Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30035
(623 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g59980.1 68416.m06696 tRNA-binding region domain-containing p... 32 0.36
At2g33240.1 68415.m04072 myosin, putative similar to myosin (GI:... 29 1.9
At3g58160.1 68416.m06485 myosin heavy chain, putative similar to... 29 2.5
At4g33200.1 68417.m04727 myosin, putative similar to myosin (GI:... 29 3.3
At4g26600.1 68417.m03834 nucleolar protein, putative similar to ... 29 3.3
At5g43900.1 68418.m05368 myosin heavy chain (MYA2) nearly identi... 28 5.8
At4g28710.1 68417.m04106 myosin heavy chain, putative similar to... 28 5.8
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 28 5.8
At2g20290.1 68415.m02370 myosin, putative similar to myosin (GI:... 28 5.8
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 28 5.8
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 28 5.8
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 28 5.8
At1g04160.1 68414.m00406 myosin family protein contains Pfam pro... 28 5.8
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 27 7.7
At4g02940.1 68417.m00401 oxidoreductase, 2OG-Fe(II) oxygenase fa... 27 7.7
At2g35660.2 68415.m04374 monooxygenase family protein nearly ide... 27 7.7
At2g35660.1 68415.m04373 monooxygenase family protein nearly ide... 27 7.7
At1g54560.1 68414.m06222 myosin, putative similar to myosin GI:4... 27 7.7
At1g17580.1 68414.m02165 myosin, putative similar to myosin GI:4... 27 7.7
>At3g59980.1 68416.m06696 tRNA-binding region domain-containing
protein similar to SP|O54873 Multisynthetase complex
auxiliary component p43 [Contains: Endothelial-monocyte
activating polypeptide II (EMAP-II) (Small inducible
cytokine subfamily E member 1)] {Cricetulus griseus};
contains Pfam profile PF01588: Putative tRNA binding
domain
Length = 273
Score = 31.9 bits (69), Expect = 0.36
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -3
Query: 114 ADPVHVEIVD-SEVERRATCSALPPVTPMDLIKG 16
AD ++VE VD E E R CS L P+DL++G
Sbjct: 125 ADSLYVEEVDIGEAEPRIICSGLVKYVPLDLLQG 158
>At2g33240.1 68415.m04072 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin my5A
(SP:Q02440) {Gallus gallus}
Length = 1770
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +2
Query: 350 TSRYRPHIRIQFSSLGYLSYARIEAFLAQRSSLTSXANLKR 472
+SR+ + IQF+ +G +S A I +L +RS + ++ +R
Sbjct: 228 SSRFGKFVEIQFNHMGRISGAAIRTYLLERSRVCQVSDPER 268
>At3g58160.1 68416.m06485 myosin heavy chain, putative similar to
myosin heavy chain [Arabidopsis thaliana]
gi|602328|emb|CAA84067.
Length = 1242
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 350 TSRYRPHIRIQFSSLGYLSYARIEAFLAQRSSLTSXANLKR 472
+SR+ + IQF +G +S A I +L +RS + ++ +R
Sbjct: 210 SSRFGKFVEIQFDDVGRISGAAIRTYLLERSRVCQVSDPER 250
>At4g33200.1 68417.m04727 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]
Length = 1522
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 344 DFTSRYRPHIRIQFSSLGYLSYARIEAFLAQRSSLTSXANLKR 472
D +SR+ + IQF + G +S A I +L +RS + + +R
Sbjct: 215 DNSSRFGKFVEIQFDTNGRISGAAIRTYLLERSRVVRITDPER 257
>At4g26600.1 68417.m03834 nucleolar protein, putative similar to
SP|P46087 Proliferating-cell nucleolar antigen p120
(Proliferation-associated nucleolar protein p120) {Homo
sapiens}; contains Pfam profile PF01189: NOL1/NOP2/sun
family
Length = 671
Score = 28.7 bits (61), Expect = 3.3
Identities = 23/67 (34%), Positives = 31/67 (46%)
Frame = -1
Query: 476 FTALNLPTMLENSFEPKTPRSARTIGILTRKIEFECVAYNAT*NLASLKSEMADGLIS*K 297
F + L ++E +FE K P S RT + TR+ + + N NL L GLI
Sbjct: 250 FPVVELMELIE-AFEKKRPTSIRTNTLKTRRRDLADILLNRGVNLDPLSKWSKVGLIV-Y 307
Query: 296 DSHPPNG 276
DS P G
Sbjct: 308 DSQVPIG 314
>At5g43900.1 68418.m05368 myosin heavy chain (MYA2) nearly identical
to PIR|S51824 myosin heavy chain MYA2 [Arabidopsis
thaliana]
Length = 1505
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 350 TSRYRPHIRIQFSSLGYLSYARIEAFLAQRSSLTSXANLKR 472
+SR+ + IQF G +S A I +L +RS + ++ +R
Sbjct: 212 SSRFGKFVEIQFDEKGRISGAAIRTYLLERSRVCQVSDPER 252
>At4g28710.1 68417.m04106 myosin heavy chain, putative similar to
myosin [Arabidopsis thaliana] gi|499047|emb|CAA84066.
Length = 899
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 350 TSRYRPHIRIQFSSLGYLSYARIEAFLAQRSSLTSXANLKR 472
+SR+ + IQF G +S A I +L +RS + ++ +R
Sbjct: 211 SSRFGKFVEIQFDQRGRISGAAIRTYLLERSRVCQVSDPER 251
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 350 TSRYRPHIRIQFSSLGYLSYARIEAFLAQRSSLTSXANLKR 472
+SR+ + IQF G +S A I +L +RS + ++ +R
Sbjct: 212 SSRFGKFVEIQFDKRGKISGAAIRTYLLERSRVCQVSDPER 252
>At2g20290.1 68415.m02370 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1493
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 350 TSRYRPHIRIQFSSLGYLSYARIEAFLAQRSSLTSXANLKR 472
+SR+ + IQF G +S A I +L +RS + ++ +R
Sbjct: 222 SSRFGKFVEIQFDQRGRISGAAIRTYLLERSRVCQVSDPER 262
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 252 EFKLSGTKT-VGRVRVLLRNQTICHLGLQ 335
EF G KT VGR RV ++ +T C LGL+
Sbjct: 28 EFNKVGMKTPVGRRRVFVQTETGCVLGLE 56
>At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to
myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis
thaliana]; similar to ESTs gb|R30087 and gb|AA394762
Length = 1538
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 350 TSRYRPHIRIQFSSLGYLSYARIEAFLAQRSSLTSXANLKR 472
+SR+ + IQF G +S A I +L +RS + ++ +R
Sbjct: 220 SSRFGKFVEIQFDKQGRISGAAIRTYLLERSRVCQISDPER 260
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 350 TSRYRPHIRIQFSSLGYLSYARIEAFLAQRSSLTSXANLKR 472
+SR+ + IQF G +S A I +L +RS + ++ +R
Sbjct: 211 SSRFGKFVEIQFDQRGRISGAAIRTYLLERSRVCQVSDPER 251
>At1g04160.1 68414.m00406 myosin family protein contains Pfam
profiles: PF02736 myosin N-terminal SH3-like domain,
PF00063 myosin head (motor domain), PF00612 IQ
calmodulin-binding motif, PF01843: DIL domain
Length = 1500
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 350 TSRYRPHIRIQFSSLGYLSYARIEAFLAQRSSLTSXANLKR 472
+SR+ + IQF G +S A I +L +RS + ++ +R
Sbjct: 213 SSRFGKFVEIQFDQSGRISGAAIRTYLLERSRVCQVSDPER 253
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +2
Query: 350 TSRYRPHIRIQFSSLGYLSYARIEAFLAQRSSLTSXANLKR 472
+SR+ + +QF + G +S A + +L +RS + ++ +R
Sbjct: 226 SSRFGKFVELQFDNCGRISGAAVRTYLLERSRVCQISDPER 266
>At4g02940.1 68417.m00401 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to A. thaliana hypothetical
protein T13L16.2, GenBank accession number 2708738;
contains Pfam domain PF03171 2OG-Fe(II) oxygenase
superfamily
Length = 569
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 244 GYDHGIDKLFRTTVIMPPLV 185
GYDH ID + + V+ PP+V
Sbjct: 474 GYDHSIDMMPKLGVLRPPMV 493
>At2g35660.2 68415.m04374 monooxygenase family protein nearly
identical to CTF2A [GI:4164576][Plant Physiol. 119, 364
(1999), PGR99-008]
Length = 325
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 446 LTSXANLKR*RKSSATTWFDDLSN-VEVMCDVTMSMASAVSR 568
+T A LK+ K +TW +DL N +++ D T+S V R
Sbjct: 156 ITDPAILKKQAKELVSTWPEDLQNLIDLTPDETISRTPLVDR 197
>At2g35660.1 68415.m04373 monooxygenase family protein nearly
identical to CTF2A [GI:4164576][Plant Physiol. 119, 364
(1999), PGR99-008]
Length = 439
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 446 LTSXANLKR*RKSSATTWFDDLSN-VEVMCDVTMSMASAVSR 568
+T A LK+ K +TW +DL N +++ D T+S V R
Sbjct: 270 ITDPAILKKQAKELVSTWPEDLQNLIDLTPDETISRTPLVDR 311
>At1g54560.1 68414.m06222 myosin, putative similar to myosin
GI:433663 from [Arabidopsis thaliana]
Length = 1529
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 350 TSRYRPHIRIQFSSLGYLSYARIEAFLAQRSSLTSXANLKR 472
+SR+ + IQF G +S A + +L +RS + ++ +R
Sbjct: 215 SSRFGKFVEIQFDKQGRISGAAVRTYLLERSRVCQISDPER 255
>At1g17580.1 68414.m02165 myosin, putative similar to myosin
GI:433663 from (Arabidopsis thaliana)
Length = 1520
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 350 TSRYRPHIRIQFSSLGYLSYARIEAFLAQRSSLTSXANLKR 472
+SR+ + IQF G +S A I +L +RS + ++ +R
Sbjct: 209 SSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPER 249
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,364,137
Number of Sequences: 28952
Number of extensions: 241082
Number of successful extensions: 519
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 519
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1265787216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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