Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30052X
         (386 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35604-6|CAA84681.1|  305|Caenorhabditis elegans Hypothetical pr...    28   2.6  
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr...    27   3.5  
Z82057-5|CAB04861.3|  325|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z81540-5|CAB04405.2|  946|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z81142-11|CAB03512.3|  325|Caenorhabditis elegans Hypothetical p...    27   6.1  

>Z35604-6|CAA84681.1|  305|Caenorhabditis elegans Hypothetical
           protein ZK1058.6 protein.
          Length = 305

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +3

Query: 108 GEESRLTASLAERGEILAVVDLRRRHVVTLY 200
           GEES+L  SLA +  I  V+ +  R   TLY
Sbjct: 81  GEESKLIESLAAQNNIHIVIGVVEREASTLY 111


>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
           protein K02E2.2 protein.
          Length = 1021

 Score = 27.5 bits (58), Expect = 3.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 122 THCESS*ERGNPCCRRPSAAS 184
           THCE     GN CC  P A++
Sbjct: 253 THCEKERRDGNKCCSGPLAST 273


>Z82057-5|CAB04861.3|  325|Caenorhabditis elegans Hypothetical
           protein ZK1037.11 protein.
          Length = 325

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +1

Query: 13  QCNTIHTLVNILYIYFKNNSTYIIICNSSFEREKNLDSLRV 135
           Q N I  L++IL I F     YII+   + +REKNL +  +
Sbjct: 29  QNNFIRVLLSILIIIFP---LYIIVYRKNRKREKNLPTFPI 66


>Z81540-5|CAB04405.2|  946|Caenorhabditis elegans Hypothetical
           protein F46B3.5 protein.
          Length = 946

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 122 THCESS*ERGNPCCRRPSAAS 184
           THCES    GN CC    AA+
Sbjct: 269 THCESGKRDGNKCCDARLAAT 289


>Z81142-11|CAB03512.3|  325|Caenorhabditis elegans Hypothetical
           protein ZK1037.11 protein.
          Length = 325

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +1

Query: 13  QCNTIHTLVNILYIYFKNNSTYIIICNSSFEREKNLDSLRV 135
           Q N I  L++IL I F     YII+   + +REKNL +  +
Sbjct: 29  QNNFIRVLLSILIIIFP---LYIIVYRKNRKREKNLPTFPI 66


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,773,382
Number of Sequences: 27780
Number of extensions: 87925
Number of successful extensions: 206
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)