Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30035
         (623 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    25   2.0  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   4.5  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   7.9  

>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +2

Query: 353 SRYRPHIRIQFSSLGYLSYARIEAFLAQRSSLTSXANL-KR*RKSSATTWFDDLSNV 520
           + Y P   IQF SLG +   R ++F A R    S A++ K       T W   LS +
Sbjct: 343 AEYYPSAEIQFMSLGNIHVIR-KSFHALRQLCASQADIPKWLGLLERTLWLQHLSGL 398


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 353 SRYRPHIRIQFSSLGYLSYARIEAFLAQRSSLTSXANL 466
           + Y P   IQF SLG +   R ++F A R    S A++
Sbjct: 343 AEYYPSAEIQFMSLGNIHVIR-KSFHALRQLCASQADI 379


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 112 RGPVALLFRRHQTSRVGLTTTS-LGLRAEA*LLSYGIVYLFR 234
           R  V  +FRRH+ SRV     S  G ++E  L +YG + L R
Sbjct: 385 RKAVIEMFRRHRKSRVNQEPNSGCGTQSEL-LRAYGNLALRR 425


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,787
Number of Sequences: 2352
Number of extensions: 10834
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)