Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30042
(962 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1 |Sc... 137 2e-33
SPBC839.06 |cta3||P-type ATPase, calcium transporting Cta3|Schiz... 106 5e-24
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 86 8e-18
SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyc... 73 5e-14
SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pm... 66 7e-12
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 32 0.10
SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr 3||... 31 0.18
SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 30 0.56
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 27 3.0
SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity fac... 27 3.9
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 27 5.2
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 27 5.2
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 27 5.2
SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual 26 6.9
SPAC11E3.07 |vma4||V-type ATPase subunit E|Schizosaccharomyces p... 26 6.9
SPAC6C3.06c |||P-type ATPase, calcium transporting|Schizosacchar... 26 9.1
SPCC285.17 |spp27|uaf30|RNA polymerase I upstream activation fac... 26 9.1
>SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 899
Score = 137 bits (332), Expect = 2e-33
Identities = 98/285 (34%), Positives = 156/285 (54%), Gaps = 2/285 (0%)
Frame = +2
Query: 113 SVEEVLKYFGTDPDKGLSP-DQIKRNQEKYGPNELPTEEGKSIWQLVLEQF-DDLLVKXX 286
SVE+ TD GLS +I R + +G N+L E+ +++ L+QF D L+
Sbjct: 9 SVEQTCADLETDMYNGLSSLQEITRRNKVHGDNDLKVEDEENMVVQFLKQFVKDPLILLL 68
Query: 287 XXXXXXSFVLALFEEHEDAFSAFVEPFVILLILIANAVVGVWQERNAESAIEALKEYEPE 466
S L + DA S I L ++ VG QE +E +++AL P
Sbjct: 69 FASSAISVTLGNID---DAIS-------IALAIVIVVTVGFVQEYRSEQSLKALNNLVPH 118
Query: 467 MGKVIRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESV 646
VIR K+ + I A ++VPGD+V + +GD++PAD+R+++ +T + ID+S LTGE+
Sbjct: 119 YCNVIRSGKT--EHIVASKLVPGDLVILQIGDRVPADLRIVE--ATELEIDESNLTGENS 174
Query: 647 SVIKHTDPIPDPRAVNQDKKNILFSGTNVAAGKARGIVIGTGLNTAIGKIRTEMSETEEI 826
K ++ I ++ + + NI F GT V G RGIV+ TG +T G++ M +TE+
Sbjct: 175 PRKKSSEAISSNISLTE-RNNIAFMGTLVRHGHGRGIVVATGSDTEFGRVFLTMQQTEKP 233
Query: 827 KTPLQQKLDEFGEQLSKVISVICVAVWAINIGHFNDPAHGGSWIK 961
KTPLQ +D+ G+QLS +IS+I +AV + +G F G +W++
Sbjct: 234 KTPLQNSMDDLGKQLS-LISLIGIAV-IVLVGFF----QGKNWLE 272
>SPBC839.06 |cta3||P-type ATPase, calcium transporting
Cta3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1037
Score = 106 bits (254), Expect = 5e-24
Identities = 77/275 (28%), Positives = 132/275 (48%), Gaps = 6/275 (2%)
Frame = +2
Query: 116 VEEVLKYFGTDPDKGLSPDQIKRNQEKYGPNELPTEEGKSIWQLVLEQFDDLLVKXXXXX 295
+++V F T GL+ ++ + +YG N L + G S W+++L Q + +
Sbjct: 15 IKDVESEFLTSIPNGLTHEEAQNRLSEYGENRLEADSGVSAWKVLLRQVLNAMCVVLILA 74
Query: 296 XXXSFVLALFEEHEDAFSAFVEPFVILLILIANAVVGVWQERNAESAIEALKEYEPEMGK 475
SF + ++E VI I++ N VG QE AE +++L+ M
Sbjct: 75 AALSF----------GTTDWIEGGVISAIIVLNITVGFIQEYKAEKTMDSLRTLASPMAH 124
Query: 476 VIRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVI 655
V R K+ I + +VPGDVV + GD +PAD+RL++ + D+++LTGES+ VI
Sbjct: 125 VTRSSKTDA--IDSHLLVPGDVVVLKTGDVVPADLRLVE--TVNFETDEALLTGESLPVI 180
Query: 656 K--HTDPIPDPRAVNQDKKNILFSGTNVAAGKARGIVIGTGLNTAIGKIRTEMSETEEIK 829
K H + D+ N+ +S + V G+A+GI TG+ T IG I + + ++
Sbjct: 181 KDAHATFQMNEDVPIGDRINLAYSSSIVTKGRAKGICYATGMQTQIGAIAAGLRQKGKLF 240
Query: 830 TPLQQKLDEFGEQLS----KVISVICVAVWAINIG 922
++ + +L+ KV S V +N+G
Sbjct: 241 QRPEKDEPNYRRKLNKYYLKVTSYYVQRVLGLNVG 275
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 85.8 bits (203), Expect = 8e-18
Identities = 73/262 (27%), Positives = 130/262 (49%), Gaps = 2/262 (0%)
Frame = +2
Query: 119 EEVLKYFGTDPDKGLSPDQIKRNQEKYGPNELPTEEGKSIWQLVLEQFDDLLVKXXXXXX 298
EE+L+ TDP GL+ +++ ++KYG N++ E+ +I ++F V
Sbjct: 163 EELLE---TDPKYGLTESEVEERKKKYGLNQMKEEKTNNI-----KKFLSFFV------G 208
Query: 299 XXSFVLALFEEHEDAFSAFVEPFVILLILIANAVVGVWQERNAESAIEALKEYEPEMGKV 478
FV+ L +V+ VI +L+ NA VG QE A S ++ LK+ V
Sbjct: 209 PIQFVMELAAALAAGLRDWVDFGVICALLLLNATVGFVQEYQAGSIVDELKKTMALKASV 268
Query: 479 IRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIK 658
+R + V++I A EIVPGD++ + G PAD RLI +++DQS +TGES++V K
Sbjct: 269 LRDGR--VKEIEASEIVPGDILHLDEGTICPADGRLI-TKDCFLQVDQSAITGESLAVDK 325
Query: 659 HTDPIPDPRAVNQDKKNILFSGTNVAAGKARGIVIGTGLNTAIGKIRTEMSETEEIKTPL 838
H + + ++S + V G+A +V T +T +G+ + + + +
Sbjct: 326 H-------------QNDTMYSSSTVKRGEAFMVVTATADSTFVGRAASLVGAAGQSQGHF 372
Query: 839 QQKLDEFGEQL--SKVISVICV 898
+ L+ G L +++++C+
Sbjct: 373 TEVLNGIGTILLVLVILTLLCI 394
>SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 919
Score = 73.3 bits (172), Expect = 5e-14
Identities = 64/225 (28%), Positives = 110/225 (48%)
Frame = +2
Query: 119 EEVLKYFGTDPDKGLSPDQIKRNQEKYGPNELPTEEGKSIWQLVLEQFDDLLVKXXXXXX 298
EE+L+ TD + GL+ +++ ++KYG N++ E + ++
Sbjct: 75 EELLQ---TDMNTGLTMSEVEERRKKYGLNQMKEELENPFLKFIM-----------FFVG 120
Query: 299 XXSFVLALFEEHEDAFSAFVEPFVILLILIANAVVGVWQERNAESAIEALKEYEPEMGKV 478
FV+ + +V+ VI +L+ NAVVG QE A S ++ LK+ V
Sbjct: 121 PIQFVMEMAAALAAGLRDWVDFGVICALLMLNAVVGFVQEYQAGSIVDELKKSLALKAVV 180
Query: 479 IRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIK 658
IR + V ++ A E+VPGD++++ G I AD R++ +++DQS +TGES++V K
Sbjct: 181 IR--EGQVHELEANEVVPGDILKLDEGTIICADGRVV-TPDVHLQVDQSAITGESLAVDK 237
Query: 659 HTDPIPDPRAVNQDKKNILFSGTNVAAGKARGIVIGTGLNTAIGK 793
H DP F+ + V G+ +V TG +T +G+
Sbjct: 238 H---YGDP----------TFASSGVKRGEGLMVVTATGDSTFVGR 269
>SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pmc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1292
Score = 66.1 bits (154), Expect = 7e-12
Identities = 72/287 (25%), Positives = 119/287 (41%), Gaps = 18/287 (6%)
Frame = +2
Query: 74 QHSNSTMEDAHTKSVEEVLKYFGTDPDKGLSPDQIKRNQEKYGPNELPTEEGKSIWQLVL 253
Q S+ +D++ K V + + D + + YG N LP + K + +L+L
Sbjct: 171 QMSDILNDDSNPKLVVHLDRIRSQDNNPEAKVSHDSDRVKYYGKNVLPEHDSKGLIRLML 230
Query: 254 EQFDDLLVKXXXXXXXXSFVLALFEEHE-----DAFSAFVEPFV-------ILLILIANA 397
E F D ++ S L L++ D + EP V I+ ++
Sbjct: 231 EAFKDKVLILLSIAAVVSLALGLYQTFGQPPTLDPITGKPEPRVEWVEGVAIMAAIVIVV 290
Query: 398 VVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPAD 577
VG + E + L + D V ++V GDV+ V GD +P D
Sbjct: 291 TVGGVNDWQKELQFKKLNAKVSNFDVQVLRD-GAVHSTSVFDLVVGDVLFVEAGDVVPVD 349
Query: 578 IRLIKIYSTTIRIDQSILTGESVSVIKHTDPIPDPRAVNQD---KKN---ILFSGTNVAA 739
LI+ S + +D+S +TGE+ + IK D + D +KN L SGT +
Sbjct: 350 GVLIE--SNNLVLDESAMTGETDN-IKKVDANTAIERTSPDVEYRKNADPYLISGTTILE 406
Query: 740 GKARGIVIGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKV 880
G + +V G+N+ G+ M TE TPLQ +L + ++K+
Sbjct: 407 GNGKLLVTAVGVNSFNGRTTMAM-RTEGQATPLQLRLSRVADAIAKL 452
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 32.3 bits (70), Expect = 0.10
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = -3
Query: 489 SPLMTLPISGSYSFKASMADSAFLSCHTPTTALAIRISKITK-GSTKAENASSCSSNKAN 313
S + + P+S + S A+ A S LS TTA + + ++ ST A +ASS N
Sbjct: 418 SSVSSTPLSSANSTTATSASSTPLSSVNSTTATSASSTPLSSVNSTTATSASSTPLTSVN 477
Query: 312 TNEIIAANSKILTKRSS 262
+ +A+S LT +S
Sbjct: 478 STTATSASSTPLTSVNS 494
>SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1315
Score = 31.5 bits (68), Expect = 0.18
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 21/121 (17%)
Frame = +2
Query: 509 IRAKEIVPGDVVEVSVGDK--IPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDPIPDP 682
I + ++V GDV E+S + PAD L+ S +++S+LTGES+ V K
Sbjct: 400 ISSTDLVIGDVFEISDPELTIFPADALLL---SGDCIVNESMLTGESIPVSKIPATDQSM 456
Query: 683 RAVNQDKKNI--------LFSGTNV-----------AAGKARGIVIGTGLNTAIGKIRTE 805
+ + KNI LFSGT + G + +V+ TG NT G +
Sbjct: 457 KELFSFSKNIPASLCKHFLFSGTKIIQVRKPFVNEKEEGASLAMVVRTGFNTTKGALVRS 516
Query: 806 M 808
M
Sbjct: 517 M 517
>SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1096
Score = 29.9 bits (64), Expect = 0.56
Identities = 26/96 (27%), Positives = 50/96 (52%)
Frame = +2
Query: 371 ILLILIANAVVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKIRAKEIVPGDVVEV 550
I+ I + + V + + +E+ I ++ P+ VIR Q + A ++V GD++
Sbjct: 226 IVFISSYSIFLSVKESKESENRIHSIIG-APQPVTVIRNQVK--QTVLADDLVIGDLLYF 282
Query: 551 SVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIK 658
S D + I ++S++ +D+S++TGESV K
Sbjct: 283 SNLDLKTCPVDGI-LFSSSCLLDESMVTGESVPARK 317
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 27.5 bits (58), Expect = 3.0
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 437 IEALKEYEPEMGKVIRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPAD 577
I++LK + E+ + +G + G+ EIV GD ++ V + P D
Sbjct: 639 IDSLKHLKEEVTSIKKGRECGILLKNFDEIVTGDKLQTFVEEYKPPD 685
>SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity factor
complex subunit, Fip1 homolog |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 344
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +2
Query: 212 LPTEEGKSIWQLVLEQFDD 268
+PT +GK+I+++ LE FDD
Sbjct: 110 VPTIDGKNIFEIDLESFDD 128
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 518 KEIVPGDVVEVSVGDKIPADIRLI 589
K++ GD V+V D+IPADI +I
Sbjct: 295 KDVRVGDFVKVMDNDEIPADIVII 318
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 26.6 bits (56), Expect = 5.2
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 4/137 (2%)
Frame = +2
Query: 410 WQERNAESAIEALKEYEPEMGKVIRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPADIRLI 589
+ ++N + LKE+ E K +GD G K+++ E+VP + S+ P + L+
Sbjct: 627 FSDQNEMQIRQRLKEFM-EYKK--KGDGPGYWKLKSNEVVPDEAGTRSMVS--PETVCLL 681
Query: 590 KIYSTTIRIDQSILTGESVSVIKHTDPIPDPRAVNQDKKNILFSGTNVAAGKARGIVIGT 769
+ +R + G+++ I + P + N GKA + G
Sbjct: 682 ESMQVGVRQLEDAGYGKTMDEINDDEDEEQPAEQLLAPWITTRNFINATQGKAMLTLFGE 741
Query: 770 GLNTAIGK----IRTEM 808
G T IG+ IRT M
Sbjct: 742 GDPTGIGEGYSFIRTSM 758
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 26.6 bits (56), Expect = 5.2
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = +2
Query: 503 QKIRAKEIVPGDVVEVSVGDKIPADIRLI 589
+++ K ++ GD+V+V + IPAD+ ++
Sbjct: 320 ERVCRKSLLVGDIVKVLADEAIPADLLIL 348
>SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 26.2 bits (55), Expect = 6.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 735 ATLVPEKRMFFLSWFTARGSGMGSVCLMTETD 640
A + PEKR+ F S G + +V L T+TD
Sbjct: 306 AKVTPEKRLLFHSALKLSGPVLDAVLLDTDTD 337
>SPAC11E3.07 |vma4||V-type ATPase subunit E|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 227
Score = 26.2 bits (55), Expect = 6.9
Identities = 21/91 (23%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Frame = +2
Query: 326 EEHEDAFSAFVEPFVILLILIANAVVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQ 505
E+ +DA++ F+ ++ + + VG+ R ++ E +K P+ +V++ +
Sbjct: 106 EQKKDAYTKFMADLIVQAMELLGEPVGIVYSRQRDA--EIVKAAIPKATEVLKSKNGSID 163
Query: 506 -KIRAK------EIVPGDVVEVSVGDKIPAD 577
++ A+ + V G VV V +G KI D
Sbjct: 164 YELDAETDDFLNDSVLGGVVLVGLGGKIRVD 194
>SPAC6C3.06c |||P-type ATPase, calcium
transporting|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1033
Score = 25.8 bits (54), Expect = 9.1
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 515 AKEIVPGDVVEVSVGDKIPADIRLIKI---YSTTIRIDQSILTGES 643
A+ I GDVV ++ +IPAD+ L++ IR DQ L GE+
Sbjct: 184 AQNIQAGDVVYIAKDQRIPADMILLETTVGNEAFIRTDQ--LDGET 227
>SPCC285.17 |spp27|uaf30|RNA polymerase I upstream activation factor
complex subunit Spp27|Schizosaccharomyces pombe|chr
3|||Manual
Length = 233
Score = 25.8 bits (54), Expect = 9.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 149 PDKGLSPDQIKRNQEKYGPNELPTEEGKSI 238
PD L Q K N+E PN+LP +E K +
Sbjct: 195 PDDQLPKPQPK-NEEPAAPNDLPKQEEKEL 223
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,583,326
Number of Sequences: 5004
Number of extensions: 71027
Number of successful extensions: 291
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 278
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 493304942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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