Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30038X
(431 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0480 + 17632176-17632814,17633838-17633906 32 0.23
02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665 31 0.30
04_04_0596 - 26497863-26497913,26498010-26498081,26499015-264990... 31 0.53
12_02_0410 + 18701258-18701327,18701398-18701630,18701782-187026... 29 1.6
07_01_0020 - 127855-129156,129240-129365,129811-129865,130047-13... 29 1.6
09_04_0161 - 15232074-15232139,15232299-15232406,15233417-152335... 28 3.7
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 27 4.9
11_01_0127 + 1031690-1031952,1032850-1032857,1034679-1034927,103... 27 6.5
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 27 6.5
02_01_0526 - 3830705-3830932,3831684-3831748,3831958-3832104,383... 27 6.5
01_01_0538 - 3938389-3939727,3939828-3940203,3940299-3940516,394... 27 6.5
10_06_0110 + 10889414-10889669,10889756-10889806,10890595-108911... 27 8.6
06_03_0546 + 21988896-21989009,21989039-21989422,21989475-21989699 27 8.6
06_01_0929 - 7171395-7171676,7172019-7172219,7172438-7172524,717... 27 8.6
04_04_1250 + 32077590-32078000,32078132-32078308,32078437-320785... 27 8.6
02_04_0103 - 19768288-19768737 27 8.6
>08_02_0480 + 17632176-17632814,17633838-17633906
Length = 235
Score = 31.9 bits (69), Expect = 0.23
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +1
Query: 256 WMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
WM R T G G RR S+ AL+ +A + +EE +KKGRR++GE
Sbjct: 175 WMRWLRAPVTEGVAGGGRRN-SAEALETEAEAATAAEGQEE-----EKKGRRKEGE 224
>02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665
Length = 727
Score = 31.5 bits (68), Expect = 0.30
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 274 NTSTNGANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
N T N P + MSSN+ K+S A S+ E E + K +GE
Sbjct: 122 NAVTAAENGTPVKAMSSNSSKKSSKKAAKSQLESESSVGPNGKASTEEGE 171
>04_04_0596 -
26497863-26497913,26498010-26498081,26499015-26499093,
26499440-26499553,26499822-26499871,26500353-26500398,
26501100-26501719
Length = 343
Score = 30.7 bits (66), Expect = 0.53
Identities = 23/78 (29%), Positives = 35/78 (44%)
Frame = +1
Query: 190 DRRSRVREIQNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFSRA 369
+RR R R +++SS + + S + S A S +R R R R
Sbjct: 87 ERRHRRRRSRSASSGSSSESESESES--SYSDCSAGSESETDSEEERRRRRRRRRRKERE 144
Query: 370 EEEKRLAQKKKGRRRKGE 423
EEE+R +K K RR++ E
Sbjct: 145 EEERRRRRKDKERRKRKE 162
>12_02_0410 +
18701258-18701327,18701398-18701630,18701782-18702639,
18703006-18703865,18704285-18704395,18704486-18704567,
18704643-18704735,18704795-18704989
Length = 833
Score = 29.1 bits (62), Expect = 1.6
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +1
Query: 205 VREIQNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAEEEKR 384
VR++ N S V+TR +S T+G N+ P + S S R R E
Sbjct: 21 VRKVLNCSIVRTRIEDVGQDSSGRHRTDGTNNPPHEEAAGKVPASSEESWRTPRDPFELE 80
Query: 385 LAQ 393
LAQ
Sbjct: 81 LAQ 83
>07_01_0020 -
127855-129156,129240-129365,129811-129865,130047-130177
Length = 537
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +1
Query: 289 GANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKK 399
G++S R R NAL+++R A EEEKRL +K
Sbjct: 139 GSSSSRRMRSLENALEKAR--AEIVEMEEEKRLMSRK 173
>09_04_0161 -
15232074-15232139,15232299-15232406,15233417-15233506,
15233617-15233733,15234408-15234527,15234930-15236168
Length = 579
Score = 27.9 bits (59), Expect = 3.7
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 190 DRRSRVREIQNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFS 363
D SR + ++ S T + R S TS N P+R S++ + S PS+R S
Sbjct: 38 DVASRYKNGLSAHSAATTARRCTSPSPGRTSANECTPEPKRAQSADRRRPSTPSSRVS 95
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 27.5 bits (58), Expect = 4.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 310 RRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
R + +R R +RAEEE+R ++++ RRRK E
Sbjct: 228 RAAAEERARREEEEGR-ARAEEERRRREEERRRRRKEE 264
>11_01_0127 +
1031690-1031952,1032850-1032857,1034679-1034927,
1034938-1035009,1036609-1036724,1037482-1037545,
1037742-1037773,1037804-1037850,1038627-1038660,
1039308-1039652,1040425-1040718,1040968-1041232,
1041359-1041480,1041754-1042059
Length = 738
Score = 27.1 bits (57), Expect = 6.5
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +1
Query: 193 RRSRVREIQNSSSVKTRSGRTWMNS*R-NTSTNGANSGPRRRMSSNALKRSRPSARFSRA 369
R++ I+ + R+ R W ++ R G+ G +RM AL R F +
Sbjct: 620 RKATCPSIEGTKRQLVRTDRGWSSAQRARRFATGSVGGVIKRMVITALPAQRTPNNFDKL 679
Query: 370 EEEKRLAQKKKGRRR 414
++ + K+GR R
Sbjct: 680 QKVLNRGKGKRGRPR 694
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +3
Query: 165 KPAPKQESRPSIAGEGDPEFIKRQDQKRSDLDEQLKEYINEWRK 296
K APK+ +P + + E K + + DL K ++EW++
Sbjct: 256 KEAPKEAPKPKVEASEEEEAPKPKPKNPLDLLPPSKMILDEWKR 299
>02_01_0526 -
3830705-3830932,3831684-3831748,3831958-3832104,
3832208-3832256
Length = 162
Score = 27.1 bits (57), Expect = 6.5
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +1
Query: 271 RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAEEEK---RLAQKKKGRRRKGE 423
R +S + R R K SR S+R +AEEE+ R +KKK +G+
Sbjct: 10 RRSSPSSGEEEERERKKRRDKKESRRSSRDEQAEEEEEEERRRRKKKKHGDRGK 63
>01_01_0538 -
3938389-3939727,3939828-3940203,3940299-3940516,
3940607-3940769,3940866-3941100,3941186-3941353
Length = 832
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 304 PRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
PRR M N + R A E + ++++GRRR+
Sbjct: 531 PRRSMEDNTVDTERGRASVREKLEHLAIKERQRGRRRE 568
>10_06_0110 +
10889414-10889669,10889756-10889806,10890595-10891163,
10891178-10891660,10891747-10891944,10893300-10893354,
10893372-10893631
Length = 623
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 334 KRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
K R R EEEK+ +KKK ++R G+
Sbjct: 565 KGGRKQKREEEEEEEKKKKKKKKKKKRSGK 594
>06_03_0546 + 21988896-21989009,21989039-21989422,21989475-21989699
Length = 240
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 325 NALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
NAL + P RF R E++R +KKK + K
Sbjct: 52 NALINNGPRYRFRRPGEKRRRKKKKKHNKSK 82
>06_01_0929 -
7171395-7171676,7172019-7172219,7172438-7172524,
7172973-7173023,7173883-7173987,7174074-7174185,
7174284-7174366,7174434-7174557,7174822-7174973
Length = 398
Score = 26.6 bits (56), Expect = 8.6
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 295 NSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKK 402
N+ P +R SS + +S PS +FS+ EEE ++KK
Sbjct: 322 NNSPLKRSSSRSKAKS-PS-KFSKGEEENSQRKEKK 355
>04_04_1250 +
32077590-32078000,32078132-32078308,32078437-32078561,
32078629-32078761,32078866-32079015,32079105-32079158,
32079437-32079532,32080021-32080095,32080723-32080824,
32080903-32081589,32081686-32081817,32081916-32082023,
32082170-32082319
Length = 799
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +1
Query: 271 RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGECA 429
+ T G ++ ++ L SR A+ +R+ +EK+ QK+ G++ +G A
Sbjct: 747 KQKKTGGLSNRQKQHKKKMPLAASR--AKAARSRQEKKKLQKRSGKQFRGRKA 797
>02_04_0103 - 19768288-19768737
Length = 149
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 301 GPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
GP R KR R + + +++K+ +KKK +++K
Sbjct: 98 GPMREKRRRKRKRKRKKKKKKKKKKKKKKKKKKKKKKKK 136
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,959,646
Number of Sequences: 37544
Number of extensions: 148516
Number of successful extensions: 621
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 814473264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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