Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30052X
         (386 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   9.8  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    20   9.8  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    20   9.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +1

Query: 304  SLNVNSMPNKRFWRPTRW 357
            S N  S  N   W+PT W
Sbjct: 1357 SWNPGSTTNYPEWQPTEW 1374


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 2   FFFFNVIQYTLL*IYCIFTSKI 67
           F FF +    LL +YCI    +
Sbjct: 243 FLFFIIPLIILLILYCIIAKNL 264


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
          peptide receptor 1 protein.
          Length = 374

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 2  FFFFNVIQYTLL 37
          F+FF   Q+TLL
Sbjct: 20 FYFFETEQFTLL 31


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 91  NSSFEREKN 117
           N SFER+KN
Sbjct: 265 NKSFERDKN 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,392
Number of Sequences: 336
Number of extensions: 1068
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8119573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)