Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30058
(547 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 79 4e-16
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 47 2e-06
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 47 2e-06
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 40 3e-04
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 33 0.036
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 29 0.34
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 29 0.34
SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces pomb... 27 1.4
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 27 1.8
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 26 3.2
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 26 4.2
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 26 4.2
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 4.2
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 25 7.3
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 25 7.3
SPCC594.06c |||SNARE Vam7 |Schizosaccharomyces pombe|chr 3|||Manual 25 7.3
SPBC1773.11c |mug89||CDC50 domain protein|Schizosaccharomyces po... 25 9.6
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 79.0 bits (186), Expect = 4e-16
Identities = 36/102 (35%), Positives = 63/102 (61%)
Frame = -1
Query: 547 ELIEEVDADKSGRLEFPEFVTLAAKFIVEEDAEAMQKELREAFRLYDKEGNGYIPTSSLR 368
++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAF+++DK+GNGYI L
Sbjct: 52 DMINEVDADGNGTIDFTEFLTMMARKMKDTDNE---EEVREAFKVFDKDGNGYITVEELT 108
Query: 367 EIXXXXXXXXXXXXXXXLIQEIDTDGSGTVDFDEFMEMMTGE 242
+ +I+E DTDG G ++++EF +++ +
Sbjct: 109 HVLTSLGERLSQEEVADMIREADTDGDGVINYEEFSRVISSK 150
Score = 50.0 bits (114), Expect = 2e-07
Identities = 23/62 (37%), Positives = 35/62 (56%)
Frame = -1
Query: 436 ELREAFRLYDKEGNGYIPTSSLREIXXXXXXXXXXXXXXXLIQEIDTDGSGTVDFDEFME 257
E REAF L+D++ +G I ++ L + +I E+D DG+GT+DF EF+
Sbjct: 13 EFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLT 72
Query: 256 MM 251
MM
Sbjct: 73 MM 74
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 47.2 bits (107), Expect = 2e-06
Identities = 27/102 (26%), Positives = 48/102 (47%)
Frame = -1
Query: 547 ELIEEVDADKSGRLEFPEFVTLAAKFIVEEDAEAMQKELREAFRLYDKEGNGYIPTSSLR 368
+++ + D G L+ +FV + + IVE D +E++ AF L+D + G I +LR
Sbjct: 77 KILRDFDKTGKGYLQMEDFVRVMTEKIVERDP---LEEIKRAFELFDDDETGKISLRNLR 133
Query: 367 EIXXXXXXXXXXXXXXXLIQEIDTDGSGTVDFDEFMEMMTGE 242
+ +I+E D D G ++ EF+ +M E
Sbjct: 134 RVAKELNENIDDQELEAMIEEFDLDQDGEINEQEFIAIMMDE 175
Score = 33.9 bits (74), Expect = 0.016
Identities = 16/71 (22%), Positives = 33/71 (46%)
Frame = -1
Query: 460 EDAEAMQKELREAFRLYDKEGNGYIPTSSLREIXXXXXXXXXXXXXXXLIQEIDTDGSGT 281
E E ++++ EAF+L+D + + I LR ++++ D G G
Sbjct: 30 EITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGY 89
Query: 280 VDFDEFMEMMT 248
+ ++F+ +MT
Sbjct: 90 LQMEDFVRVMT 100
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 46.8 bits (106), Expect = 2e-06
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Frame = -1
Query: 544 LIEEVDADKSGRLEFPEFVTLAAKFIVEEDAEAMQKELREAFRLYDKEGNGYIPTSSL-- 371
L VD D G ++F EF+ + F V + E ++L+ AF++YD + +GYI L
Sbjct: 61 LFSVVDEDGGGDVDFQEFINSLSVFSVHGNKE---EKLKFAFKIYDIDRDGYISNGELYL 117
Query: 370 ---REIXXXXXXXXXXXXXXXLIQEIDTDGSGTVDFDEFMEMMTG 245
+ I E+D D G + F+EF ++++G
Sbjct: 118 VLKMMVGTNLREDQLQQIVDKTIMEVDKDRDGKISFEEFKDIVSG 162
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 39.5 bits (88), Expect = 3e-04
Identities = 20/80 (25%), Positives = 42/80 (52%)
Frame = -1
Query: 496 EFVTLAAKFIVEEDAEAMQKELREAFRLYDKEGNGYIPTSSLREIXXXXXXXXXXXXXXX 317
+F++ + + E ++E +E +AFR++DK+ +GYI T+ +
Sbjct: 62 KFMSFVSNKLRETESE---EEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQL 118
Query: 316 LIQEIDTDGSGTVDFDEFME 257
++QE D SG+ D+ +F++
Sbjct: 119 MVQEADPTNSGSFDYYDFVQ 138
Score = 29.1 bits (62), Expect = 0.45
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -1
Query: 436 ELREAFRLYDKEGNGYIPTSSLREI 362
E++EAF LYD + +G IPTS + +
Sbjct: 10 EMKEAFVLYDIDKDGLIPTSHVGSV 34
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 32.7 bits (71), Expect = 0.036
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = -1
Query: 529 DADKSGRLEFPEFVTLAAKFIVEEDAEAMQKELREAFRLYDKEGNGYIPTSSLREI 362
DADK+G ++F EF+ + V E + +L AF+LYD + NG I + I
Sbjct: 73 DADKNGYIDFKEFICALS---VTSRGE-LNDKLIWAFQLYDLDNNGLISYDEMLRI 124
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 29.5 bits (63), Expect = 0.34
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 263 ELVEVDGAASVSV-DLLDEAIEFIVSQLLVQFPEDLAQARRGNVTVAFLVVQSERFPEFF 439
EL V A S DL D AI ++Q+L F +DL + VT+ + +P ++
Sbjct: 1246 ELTNVVNVALTSTGDLDDSAIVSKLNQILSDFRDDLLEHNVRRVTIVGGRINKSAYPSYY 1305
Query: 440 LHGLS 454
+ +S
Sbjct: 1306 TYRVS 1310
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 29.5 bits (63), Expect = 0.34
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = -1
Query: 430 REAFRLYDKEGNGYIPTSSLREIXXXXXXXXXXXXXXXLIQEIDTDGSGTVDFDEFMEMM 251
++AF L+D+ G G IP +S+ ++ I EI++ VD ++F++++
Sbjct: 9 KQAFSLFDRHGTGRIPKTSIGDL----LRACGQNPTLAEITEIESTLPAEVDMEQFLQVL 64
>SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 27.5 bits (58), Expect = 1.4
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +3
Query: 483 RVTNSGNSRRPDLSASTSSIS 545
RVT SGNSRR LS S S+S
Sbjct: 267 RVTASGNSRRRPLSRSIHSLS 287
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 27.1 bits (57), Expect = 1.8
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 439 KELREAFRLYDKEGNGYI 386
+EL+EAF L DK+G+G I
Sbjct: 48 QELKEAFALLDKDGDGNI 65
>SPAC110.02 |pds5||cohesin-associated protein
Pds5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1205
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 18 VDNIKYNSTTPDQLRTINYSLYNTYIILEKLADR 119
V+N++YN P +L T+ T +EK+AD+
Sbjct: 747 VENLEYNGGLPVRLMTLGQLFLYTLEEVEKVADQ 780
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 547 ELIEEVDADKSGRLEFPEF 491
E ++ DAD SG+L F EF
Sbjct: 337 ETFQKADADHSGKLSFEEF 355
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 445 MQKELREAFRLYDKEGNGYIPTSSLR 368
M +E EAF L+D GYI LR
Sbjct: 10 MDEEAEEAFDLFDVTHKGYIDFEDLR 35
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.8 bits (54), Expect = 4.2
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 369 ARSSGNWTSS*LTMNSMASSKRSTLTEAAPSTSTSS 262
A ++G+ TSS T + SS S T +A +STSS
Sbjct: 968 ASATGSSTSSIATASVSGSSTSSVATASATDSSTSS 1003
Score = 25.4 bits (53), Expect = 5.5
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -2
Query: 375 ACARSSGNWTSS*LTMNSMASSKRSTLTEAAPSTSTSS 262
A A +G+ TSS T + SS S T +A +STSS
Sbjct: 1005 AAASVTGSSTSSVATASVTDSSTSSVATASATDSSTSS 1042
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 547 ELIEEVDADKSGRLEFPEFV 488
E I EV+ D SGR+E +FV
Sbjct: 58 EAIREVNVDSSGRVEPEDFV 77
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 25.0 bits (52), Expect = 7.3
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1
Query: 499 PEFVTLAAKFIVEEDAEAMQKELREAFRLYDKEG 398
PEF AA+ +VEED E + EA + D+EG
Sbjct: 38 PEFSDEAAEALVEEDIEDLD---GEALDVEDEEG 68
>SPCC594.06c |||SNARE Vam7 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 341
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -2
Query: 378 RACARSSGNWTSS*LTMNSMASSKRSTLTEAAPSTSTSSW 259
R C S +W SS +T + S+R L S + W
Sbjct: 59 RLCKLPSKSWVSSTVTNEKLRESRRLALQAYVQCLSETPW 98
>SPBC1773.11c |mug89||CDC50 domain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 396
Score = 24.6 bits (51), Expect = 9.6
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 15 SVDNIKYNSTTPDQLRTINYSLYNTYIILEKLADRYCFVAAN*C 146
+V + KY ++ DQ TI + +TY LEK+ D+ + N C
Sbjct: 92 AVPSKKYTASF-DQSGTIGFDKESTYWKLEKILDKDLDMDVNYC 134
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,802,571
Number of Sequences: 5004
Number of extensions: 30494
Number of successful extensions: 134
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 127
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 225926624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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