Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30057
(631 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 26 0.26
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 26 0.26
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 3.2
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 3.2
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 3.2
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 4.3
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 5.7
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 5.7
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 5.7
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 5.7
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 5.7
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 5.7
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 21 9.9
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 26.2 bits (55), Expect = 0.26
Identities = 9/21 (42%), Positives = 18/21 (85%)
Frame = -2
Query: 615 VVTKNTDTGLLRGLVIGISTL 553
+ +++TD GL+ G+VIG+++L
Sbjct: 123 LTSESTDPGLVAGIVIGVTSL 143
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 26.2 bits (55), Expect = 0.26
Identities = 9/21 (42%), Positives = 18/21 (85%)
Frame = -2
Query: 615 VVTKNTDTGLLRGLVIGISTL 553
+ +++TD GL+ G+VIG+++L
Sbjct: 94 LTSESTDPGLVAGIVIGVTSL 114
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 3.2
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
Frame = +2
Query: 128 VAIRMPPVIPINH-----YLGVLKTN 190
+A+ PPV+P NH YL V++ N
Sbjct: 353 LAVPAPPVLPENHLKNAKYLDVIERN 378
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 3.2
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
Frame = +2
Query: 128 VAIRMPPVIPINH-----YLGVLKTN 190
+A+ PPV+P NH YL V++ N
Sbjct: 353 LAVPAPPVLPENHLKNAKYLDVIERN 378
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 3.2
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
Frame = +2
Query: 128 VAIRMPPVIPINH-----YLGVLKTN 190
+A+ PPV+P NH YL V++ N
Sbjct: 353 LAVPAPPVLPENHLKNAKYLDVIERN 378
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -2
Query: 105 RRKTNISESICQRCFHQ 55
RR+ N++E++C F Q
Sbjct: 966 RRRLNVNETVCSDYFSQ 982
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.7
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = +2
Query: 401 SPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 499
S + S ++ NY +N NN+ ++ NY
Sbjct: 76 SKEPKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.7
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = +2
Query: 401 SPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 499
S + S ++ NY +N NN+ ++ NY
Sbjct: 76 SKEPKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.7
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = +2
Query: 401 SPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 499
S + S ++ NY +N NN+ ++ NY
Sbjct: 76 SKEPKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.7
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = +2
Query: 401 SPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 499
S + S ++ NY +N NN+ ++ NY
Sbjct: 76 SKEPKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.7
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = +2
Query: 401 SPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 499
S + S ++ NY +N NN+ ++ NY
Sbjct: 76 SKEPKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.8 bits (44), Expect = 5.7
Identities = 7/29 (24%), Positives = 16/29 (55%)
Frame = -1
Query: 631 LPAREGSDEKYRYGTLTRPGNRNKYTLNI 545
+P + + ++YG ++ RN Y L++
Sbjct: 652 IPEPQDIENIFKYGYVSHANQRNMYKLDL 680
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 21.0 bits (42), Expect = 9.9
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 146 PVIPINHYLGVLKTNKIEPRSYSIIPCTKYSSSIFSPL 259
P +N KT I R++ ++ YS+S F+P+
Sbjct: 287 PFFCVNIVTSYCKTC-ISGRAFQVLTWLGYSNSAFNPI 323
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,871
Number of Sequences: 438
Number of extensions: 3964
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -