Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30049
         (898 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.61 
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    22   5.7  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   5.7  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   9.9  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   9.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 25.4 bits (53), Expect = 0.61
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = +2

Query: 701 LLNAWVFVQSMPTIVEFSHETASKIFGGKIKYHLLI 808
           ++N W F++ +  ++EF  +  S     + K HL++
Sbjct: 459 VINRWKFIEFIRKVLEFDVKCVSNYTKQQSKIHLIV 494


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 460 TG*RTYRCQYC 492
           TG R YRC++C
Sbjct: 33  TGERPYRCEHC 43


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 460 TG*RTYRCQYC 492
           TG R YRC++C
Sbjct: 186 TGERPYRCEHC 196


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 50  LKHALRYYRHLFASLL 3
           L+  LRY+  +F+SLL
Sbjct: 84  LQQKLRYFEEVFSSLL 99


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 50  LKHALRYYRHLFASLL 3
           L+  LRY+  +F+SLL
Sbjct: 84  LQQKLRYFEEVFSSLL 99


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,580
Number of Sequences: 336
Number of extensions: 3711
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24927353
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)