Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30059X
(479 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 166 8e-42
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 166 8e-42
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 166 8e-42
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 166 8e-42
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 166 8e-42
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 166 8e-42
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 166 8e-42
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 166 8e-42
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 166 8e-42
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 160 6e-40
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 158 2e-39
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 95 2e-20
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 89 2e-18
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 70 1e-12
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 57 6e-09
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 55 3e-08
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 37 0.007
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 37 0.007
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 31 0.43
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 29 2.3
Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical pr... 27 7.0
AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein. 27 7.0
Z96100-3|CAD60418.1| 893|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z96100-2|CAD60417.1| 912|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z96100-1|CAB09530.2| 964|Caenorhabditis elegans Hypothetical pr... 27 9.3
AY150817-1|AAN61051.1| 893|Caenorhabditis elegans ADR-1E protein. 27 9.3
AY150816-1|AAN61050.1| 912|Caenorhabditis elegans ADR-1D protein. 27 9.3
AY150815-1|AAN61049.1| 964|Caenorhabditis elegans ADR-1C protein. 27 9.3
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 166 bits (403), Expect = 8e-42
Identities = 76/80 (95%), Positives = 79/80 (98%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
NTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 356
Query: 297 WISKEEYDESGPGIVHRKCF 238
WISK+EYDESGP IVHRKCF
Sbjct: 357 WISKQEYDESGPSIVHRKCF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 166 bits (403), Expect = 8e-42
Identities = 76/80 (95%), Positives = 79/80 (98%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
NTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 356
Query: 297 WISKEEYDESGPGIVHRKCF 238
WISK+EYDESGP IVHRKCF
Sbjct: 357 WISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 166 bits (403), Expect = 8e-42
Identities = 76/80 (95%), Positives = 79/80 (98%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
NTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 356
Query: 297 WISKEEYDESGPGIVHRKCF 238
WISK+EYDESGP IVHRKCF
Sbjct: 357 WISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 166 bits (403), Expect = 8e-42
Identities = 76/80 (95%), Positives = 79/80 (98%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
NTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 356
Query: 297 WISKEEYDESGPGIVHRKCF 238
WISK+EYDESGP IVHRKCF
Sbjct: 357 WISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 166 bits (403), Expect = 8e-42
Identities = 76/80 (95%), Positives = 79/80 (98%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
NTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 356
Query: 297 WISKEEYDESGPGIVHRKCF 238
WISK+EYDESGP IVHRKCF
Sbjct: 357 WISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 166 bits (403), Expect = 8e-42
Identities = 76/80 (95%), Positives = 79/80 (98%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
NTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 356
Query: 297 WISKEEYDESGPGIVHRKCF 238
WISK+EYDESGP IVHRKCF
Sbjct: 357 WISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 166 bits (403), Expect = 8e-42
Identities = 76/80 (95%), Positives = 79/80 (98%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
NTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 253 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 312
Query: 297 WISKEEYDESGPGIVHRKCF 238
WISK+EYDESGP IVHRKCF
Sbjct: 313 WISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 166 bits (403), Expect = 8e-42
Identities = 76/80 (95%), Positives = 79/80 (98%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
NTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 283 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 342
Query: 297 WISKEEYDESGPGIVHRKCF 238
WISK+EYDESGP IVHRKCF
Sbjct: 343 WISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 166 bits (403), Expect = 8e-42
Identities = 76/80 (95%), Positives = 79/80 (98%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
NTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 356
Query: 297 WISKEEYDESGPGIVHRKCF 238
WISK+EYDESGP IVHRKCF
Sbjct: 357 WISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 160 bits (388), Expect = 6e-40
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
NTV+SGGTTMYPGIADRMQKEITALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQM 355
Query: 297 WISKEEYDESGPGIVHRKCF 238
WISK+EYDESGP IVHRKCF
Sbjct: 356 WISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 158 bits (383), Expect = 2e-39
Identities = 72/80 (90%), Positives = 77/80 (96%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
NTV+SGGT+M+PGIADRMQKEI LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 296 NTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 355
Query: 297 WISKEEYDESGPGIVHRKCF 238
WISK+EYDESGP IVHRKCF
Sbjct: 356 WISKQEYDESGPSIVHRKCF 375
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/82 (51%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP---ERKYSVWIGGSILASLSTF 307
N ++GG ++ G +R+ + P TIK+++ A P ERKY WIGGSIL SL TF
Sbjct: 354 NVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTF 413
Query: 306 QQMWISKEEYDESGPGIVHRKC 241
QQMW+SK EYDESG IV +KC
Sbjct: 414 QQMWVSKAEYDESGKSIVEKKC 435
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 89.0 bits (211), Expect = 2e-18
Identities = 38/80 (47%), Positives = 56/80 (70%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
N V+SGGTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++M
Sbjct: 295 NIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKM 354
Query: 297 WISKEEYDESGPGIVHRKCF 238
W+ K+EY++ G +H++ F
Sbjct: 355 WLGKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 69.7 bits (163), Expect = 1e-12
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 13/82 (15%)
Frame = -3
Query: 471 VMSGGTTMYPGIADRMQKEITAL-----------APSTIKIKIIAPPERKYSVWIGGSIL 325
V+SGGTTMYPG+ R++KE+ L A KI+I APP RK+ V++GG++L
Sbjct: 302 VLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVL 361
Query: 324 ASL--STFQQMWISKEEYDESG 265
A+L Q W+SK+EY+E G
Sbjct: 362 ANLMKDRDQDFWVSKKEYEEGG 383
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 57.2 bits (132), Expect = 6e-09
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 16/90 (17%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALA----------------PSTIKIKIIAPPERKYSV 346
N V+SGG+TM+ A ++Q+++ L+ P I +++I+ ++Y+V
Sbjct: 325 NIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAV 384
Query: 345 WIGGSILASLSTFQQMWISKEEYDESGPGI 256
W GGS+LAS S F Q+ +K EY E GP I
Sbjct: 385 WFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 54.8 bits (126), Expect = 3e-08
Identities = 22/66 (33%), Positives = 44/66 (66%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
N ++GG ++ PGIA+++++E++ + P+TI ++ P R + ++G I+AS STF+
Sbjct: 474 NIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDS 533
Query: 297 WISKEE 280
IS ++
Sbjct: 534 CISLQQ 539
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI---IAPPERKYSVWIGGSILASLSTF 307
N ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L+
Sbjct: 311 NIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTAS 366
Query: 306 QQMWISKEEYDESGPGI 256
+ WI+++++DE G +
Sbjct: 367 KVPWINRKDWDERGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI---IAPPERKYSVWIGGSILASLSTF 307
N ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L+
Sbjct: 311 NIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTAS 366
Query: 306 QQMWISKEEYDESGPGI 256
+ WI+++++DE G +
Sbjct: 367 KVPWINRKDWDERGDSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 31.1 bits (67), Expect = 0.43
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITAL-APSTIKIKIIAP----PERK----YSVWIGGSIL 325
N +++GG + PG+ R+++EI + + KI +I E K + W+G S+L
Sbjct: 212 NILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIKNTPLFVSWLGASLL 271
Query: 324 ASL-STFQQMWISKEEY 277
SL T ++ ++ EE+
Sbjct: 272 GSLRETIERKSLTLEEW 288
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 445 PRYRRQDAEGDHRPRALDHQDQDHRSPREEVLR 347
P+YRRQ L Q Q HR PRE +L+
Sbjct: 181 PKYRRQVMHCSKSEHKLVLQTQKHRLPRERMLK 213
>Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical
protein K10D3.2 protein.
Length = 665
Score = 27.1 bits (57), Expect = 7.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 403 RALDHQDQDHRSPREEVLRMDRW 335
R +D D + R EE++R DRW
Sbjct: 134 RFVDVNDNEIREANEEIIRKDRW 156
>AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein.
Length = 665
Score = 27.1 bits (57), Expect = 7.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 403 RALDHQDQDHRSPREEVLRMDRW 335
R +D D + R EE++R DRW
Sbjct: 134 RFVDVNDNEIREANEEIIRKDRW 156
>Z96100-3|CAD60418.1| 893|Caenorhabditis elegans Hypothetical
protein H15N14.1e protein.
Length = 893
Score = 26.6 bits (56), Expect = 9.3
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -3
Query: 411 TALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRK 244
+AL+ + KIIA KYS S + ++ + KEE D +G + + K
Sbjct: 236 SALSLLDLMQKIIAESAEKYSPVFEASEVPKDPEIPEVEVKKEEVDTNGENVANEK 291
>Z96100-2|CAD60417.1| 912|Caenorhabditis elegans Hypothetical
protein H15N14.1d protein.
Length = 912
Score = 26.6 bits (56), Expect = 9.3
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -3
Query: 411 TALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRK 244
+AL+ + KIIA KYS S + ++ + KEE D +G + + K
Sbjct: 236 SALSLLDLMQKIIAESAEKYSPVFEASEVPKDPEIPEVEVKKEEVDTNGENVANEK 291
>Z96100-1|CAB09530.2| 964|Caenorhabditis elegans Hypothetical
protein H15N14.1c protein.
Length = 964
Score = 26.6 bits (56), Expect = 9.3
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -3
Query: 411 TALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRK 244
+AL+ + KIIA KYS S + ++ + KEE D +G + + K
Sbjct: 307 SALSLLDLMQKIIAESAEKYSPVFEASEVPKDPEIPEVEVKKEEVDTNGENVANEK 362
>AY150817-1|AAN61051.1| 893|Caenorhabditis elegans ADR-1E protein.
Length = 893
Score = 26.6 bits (56), Expect = 9.3
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -3
Query: 411 TALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRK 244
+AL+ + KIIA KYS S + ++ + KEE D +G + + K
Sbjct: 236 SALSLLDLMQKIIAESAEKYSPVFEASEVPKDPEIPEVEVKKEEVDTNGENVANEK 291
>AY150816-1|AAN61050.1| 912|Caenorhabditis elegans ADR-1D protein.
Length = 912
Score = 26.6 bits (56), Expect = 9.3
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -3
Query: 411 TALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRK 244
+AL+ + KIIA KYS S + ++ + KEE D +G + + K
Sbjct: 236 SALSLLDLMQKIIAESAEKYSPVFEASEVPKDPEIPEVEVKKEEVDTNGENVANEK 291
>AY150815-1|AAN61049.1| 964|Caenorhabditis elegans ADR-1C protein.
Length = 964
Score = 26.6 bits (56), Expect = 9.3
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -3
Query: 411 TALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRK 244
+AL+ + KIIA KYS S + ++ + KEE D +G + + K
Sbjct: 307 SALSLLDLMQKIIAESAEKYSPVFEASEVPKDPEIPEVEVKKEEVDTNGENVANEK 362
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,438,516
Number of Sequences: 27780
Number of extensions: 179978
Number of successful extensions: 526
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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