Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30044X
(564 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 210 8e-55
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 208 2e-54
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 206 1e-53
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 205 2e-53
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 205 2e-53
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 202 2e-52
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 201 3e-52
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 199 1e-51
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 189 2e-48
12_02_1282 + 27528159-27529148,27529549-27529614 128 2e-30
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 89 2e-18
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 84 6e-17
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 83 1e-16
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 66 2e-11
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 64 6e-11
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 64 6e-11
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 60 2e-09
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 54 8e-08
11_03_0057 + 9375083-9375088,9375904-9376031,9376107-9376166,937... 31 0.63
08_02_0701 + 20177860-20178603 29 1.9
02_05_0733 + 31309835-31310434,31314138-31314254,31314364-313148... 29 1.9
03_02_0877 - 12072996-12073285,12074312-12074615,12074699-120748... 29 3.4
05_01_0311 + 2452230-2452232,2452401-2452809,2454136-2454263,245... 28 4.5
12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232 28 5.9
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 210 bits (512), Expect = 8e-55
Identities = 94/109 (86%), Positives = 102/109 (93%)
Frame = -1
Query: 564 LGMESCGIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPSTIK 385
+GMES GIHET NSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++K
Sbjct: 269 IGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMSKEITALAPSSMK 328
Query: 384 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 238
IK++APPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 329 IKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHRKCF 377
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 208 bits (508), Expect = 2e-54
Identities = 93/109 (85%), Positives = 102/109 (93%)
Frame = -1
Query: 564 LGMESCGIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPSTIK 385
+GME+ GIHET NSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++K
Sbjct: 269 IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMK 328
Query: 384 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 238
IK++APPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 329 IKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHRKCF 377
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 206 bits (502), Expect = 1e-53
Identities = 92/109 (84%), Positives = 101/109 (92%)
Frame = -1
Query: 564 LGMESCGIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPSTIK 385
+GME+ GIHET NSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++K
Sbjct: 269 IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMK 328
Query: 384 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 238
IK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 329 IKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 205 bits (501), Expect = 2e-53
Identities = 92/109 (84%), Positives = 101/109 (92%)
Frame = -1
Query: 564 LGMESCGIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPSTIK 385
+GME+ GIHET NSIMKCDVDIRKDLY N V+SGG+TM+PGIADRM KEITALAPS++K
Sbjct: 272 VGMEAAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADRMSKEITALAPSSMK 331
Query: 384 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 238
IK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct: 332 IKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPAIVHRKCF 380
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 205 bits (501), Expect = 2e-53
Identities = 93/109 (85%), Positives = 101/109 (92%)
Frame = -1
Query: 564 LGMESCGIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPSTIK 385
+GME+ GIHET NSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++K
Sbjct: 266 IGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMK 325
Query: 384 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 238
IK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct: 326 IKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 374
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 202 bits (492), Expect = 2e-52
Identities = 91/109 (83%), Positives = 100/109 (91%)
Frame = -1
Query: 564 LGMESCGIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPSTIK 385
+GMES GIHE NSIMKCDVDIRKDLY N V+SGG+TM+PGIADRM KEIT+LAPS++K
Sbjct: 268 VGMESPGIHEATYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADRMSKEITSLAPSSMK 327
Query: 384 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 238
+K+IAPPERKYSVWIGGSILASLSTFQQMWISK EYDESGPGIVH KCF
Sbjct: 328 VKVIAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPGIVHMKCF 376
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 201 bits (491), Expect = 3e-52
Identities = 90/109 (82%), Positives = 101/109 (92%)
Frame = -1
Query: 564 LGMESCGIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPSTIK 385
+GME+ GIHET NSIMKCDVDIRKDLY N V+SGG+TM+PGIADRM KEITALAPS++K
Sbjct: 269 IGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMK 328
Query: 384 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 238
IK++APPERKYSVWIGGSILASLSTFQQMWIS+ EY+ESGP IVHRKCF
Sbjct: 329 IKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEESGPAIVHRKCF 377
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 199 bits (486), Expect = 1e-51
Identities = 89/109 (81%), Positives = 98/109 (89%)
Frame = -1
Query: 564 LGMESCGIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPSTIK 385
+GME+ GIHE NSIMKCDVDIRKDLY N V+SGG+TM+PGI DRM KEITALAP ++K
Sbjct: 268 IGMEAPGIHEATYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIGDRMSKEITALAPGSMK 327
Query: 384 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 238
IK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPGIVH KCF
Sbjct: 328 IKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPGIVHMKCF 376
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 189 bits (460), Expect = 2e-48
Identities = 92/123 (74%), Positives = 101/123 (82%), Gaps = 14/123 (11%)
Frame = -1
Query: 564 LGMESCGIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPSTIK 385
+GME+ GIHET NSIMKCDVDIRKDLY N V+SGG+TM+PGIADRM KEITALAPS++K
Sbjct: 269 IGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMK 328
Query: 384 IKIIAPPERKYSVWIGGSILASLSTFQ--------------QMWISKEEYDESGPGIVHR 247
IK++APPERKYSVWIGGSILASLSTFQ QMWISK EYDESGP IVHR
Sbjct: 329 IKVVAPPERKYSVWIGGSILASLSTFQQVNLTPTLYEVARMQMWISKGEYDESGPAIVHR 388
Query: 246 KCF 238
KCF
Sbjct: 389 KCF 391
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 128 bits (310), Expect = 2e-30
Identities = 68/109 (62%), Positives = 75/109 (68%)
Frame = -1
Query: 564 LGMESCGIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPSTIK 385
+GME+ GIHET NSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++K
Sbjct: 269 VGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMK 328
Query: 384 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 238
IK MWI+K EYDESGP IVHRKCF
Sbjct: 329 IK--------------------------MWIAKAEYDESGPSIVHRKCF 351
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 89.4 bits (212), Expect = 2e-18
Identities = 40/92 (43%), Positives = 65/92 (70%), Gaps = 3/92 (3%)
Frame = -1
Query: 546 GIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAP 367
G+ V +S+ +CDVDIRK+L ++ ++SGG++ + +R++KE+ + ++K++A
Sbjct: 378 GLPRMVIDSVNRCDVDIRKELLSSILLSGGSSSILQLKERLEKEVLEESSGNTRVKVLAS 437
Query: 366 P---ERKYSVWIGGSILASLSTFQQMWISKEE 280
ER++SVWIGGSILASL +FQQMW SK +
Sbjct: 438 GNSVERRFSVWIGGSILASLGSFQQMWFSKAD 469
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 84.2 bits (199), Expect = 6e-17
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 6/115 (5%)
Frame = -1
Query: 564 LGMESCGIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPSTIK 385
LG+E GI + S+ + + L N ++ GGT G DR Q+E L+ S I
Sbjct: 285 LGLEDYGIVHQLVTSVSNVTPEYHRQLLENTMLCGGTASMTGFEDRFQREAN-LSASAIC 343
Query: 384 IKIIAPPE------RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 238
++ PPE +YS W+GG+ILA + Q ++K +YDE+GP IVH+KCF
Sbjct: 344 PSLVKPPEYMPENLARYSAWLGGAILAKVVFPQNQHVTKGDYDETGPSIVHKKCF 398
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 83.0 bits (196), Expect = 1e-16
Identities = 37/109 (33%), Positives = 61/109 (55%)
Frame = -1
Query: 564 LGMESCGIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPSTIK 385
LGM G+ E + +I C ++ L+ +++GG+T++P +R++KE+ L P +
Sbjct: 320 LGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTERLEKELRPLVPDDYQ 379
Query: 384 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 238
+KIIA + W GGS+LA F+ M I+K EY+E G R+ F
Sbjct: 380 VKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRRRFF 428
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 66.1 bits (154), Expect = 2e-11
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 14/113 (12%)
Frame = -1
Query: 552 SCGIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAP-------- 397
S + E + + + +D R+DLY N V+SGG+TM+ R+Q +I +
Sbjct: 317 STPLPELIDSCVQSAPIDTRRDLYKNIVLSGGSTMFKDFHKRLQNDIKKIVDERVAATNA 376
Query: 396 ------STIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 256
+++ ++A P + Y+ W GGS+ AS F + +KEEY+E G I
Sbjct: 377 RHHVEVKPVEVNVVAHPIQSYAAWFGGSVAASNPEFYESCHTKEEYEEHGASI 429
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 64.5 bits (150), Expect = 6e-11
Identities = 35/114 (30%), Positives = 66/114 (57%), Gaps = 10/114 (8%)
Frame = -1
Query: 561 GMESCGIHETVXNSIMKC---DVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPST 391
G+ + G+H+ V + C +V + Y V+SGG++ PG+++R++KE+ L P+
Sbjct: 369 GVRAMGLHKAVSLCMDHCYNSEVFGDDNWYKTVVLSGGSSCLPGLSERLEKELRELLPAH 428
Query: 390 IK--IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKEEYDE----SGPGIVH 250
I I++I PP S W G +++++STF + W I K+++ + +GP V+
Sbjct: 429 ISEGIRVIPPPFGTDSAWFGAKMISNVSTFTEAWCIKKKQFRQKTRRNGPSFVN 482
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 64.5 bits (150), Expect = 6e-11
Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 16/112 (14%)
Frame = -1
Query: 543 IHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPST--------- 391
+H + I +D R+ LY N V+SGG+TM+ R+Q+++ + +
Sbjct: 351 LHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASNARLG 410
Query: 390 -------IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 256
I++ +++ P ++Y+VW GGS+LAS + F + +K EY+E G I
Sbjct: 411 GDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASI 462
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 11/94 (11%)
Frame = -1
Query: 564 LGMESCGIHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEI------TAL 403
+ +E G+ + I + D+D R LY + V+SGG+TMYPG+ R++KE+ L
Sbjct: 297 IDVEGDGMADMAFRCIQEMDIDNRMTLYQHIVLSGGSTMYPGLPSRLEKEMLDRYLDVVL 356
Query: 402 APS-----TIKIKIIAPPERKYSVWIGGSILASL 316
+ ++++I PP RK+ V++GG++LA +
Sbjct: 357 KGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGI 390
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 54.0 bits (124), Expect = 8e-08
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Frame = -1
Query: 564 LGMESCGIHETVXNSIMKC--DVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPST 391
+G++ GI E V S+ + D +++ L + +++GG ++ PG+ R++ I P
Sbjct: 594 IGIDQAGIDEMVSISLRRLMEDEAVKERLCQSILVTGGCSLIPGMIPRLESGIRQFRPYL 653
Query: 390 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRK 244
+K++ + W G + A+ S F + S +Y E G + HRK
Sbjct: 654 SPLKLVRAADPLIDAWRGAAAFAASSKFGRHTFSLADYREHGENLFHRK 702
>11_03_0057 +
9375083-9375088,9375904-9376031,9376107-9376166,
9376832-9376892,9377434-9377583,9377667-9377822,
9377905-9378116,9378572-9378673,9378785-9378924,
9379781-9379932
Length = 388
Score = 31.1 bits (67), Expect = 0.63
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = -1
Query: 543 IHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 364
I E + I++ ++ ++ Y S G MYP D +K+ L K APP
Sbjct: 226 IRELIYRDILEYHPNMLRE-YLEGTESAGF-MYPSAVDHFKKQFAYLEEHYAKGSTAAPP 283
Query: 363 ERKYSVWIGGSILAS 319
ER+++ S+L S
Sbjct: 284 ERQHNSLPRPSVLYS 298
>08_02_0701 + 20177860-20178603
Length = 247
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -3
Query: 430 QDAEGDHRPRALDHQDQDHRSPREEVLRMDR--WIHPGFPVHLPAD 299
QD E D D+ D+DHRSP+ + R DR + G P H+ D
Sbjct: 200 QDKEDDDDQGGGDYPDEDHRSPKRK-RRYDRGPCYNCGEPGHIARD 244
>02_05_0733 +
31309835-31310434,31314138-31314254,31314364-31314806,
31316831-31317137
Length = 488
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -3
Query: 481 RQRRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPR 362
R RHV HH+ + DH R L + ++ R PR
Sbjct: 282 RLPRHVEEMHHLRHVEERRLPYDHEERRLPYDHEERRRPR 321
>03_02_0877 -
12072996-12073285,12074312-12074615,12074699-12074871,
12075299-12075434,12076327-12076788,12076882-12077189,
12077724-12078105
Length = 684
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Frame = -3
Query: 508 RRRHP*GPVRQ--RRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSP 365
R RHP G R RR HH P Y + GD + DH D P
Sbjct: 604 RHRHPRGKDRGSGRRRGIGLHHAPPYPDDNETGDEQGGQDDHGGGDDHCP 653
>05_01_0311 +
2452230-2452232,2452401-2452809,2454136-2454263,
2455287-2455436,2455526-2455681,2455775-2455986,
2456306-2456407,2456517-2456653,2456769-2457055
Length = 527
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = -1
Query: 543 IHETVXNSIMKCDVDIRKDLYANAVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 364
I E + I++ + ++ +G MYP D +K+ L K APP
Sbjct: 321 IRELIYREILEYHPKMLREFLEGTESTG--FMYPSAVDHFKKQFAYLEEHYAKGSTAAPP 378
Query: 363 ERKYS 349
ER+++
Sbjct: 379 ERQHN 383
>12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232
Length = 1035
Score = 27.9 bits (59), Expect = 5.9
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Frame = -3
Query: 517 HEVRRRHP*GPVRQRRHVRWYH--HVP---RYRRQDAEGDHRPRALDHQDQDHRSPR 362
H +RR P R RR + YH P R R +D RPR D+D PR
Sbjct: 126 HRIRRTP--SPYRDRRRIPDYHPRRTPSPHRDRDRDRHAAGRPRGRGDDDRDRDPPR 180
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,844,681
Number of Sequences: 37544
Number of extensions: 290032
Number of successful extensions: 859
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1293275844
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -