Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30039X
(421 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 104 1e-24
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 104 1e-24
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 104 1e-24
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 101 1e-23
Y17705-1|CAA76825.1| 124|Anopheles gambiae opsin protein. 23 3.4
AY146719-1|AAO12079.1| 159|Anopheles gambiae odorant-binding pr... 23 3.4
AF437885-1|AAL84180.1| 157|Anopheles gambiae odorant binding pr... 23 3.4
AY748840-1|AAV28188.1| 104|Anopheles gambiae cytochrome P450 pr... 23 6.0
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 23 6.0
AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein. 22 7.9
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 104 bits (250), Expect = 1e-24
Identities = 49/57 (85%), Positives = 53/57 (92%)
Frame = -3
Query: 419 ALAPSSTKIKIIAPPDRKHSVRIGGSILASLSTFQQMWISKEESDESGPGIVHRKCF 249
ALAPS+ KIKIIAPP+RK+SV IGGSILASLSTFQQMWISK+E DESGP IVHRKCF
Sbjct: 320 ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 104 bits (250), Expect = 1e-24
Identities = 49/57 (85%), Positives = 53/57 (92%)
Frame = -3
Query: 419 ALAPSSTKIKIIAPPDRKHSVRIGGSILASLSTFQQMWISKEESDESGPGIVHRKCF 249
ALAPS+ KIKIIAPP+RK+SV IGGSILASLSTFQQMWISK+E DESGP IVHRKCF
Sbjct: 320 ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 104 bits (250), Expect = 1e-24
Identities = 49/57 (85%), Positives = 53/57 (92%)
Frame = -3
Query: 419 ALAPSSTKIKIIAPPDRKHSVRIGGSILASLSTFQQMWISKEESDESGPGIVHRKCF 249
ALAPS+ KIKIIAPP+RK+SV IGGSILASLSTFQQMWISK+E DESGP IVHRKCF
Sbjct: 320 ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 101 bits (241), Expect = 1e-23
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = -3
Query: 419 ALAPSSTKIKIIAPPDRKHSVRIGGSILASLSTFQQMWISKEESDESGPGIVHRKCF 249
+LAPS+ KIKIIAPP+RK+SV IGGSILASLSTFQ MWISK E DE GPGIVHRKCF
Sbjct: 320 SLAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQTMWISKHEYDEGGPGIVHRKCF 376
>Y17705-1|CAA76825.1| 124|Anopheles gambiae opsin protein.
Length = 124
Score = 23.4 bits (48), Expect = 3.4
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 179 DGCVQNSDEHNTTQHRGHAAAL 244
+GCV++ +EH G+ A+L
Sbjct: 33 EGCVRSREEHARAGQEGNVASL 54
>AY146719-1|AAO12079.1| 159|Anopheles gambiae odorant-binding
protein AgamOBP2 protein.
Length = 159
Score = 23.4 bits (48), Expect = 3.4
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +1
Query: 196 LGRAQHHTAPGSRGRAA*KHLRWTMP-GPDSSDSSFEIHICWK 321
+G+ H A +R T P G D + +F H CWK
Sbjct: 105 MGKLLEHVPTEFEDIALRMGVRCTRPKGKDVCERAFWFHKCWK 147
>AF437885-1|AAL84180.1| 157|Anopheles gambiae odorant binding
protein protein.
Length = 157
Score = 23.4 bits (48), Expect = 3.4
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +1
Query: 196 LGRAQHHTAPGSRGRAA*KHLRWTMP-GPDSSDSSFEIHICWK 321
+G+ H A +R T P G D + +F H CWK
Sbjct: 105 MGKLLEHVPTEFEDIALRMGVRCTRPKGKDVCERAFWFHKCWK 147
>AY748840-1|AAV28188.1| 104|Anopheles gambiae cytochrome P450
protein.
Length = 104
Score = 22.6 bits (46), Expect = 6.0
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2
Query: 369 EALRTDRWIHPGFPVHLPADVDLEG 295
EALR D + G P AD +L G
Sbjct: 15 EALRIDTLVPSGIPHVATADTELAG 39
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 22.6 bits (46), Expect = 6.0
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = -1
Query: 247 KQRGRVTPVLCGVVLVRVLNATVSTLYLVIPEN*TSNLTPSILM*FIVKFYINLI 83
+ R R + C VV + V NA S +L I TP L I ++ N +
Sbjct: 533 RSRNRYSGRYCAVVTLDVTNAFNSASWLAIANALQRINTPKYLYDIIGDYFRNRV 587
>AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein.
Length = 187
Score = 22.2 bits (45), Expect = 7.9
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = +3
Query: 159 ITRYNVLTVAFRTRTSTTPHSTGVTRPRCLEALAVDDAG 275
+TR T T+TT T T P C L + G
Sbjct: 114 VTRTKATVAPKSTTTTTTVKPTTTTPPPCPPTLTTFNGG 152
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 402,121
Number of Sequences: 2352
Number of extensions: 7205
Number of successful extensions: 23
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34632603
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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