24G6.3 protein.
          Length = 922

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -3

Query: 61  GLGPSFLQSSSLSVTGERRP 2
           GLGP FL +   SV+GER P
Sbjct: 153 GLGPDFLATFMKSVSGERDP 172


>Z81527-9|CAI91172.1|  577|Caenorhabditis elegans Hypothetical
           protein F35E12.7d protein.
          Length = 577

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +1

Query: 268 ATKIGMRTVPVATDIMATVTCQKVHITPRTVVSGMEKATAS 390
           AT++   T PV + + +T+T Q +  T ++      K T S
Sbjct: 500 ATRVSSSTAPVVSTVTSTITSQSIVTTNKSSSPITSKTTTS 540


>Z81527-6|CAB04275.1|  739|Caenorhabditis elegans Hypothetical
           protein F35E12.7a protein.
          Length = 739

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +1

Query: 268 ATKIGMRTVPVATDIMATVTCQKVHITPRTVVSGMEKATAS 390
           AT++   T PV + + +T+T Q +  T ++      K T S
Sbjct: 500 ATRVSSSTAPVVSTVTSTITSQSIVTTNKSSSPITSKTTTS 540


>Z70208-11|CAA94144.1|  598|Caenorhabditis elegans Hypothetical
           protein F54B11.11 protein.
          Length = 598

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = -2

Query: 311 ISVATGTVRMPILVAVILSVLKSFPVRSVLVITTLSAPIAVTALT 177
           I+ A+GT   PIL  +  S  K+  + S   ITT  A I  T  T
Sbjct: 464 ITAASGTTTQPILSTMTSSTTKT--LTSTTTITTTKANILTTTAT 506


>Z46343-8|CAA86461.1|  549|Caenorhabditis elegans Hypothetical
           protein F10F2.9 protein.
          Length = 549

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 231 SNREGFQNRQYDGYQNRHANRTGGDGYYGNGD 326
           +N   F ++  +   N++ NR  GD Y GNG+
Sbjct: 166 NNNNNFNSK--NNRMNKYGNRNDGDDYNGNGN 195


>Z35598-9|CAA84658.1|  549|Caenorhabditis elegans Hypothetical
           protein F10F2.9 protein.
          Length = 549

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 231 SNREGFQNRQYDGYQNRHANRTGGDGYYGNGD 326
           +N   F ++  +   N++ NR  GD Y GNG+
Sbjct: 166 NNNNNFNSK--NNRMNKYGNRNDGDDYNGNGN 195


>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
           protein R11G1.1 protein.
          Length = 1656

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +1

Query: 253 TDNMTATKIGMRTVPVATDIMATVTCQKVHITPRTVVSGMEKATASR 393
           T+N   T+I     P  T + AT   + +H+ P  VV  ++   +++
Sbjct: 513 TNNAQTTQIDRNLTPKTTTLKATSRTKIIHVGPNGVVEEIDNNESTK 559


>Z70680-2|CAA94573.1|  424|Caenorhabditis elegans Hypothetical
           protein C25G4.4 protein.
          Length = 424

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +1

Query: 307 DIMATVTCQ-KVHITPRTVVSGMEKATASREDTRDAVEEL 423
           DI +T+  +  V   PRT  S  E    +RE T + VEEL
Sbjct: 363 DIQSTLAEEHSVKYQPRTSSSSQESLHTAREFTEEKVEEL 402


>Z79597-2|CAB01860.2|  611|Caenorhabditis elegans Hypothetical
           protein C33A11.1 protein.
          Length = 611

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -1

Query: 360 DRSRRDVHLLTRHRCHNIRRHRYGSHAY 277
           D  ++D  LL R   HN+R    GSH Y
Sbjct: 140 DEQKKDGDLLGRGPVHNVRVATGGSHPY 167


>AL132841-7|CAB61033.1|  611|Caenorhabditis elegans Hypothetical
           protein C33A11.1 protein.
          Length = 611

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -1

Query: 360 DRSRRDVHLLTRHRCHNIRRHRYGSHAY 277
           D  ++D  LL R   HN+R    GSH Y
Sbjct: 140 DEQKKDGDLLGRGPVHNVRVATGGSHPY 167


>AC024798-11|AAK29919.2|  299|Caenorhabditis elegans Hypothetical
           protein Y48G9A.2 protein.
          Length = 299

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +1

Query: 370 MEKATASREDTRDAVEEL 423
           MEK  A+ +DTRDA+ EL
Sbjct: 207 MEKELAAEKDTRDALREL 224


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,785,080
Number of Sequences: 27780
Number of extensions: 133520
Number of successful extensions: 462
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)