Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30044X
(564 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 23 1.8
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 23 1.8
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 23 1.8
AY769608-1|AAV40984.1| 195|Tribolium castaneum heat shock prote... 23 2.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 7.3
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 7.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 7.3
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 7.3
EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxyla... 21 9.6
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 21 9.6
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 21 9.6
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 23.0 bits (47), Expect = 1.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 457 YHHVPRYRRQDAEGDHRPR 401
Y H+ RY+ + +GD R R
Sbjct: 159 YQHLHRYKEEALQGDGRMR 177
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 23.0 bits (47), Expect = 1.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 457 YHHVPRYRRQDAEGDHRPR 401
Y H+ RY+ + +GD R R
Sbjct: 159 YQHLHRYKEEALQGDGRMR 177
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 23.0 bits (47), Expect = 1.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 457 YHHVPRYRRQDAEGDHRPR 401
Y H+ RY+ + +GD R R
Sbjct: 159 YQHLHRYKEEALQGDGRMR 177
>AY769608-1|AAV40984.1| 195|Tribolium castaneum heat shock protein
70 protein.
Length = 195
Score = 22.6 bits (46), Expect = 2.4
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 507 DVDIRKDLYANAVMSGGTTMYPGI 436
D D+ KD V+ GG+T P I
Sbjct: 150 DADMTKDQIDEIVLVGGSTRIPKI 173
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 7.3
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -2
Query: 89 FYINLISFLFLLYTRDRCGSQRQM 18
FY N+I LF + C S Q+
Sbjct: 947 FYYNIIPILFFMLVCFTCKSNIQL 970
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 7.3
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -2
Query: 89 FYINLISFLFLLYTRDRCGSQRQM 18
FY N+I LF + C S Q+
Sbjct: 947 FYYNIIPILFFMLVCFTCKSNIQL 970
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 7.3
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -2
Query: 89 FYINLISFLFLLYTRDRCGSQRQM 18
FY N+I LF + C S Q+
Sbjct: 947 FYYNIIPILFFMLVCFTCKSNIQL 970
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 7.3
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -2
Query: 89 FYINLISFLFLLYTRDRCGSQRQM 18
FY N+I LF + C S Q+
Sbjct: 947 FYYNIIPILFFMLVCFTCKSNIQL 970
>EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxylase
protein.
Length = 475
Score = 20.6 bits (41), Expect = 9.6
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = +2
Query: 194 AQHHTAPGSRGRAA*KHLRWTMPGPDSSYSSFEIHICWKVDREARMDP 337
AQ H++ G +R P ++ + + K DREA + P
Sbjct: 189 AQSHSSVERAGLLGGVKMRGLQPDDNNRLRGETLEVAIKEDREAGLIP 236
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 20.6 bits (41), Expect = 9.6
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 499 VYVALHDGVVHG 534
+Y A+H GVV G
Sbjct: 315 IYDAIHSGVVRG 326
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 20.6 bits (41), Expect = 9.6
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 445 PRYRRQDAEGDHRPRALDHQDQDHRSPR 362
PRY R A+G PR + D R R
Sbjct: 69 PRYGRAAAQGMPYPRFPPYDRMDIRDRR 96
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,921
Number of Sequences: 336
Number of extensions: 2270
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -