Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30038X
(431 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 31 0.36
U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical pr... 30 0.62
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 30 0.82
Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical pr... 30 0.82
Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z77657-1|CAB01144.1| 130|Caenorhabditis elegans Hypothetical pr... 28 2.5
U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical pr... 28 3.3
U70851-7|AAB09130.3| 640|Caenorhabditis elegans Hypothetical pr... 28 3.3
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 28 3.3
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 28 3.3
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z79695-7|CAO79774.1| 291|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z79695-6|CAB01968.3| 293|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z69634-6|CAD01081.2| 490|Caenorhabditis elegans Hypothetical pr... 27 4.4
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 27 4.4
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 27 4.4
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 27 4.4
Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z48583-5|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical pr... 27 5.8
AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical ... 27 5.8
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 27 7.7
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 27 7.7
AL032652-5|CAB63399.1| 579|Caenorhabditis elegans Hypothetical ... 27 7.7
AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical ... 27 7.7
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 31.1 bits (67), Expect = 0.36
Identities = 21/74 (28%), Positives = 36/74 (48%)
Frame = +1
Query: 190 DRRSRVREIQNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFSRA 369
+ + R R +SSS + S + +S + S++ ++SG R R S + +RP AR R+
Sbjct: 6 ETKKRARSSSSSSSSSSGSSSSGSSSSGSRSSSSSSSG-RSRSRSPRRRDTRPPARGGRS 64
Query: 370 EEEKRLAQKKKGRR 411
R +G R
Sbjct: 65 RSPIRRGSPPRGAR 78
>U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical
protein C10G11.9 protein.
Length = 203
Score = 30.3 bits (65), Expect = 0.62
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = +1
Query: 196 RSRVREIQNSSS-VKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAE 372
RSR + S S +TRSG + R+ S + RRR SS A R +A+ + A+
Sbjct: 125 RSRSSKRSRSRSRPRTRSGSRSSSRSRSGSRRSSRRRSRRRSSSKARGRRASTAKKTPAK 184
Query: 373 EEKRLAQKKKGRR---RKG 420
R ++K +R RKG
Sbjct: 185 RRSRSRSQQKVKRSMSRKG 203
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 29.9 bits (64), Expect = 0.82
Identities = 22/62 (35%), Positives = 27/62 (43%)
Frame = +1
Query: 196 RSRVREIQNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAEE 375
RSR R + S S +R+GR S + + S R R SN RSR S R A
Sbjct: 185 RSRSRSVSRSKSPASRNGR--------VSRHRSRSQNRSRSRSNTRSRSRSSGRSGSAHS 236
Query: 376 EK 381
K
Sbjct: 237 RK 238
>Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical
protein Y57G11C.9a protein.
Length = 553
Score = 29.9 bits (64), Expect = 0.82
Identities = 22/62 (35%), Positives = 27/62 (43%)
Frame = +1
Query: 196 RSRVREIQNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAEE 375
RSR R + S S +R+GR S + + S R R SN RSR S R A
Sbjct: 185 RSRSRSVSRSKSPASRNGR--------VSRHRSRSQNRSRSRSNTRSRSRSSGRSGSAHS 236
Query: 376 EK 381
K
Sbjct: 237 RK 238
>Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical
protein C04G2.8 protein.
Length = 197
Score = 29.5 bits (63), Expect = 1.1
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +1
Query: 196 RSRVREIQNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAEE 375
RS R + S+S + S R+ T + S R R S + RSR S +SR+
Sbjct: 88 RSSRRSVVRSASRGSVSRRSSSRGSVYGRTGRSRSSKRSRSRSRSRSRSR-SRSYSRSRS 146
Query: 376 EKRLAQKKKGRRR 414
R + +++ RRR
Sbjct: 147 GSRRSSRRRSRRR 159
>Z77657-1|CAB01144.1| 130|Caenorhabditis elegans Hypothetical
protein F08H9.2 protein.
Length = 130
Score = 28.3 bits (60), Expect = 2.5
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +1
Query: 226 SSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQK 396
S ++RS + R+TS+ + S RR+S KR RP++ ++ EEK A+K
Sbjct: 67 SRSRSRSRSRSRSKSRSTSSRRSRSRSARRVS---FKRGRPASFAMKSPEEKTAAKK 120
>U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical
protein T27A3.4 protein.
Length = 203
Score = 27.9 bits (59), Expect = 3.3
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +1
Query: 271 RNTSTNGANSGP--RRRMSSNALKRSRPSARF-SRAEEEKRLAQKKKGRRR 414
R +S+ G+ G R R S + RSRP R SR+ R ++ RRR
Sbjct: 111 RRSSSRGSVYGRTGRSRSSKRSRSRSRPRTRSGSRSSSRSRSGSRRSSRRR 161
>U70851-7|AAB09130.3| 640|Caenorhabditis elegans Hypothetical
protein M02B7.5 protein.
Length = 640
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 229 SVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNAL 333
S+K +G N+STNG N+ RR+S N+L
Sbjct: 594 SMKLSNGSNSSAGSSNSSTNGVNNSSFRRLSFNSL 628
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 27.9 bits (59), Expect = 3.3
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 307 RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
R+ S RSR AR SR+ E KR + RRR+
Sbjct: 1504 RKDPRSKNRSRSRDRARRSRSREHKRARSRSAERRRR 1540
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 27.9 bits (59), Expect = 3.3
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 307 RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
R+ S RSR AR SR+ E KR + RRR+
Sbjct: 129 RKDPRSKNRSRSRDRARRSRSREHKRARSRSAERRRR 165
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 307 RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
RRR + + +R R R EEE+R ++++ RR+K
Sbjct: 1431 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKK 1467
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 292 ANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
A RRR +R R R +EE R ++++ RRR+ E
Sbjct: 1417 AEEAERRRREEEERRRREAEDRKRRQDEEDRRRREEEERRRREE 1460
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 307 RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
RRR + + +R R R EEE+R ++++ RR+K
Sbjct: 1443 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKK 1479
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 292 ANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
A RRR +R R R +EE R ++++ RRR+ E
Sbjct: 1429 AEEAERRRREEEERRRREAEDRKRRQDEEDRRRREEEERRRREE 1472
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 307 RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
RRR + + +R R R EEE+R ++++ RR+K
Sbjct: 1330 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKK 1366
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 292 ANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
A RRR +R R R +EE R ++++ RRR+ E
Sbjct: 1316 AEEAERRRREEEERRRREAEDRKRRQDEEDRRRREEEERRRREE 1359
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 307 RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
RRR + + +R R R EEE+R ++++ RR+K
Sbjct: 1412 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKK 1448
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 292 ANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
A RRR +R R R +EE R ++++ RRR+ E
Sbjct: 1398 AEEAERRRREEEERRRREAEDRKRRQDEEDRRRREEEERRRREE 1441
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 307 RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
RRR + + +R R R EEE+R ++++ RR+K
Sbjct: 1431 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKK 1467
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 292 ANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
A RRR +R R R +EE R ++++ RRR+ E
Sbjct: 1417 AEEAERRRREEEERRRREAEDRKRRQDEEDRRRREEEERRRREE 1460
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 307 RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
RRR + + +R R R EEE+R ++++ RR+K
Sbjct: 1443 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKK 1479
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 292 ANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
A RRR +R R R +EE R ++++ RRR+ E
Sbjct: 1429 AEEAERRRREEEERRRREAEDRKRRQDEEDRRRREEEERRRREE 1472
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 307 RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
RRR + + +R R R EEE+R ++++ RR+K
Sbjct: 1330 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKK 1366
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 292 ANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
A RRR +R R R +EE R ++++ RRR+ E
Sbjct: 1316 AEEAERRRREEEERRRREAEDRKRRQDEEDRRRREEEERRRREE 1359
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 307 RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
RRR + + +R R R EEE+R ++++ RR+K
Sbjct: 1412 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKK 1448
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 292 ANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
A RRR +R R R +EE R ++++ RRR+ E
Sbjct: 1398 AEEAERRRREEEERRRREAEDRKRRQDEEDRRRREEEERRRREE 1441
>Z79695-7|CAO79774.1| 291|Caenorhabditis elegans Hypothetical
protein F27D4.2b protein.
Length = 291
Score = 27.5 bits (58), Expect = 4.4
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 271 RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAEEE 378
RN ST+GA S R ++++A RP+ + EEE
Sbjct: 224 RNPSTSGAASRTRTPLTTSATNSPRPTTEPTIKEEE 259
>Z79695-6|CAB01968.3| 293|Caenorhabditis elegans Hypothetical
protein F27D4.2a protein.
Length = 293
Score = 27.5 bits (58), Expect = 4.4
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 271 RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAEEE 378
RN ST+GA S R ++++A RP+ + EEE
Sbjct: 226 RNPSTSGAASRTRTPLTTSATNSPRPTTEPTIKEEE 261
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 310 RRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRR 414
RR +S RSR R SR+ + +R + ++ RRR
Sbjct: 430 RRSNSRRRSRSRDRQRRSRSRDRRRYSPDRRERRR 464
>Z69634-6|CAD01081.2| 490|Caenorhabditis elegans Hypothetical
protein B0001.8 protein.
Length = 490
Score = 27.5 bits (58), Expect = 4.4
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 217 QNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPS-ARFSRAEEEKR 384
+ + S + GR+ N NTS N P R + +RPS R SR+ E +R
Sbjct: 227 ERNRSPRYNDGRSNQNDYGNTSQYSRNGSPDRSRRQIPNEHNRPSNLRRSRSAERRR 283
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 307 RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
RRR + + +R R R EEE+R ++++ RR+K
Sbjct: 1443 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKK 1479
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 292 ANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
A RRR +R R R +EE R ++++ RRR+ E
Sbjct: 1429 AEEAERRRREEEERRRREAEDRKRRQDEEDRRRREEEERRRREE 1472
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 307 RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
RRR + + +R R R EEE+R ++++ RR+K
Sbjct: 1443 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKK 1479
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 292 ANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
A RRR +R R R +EE R ++++ RRR+ E
Sbjct: 1429 AEEAERRRREEEERRRREAEDRKRRQDEEDRRRREEEERRRREE 1472
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 307 RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
RRR + + +R R R EEE+R ++++ RR+K
Sbjct: 1443 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKK 1479
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 292 ANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
A RRR +R R R +EE R ++++ RRR+ E
Sbjct: 1429 AEEAERRRREEEERRRREAEDRKRRQDEEDRRRREEEERRRREE 1472
>Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical
protein T01E8.5 protein.
Length = 1270
Score = 27.1 bits (57), Expect = 5.8
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 259 MNS*RNTSTNGANSGPRRRMSSNALKRSRP-SARFSRAEEEKRLAQKKKGRRRK 417
+N ++ S R+R +SN+ SR S R+ R +R ++K RR+K
Sbjct: 123 LNGCQDPPETSQQSTSRKRSASNSRSPSRSHSRRYDRDNGRQRSRSREKKRRKK 176
>Z48583-5|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical
protein T01E8.5 protein.
Length = 1270
Score = 27.1 bits (57), Expect = 5.8
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 259 MNS*RNTSTNGANSGPRRRMSSNALKRSRP-SARFSRAEEEKRLAQKKKGRRRK 417
+N ++ S R+R +SN+ SR S R+ R +R ++K RR+K
Sbjct: 123 LNGCQDPPETSQQSTSRKRSASNSRSPSRSHSRRYDRDNGRQRSRSREKKRRKK 176
>AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical
protein Y63D3A.6b protein.
Length = 752
Score = 27.1 bits (57), Expect = 5.8
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 165 KPAPKQESRPSIAGEGDPEFIKRQDQKRSDLDEQLKEYINE 287
K PKQ+ + + G+G +F+K+ D ++ LKE E
Sbjct: 526 KNKPKQKKKKA-QGQGQKKFVKKNAPASPDTEKALKEEAKE 565
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 26.6 bits (56), Expect = 7.7
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +1
Query: 208 REIQNSSSVKTRS-GRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFS-RAEEEK 381
R+++ + + RS R+ R+ S + S P RR S + + R S S + +K
Sbjct: 177 RKLKCTDETRDRSRSRSPRRRSRSRSPTRSRSPPARRRSPGSDRSDRKSRSASPKKRSDK 236
Query: 382 RLAQKKKGRRRKG 420
R + K R R G
Sbjct: 237 RARSESKSRSRSG 249
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/50 (26%), Positives = 20/50 (40%)
Frame = +1
Query: 274 NTSTNGANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
+T G N + N + + SA E E R ++ RR+ GE
Sbjct: 111 STKQFGTNQNKTSKSDQNKTSKRKSSAHTDEKESENREEWSRRSRRKCGE 160
>AL032652-5|CAB63399.1| 579|Caenorhabditis elegans Hypothetical
protein Y63D3A.6a protein.
Length = 579
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +3
Query: 165 KPAPKQESRPSIAGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQ 299
K PKQ+ + + G+G +F+K+ D ++ LKE R++
Sbjct: 526 KNKPKQKKKKA-QGQGQKKFVKKNAPASPDTEKALKEEAKVLREE 569
>AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical
protein Y106G6D.3 protein.
Length = 555
Score = 26.6 bits (56), Expect = 7.7
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 283 TNGANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
+N NS R+ SN KRS+ S R S ++ +KKK R+ K
Sbjct: 38 SNSRNS--RKSSRSNKSKRSQRSKRRSAQRKKSSSRRKKKLRKEK 80
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,125,742
Number of Sequences: 27780
Number of extensions: 109680
Number of successful extensions: 589
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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