Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30035
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    22   3.6  
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    21   6.3  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   6.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   8.4  

>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 284 EGASPSKKSDHLPSRTSAMRDFTSRYRP 367
           +GASP      +P RT++     S Y P
Sbjct: 191 QGASPLPLLVPIPQRTASTASSASNYSP 218


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +1

Query: 229 FRGRIRFESSS*AVLRPLGGCESF*EIRPSAISD 330
           +R RIR++    +++ P+ G  +  +I   AIS+
Sbjct: 44  YRSRIRYQGRISSLILPIYGLSTKPKIMQGAISN 77


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 371 IRIQFSSLGYLSYARIEA 424
           I +  SS+GY  Y RI A
Sbjct: 141 ISVYSSSVGYTQYVRIAA 158


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +1

Query: 385 FLVRIPIVRADRGVFGSKEFSNIVGKFKAVKEVLRYNLV 501
           FL  + I      +FG   F+     F++ K ++ YN++
Sbjct: 10  FLNSLQIYLQHNQIFGFVTFTCTRSNFRSSKLLILYNII 48


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +1

Query: 385 FLVRIPIVRADRGVFGSKEFSNIVGKFKAVKEVLRYNLV 501
           FL  + I      +FG   F+     F++ K ++ YN++
Sbjct: 28  FLNSLQIYLQHNQIFGFVTFTCTRSNFRSSKLLILYNII 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,143
Number of Sequences: 336
Number of extensions: 2485
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)