Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30034
(942 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g28770.1 68416.m03591 expressed protein 42 4e-04
At1g03080.1 68414.m00282 kinase interacting family protein simil... 42 8e-04
At5g25870.1 68418.m03069 hypothetical protein 40 0.003
At5g52280.1 68418.m06488 protein transport protein-related low s... 39 0.004
At2g25350.1 68415.m03032 phox (PX) domain-containing protein wea... 36 0.039
At5g46070.1 68418.m05665 guanylate-binding family protein contai... 35 0.090
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 35 0.090
At1g10890.1 68414.m01251 F-box family protein contains Pfam PF00... 35 0.090
At5g54410.1 68418.m06777 hypothetical protein 34 0.12
At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 34 0.12
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 34 0.12
At1g45976.1 68414.m05206 expressed protein 34 0.12
At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit... 34 0.16
At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)... 33 0.21
At3g23930.1 68416.m03006 expressed protein 33 0.27
At3g07780.1 68416.m00949 expressed protein 33 0.27
At1g21630.1 68414.m02708 calcium-binding EF hand family protein ... 33 0.27
At3g51010.1 68416.m05585 expressed protein 33 0.36
At3g05830.1 68416.m00654 expressed protein 33 0.36
At2g41960.1 68415.m05191 expressed protein 33 0.36
At1g45545.1 68414.m05199 hypothetical protein contains Pfam prof... 33 0.36
At3g58940.1 68416.m06568 F-box family protein contains F-box dom... 32 0.48
At5g45520.1 68418.m05591 hypothetical protein 32 0.63
At4g39190.1 68417.m05549 expressed protein ; expression support... 32 0.63
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 32 0.63
At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains... 32 0.63
At1g56660.1 68414.m06516 expressed protein 32 0.63
At3g05270.1 68416.m00575 expressed protein similar to endosome-a... 31 0.84
At2g39300.1 68415.m04825 expressed protein ; expression supporte... 31 0.84
At1g79830.1 68414.m09326 expressed protein weak similarity to TA... 31 0.84
At5g05450.1 68418.m00587 DEAD/DEAH box helicase, putative (RH18) 31 1.1
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 31 1.1
At4g08180.1 68417.m01351 oxysterol-binding family protein simila... 31 1.5
At2g43820.1 68415.m05447 UDP-glucoronosyl/UDP-glucosyl transfera... 31 1.5
At5g15920.1 68418.m01862 structural maintenance of chromosomes (... 30 1.9
At5g03660.1 68418.m00325 expressed protein low similarity to out... 30 1.9
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 30 1.9
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 30 1.9
At1g04160.1 68414.m00406 myosin family protein contains Pfam pro... 30 1.9
At5g27230.1 68418.m03248 expressed protein ; expression support... 30 2.6
At5g26350.1 68418.m03150 hypothetical protein 30 2.6
At5g17890.1 68418.m02098 LIM domain-containing protein / disease... 30 2.6
At4g40020.1 68417.m05666 hypothetical protein 30 2.6
At4g38070.1 68417.m05377 bHLH family protein contains Pfam profi... 30 2.6
At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata format... 30 2.6
At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata format... 30 2.6
At3g10040.1 68416.m01204 expressed protein est match 30 2.6
At2g27280.1 68415.m03278 hypothetical protein 30 2.6
At1g73860.1 68414.m08552 kinesin motor protein-related similar t... 30 2.6
At1g48280.1 68414.m05393 hydroxyproline-rich glycoprotein family... 30 2.6
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela... 29 3.4
At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / hea... 29 3.4
At4g19050.1 68417.m02806 mob1/phocein family protein contains Pf... 29 3.4
At1g65440.1 68414.m07424 glycine-rich protein 29 3.4
At5g08080.1 68418.m00942 syntaxin, putative (SYP132) similar to ... 29 4.5
At5g05210.1 68418.m00555 nucleolar matrix protein-related contai... 29 4.5
At1g68790.1 68414.m07863 expressed protein 29 4.5
At1g54460.1 68414.m06212 expressed protein 29 4.5
At5g60530.1 68418.m07590 late embryogenesis abundant protein-rel... 29 5.9
At5g42880.1 68418.m05226 hypothetical protein contains Pfam prof... 29 5.9
At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR... 29 5.9
At5g04890.1 68418.m00513 small heat shock-like protein (RTM2) si... 29 5.9
At3g05110.1 68416.m00555 hypothetical protein 29 5.9
At1g32120.1 68414.m03952 expressed protein contains Pfam profile... 29 5.9
At1g09470.1 68414.m01059 expressed protein ; expression supporte... 29 5.9
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 29 5.9
At1g01670.1 68414.m00085 U-box domain-containing protein 29 5.9
At5g64910.1 68418.m08165 expressed protein ; expression support... 28 7.8
At5g55820.1 68418.m06956 expressed protein 28 7.8
At5g16030.1 68418.m01874 expressed protein 28 7.8
At3g05760.1 68416.m00647 expressed protein 28 7.8
At1g15340.1 68414.m01835 methyl-CpG-binding domain-containing pr... 28 7.8
At1g15200.1 68414.m01817 protein-protein interaction regulator f... 28 7.8
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 42.3 bits (95), Expect = 4e-04
Identities = 37/170 (21%), Positives = 80/170 (47%), Gaps = 4/170 (2%)
Frame = +1
Query: 436 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLER-NKTKEQLEEE 612
++K + E + K + K+ K + + +K+ + + + + NK KE E+
Sbjct: 1079 KKKEDKKEHEDNKSMKKEEDKKEKKKHEESKSRKKEEDKKDMEKLEDQNSNKKKEDKNEK 1138
Query: 613 KKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKER 792
KK S +K + E +K + + + I +++K ++++++K+ D ++ KE+
Sbjct: 1139 KK---SQHVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEVDKKEKKSSKDQQKKKEK 1195
Query: 793 QKQQLRHKALKKG-LDPEALTGKHPPKIQVASKYERR--VDTRSYTTKRN 933
+ ++ K LKK D + T K Q +K E+ D + TTK++
Sbjct: 1196 EMKESEEKKLKKNEEDRKKQTSVEENKKQKETKKEKNKPKDDKKNTTKQS 1245
Score = 32.7 bits (71), Expect = 0.36
Identities = 27/136 (19%), Positives = 70/136 (51%)
Frame = +1
Query: 430 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 609
+++++ +E K + L+ +K + S+N + +++KTKE+ ++
Sbjct: 970 ELKKQEDNKKETTKSENSKLKEENKDNKEKKE-SEDSASKNREKKEYEEKKSKTKEEAKK 1028
Query: 610 EKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKE 789
EKK S + + E K ++++++L K + ++ + +E+++ +++ K+ KE
Sbjct: 1029 EKKKSQDKKREEKDSEERKSKKEKEESRDL-----KAKKKEEETKEKKESENHKSKK-KE 1082
Query: 790 RQKQQLRHKALKKGLD 837
+K+ +K++KK D
Sbjct: 1083 DKKEHEDNKSMKKEED 1098
Score = 31.5 bits (68), Expect = 0.84
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 5/168 (2%)
Frame = +1
Query: 439 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLE----RNKTKEQLE 606
+ R++ E EKK + +A K+ K+ +K SE + E + K KE+
Sbjct: 1008 KNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEET 1067
Query: 607 EEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELK 786
+EKK S + + K + D K +E K E +K++ E + ++++ D K+++
Sbjct: 1068 KEKKESENHKSKKKEDKKEHEDNKSMKKEE-----DKKEKKKHE-ESKSRKKEEDKKDME 1121
Query: 787 ERQKQQLRHKALKKGLDPEALTGKHPPKIQVAS-KYERRVDTRSYTTK 927
+ + Q K K E +H ++ S K E++ + TK
Sbjct: 1122 KLEDQNSNKKKEDKN---EKKKSQHVKLVKKESDKKEKKENEEKSETK 1166
>At1g03080.1 68414.m00282 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1744
Score = 41.5 bits (93), Expect = 8e-04
Identities = 35/147 (23%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Frame = +1
Query: 433 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 612
++E+ R EAE Q + Q + + ++ ++ + L + + N +E+++E
Sbjct: 488 VQEENLRFMEAETAFQTLQQLHSQSQEELSTLALELQNRSQILKDMEARNNGLQEEVQEA 547
Query: 613 KKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETE---KYDLEERQKRQDYDLKEL 783
K S S+ L+ S+ L+++ +L E I KLE E + D +++ Y LKE
Sbjct: 548 KDQSKSLNELNLS-SAASIKSLQEEVSKLRETIQKLEAEVELRVDQRNALQQEIYCLKE- 605
Query: 784 KERQKQQLRHKALKKGLDPEALTGKHP 864
E + +H+++ + ++ L G HP
Sbjct: 606 -ELSQIGKKHQSMVEQVE---LVGLHP 628
>At5g25870.1 68418.m03069 hypothetical protein
Length = 173
Score = 39.5 bits (88), Expect = 0.003
Identities = 30/125 (24%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Frame = +1
Query: 487 LQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKP-LTIEGL 663
++ MK KT + ++ A++ ++ +E+++ ++ + K L IE
Sbjct: 1 MEDMKSLIKTSKELRKRIETRRENKEMAKMRETSDEKLIEKDEDVTKAGEFKEMLAIEKT 60
Query: 664 -----SVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKE--LKERQKQQLRHKAL 822
+ K + +E+ E +VKLE + Y+LEE + R++ +KE LK + K++L+ +
Sbjct: 61 WQIWEELLKEHDEFEEISEILVKLEKKYYELEEVENRENLQMKEKTLKRKYKRELKKSSK 120
Query: 823 KKGLD 837
K L+
Sbjct: 121 IKELE 125
>At5g52280.1 68418.m06488 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 853
Score = 39.1 bits (87), Expect = 0.004
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 5/154 (3%)
Frame = +1
Query: 433 IEEKRQRLE-EAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLE- 606
++EK +RL E E K K N +Q K+ E + KEQ +
Sbjct: 583 LQEKCKRLSLEMESKLSEHENLTKKTLAEANNLRLQNKTLEEMQEKTHTEITQEKEQRKH 642
Query: 607 -EEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYD--LK 777
EEK +LS++++ L E L + KLR ++ ETEK E R++R +++ L
Sbjct: 643 VEEKNKALSMKVQMLESEVLKLTKLRDESS-----AAATETEKIIQEWRKERDEFERKLS 697
Query: 778 ELKERQKQQLRHKALKKGLDPEALTGKHPPKIQV 879
KE K + L K + + T K +V
Sbjct: 698 LAKEVAKTAQKELTLTKSSNDDKETRLRNLKTEV 731
>At2g25350.1 68415.m03032 phox (PX) domain-containing protein weak
similarity to SP|Q9UTK5 Abnormal long morphology protein
1 (Sp8) {Schizosaccharomyces pombe}; contains Pfam
profile PF00787: PX domain
Length = 643
Score = 35.9 bits (79), Expect = 0.039
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Frame = +1
Query: 430 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 609
D+EE RQ+ E E K ++ D SKT N TI + E E + TK+QLE+
Sbjct: 455 DMEELRQKTFEMELKLKSKEDGSSD-SKTSGNSTISESHE------LLQEMDATKQQLED 507
Query: 610 --EKKISLSIRIK-PLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKE 780
+ + L + K + + V LR+ E+ + + + TEK D E+ +++ ++
Sbjct: 508 LSRRYVELEAKSKADIKVLVREVKSLRRSHMEMEKELTRSLTEKSDTEKLLQQERIIVEN 567
Query: 781 LKERQKQ 801
E +++
Sbjct: 568 TLEARRR 574
>At5g46070.1 68418.m05665 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding protein,
C-terminal domain
Length = 1060
Score = 34.7 bits (76), Expect = 0.090
Identities = 28/120 (23%), Positives = 59/120 (49%)
Frame = +1
Query: 439 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 618
++ Q E+A ++ ++ A KD T ++K ++ + + L+ ++K + E +
Sbjct: 654 KETQLREDALREEFSITLANKDEEITEKATKLEKAEQSLTVLRSDLKVAESKLESFEVEL 713
Query: 619 ISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQK 798
SL + + +T + +D +KA + KLE EK +E++ + + E+KER K
Sbjct: 714 ASLRLTLSEMTDK---LDSANKKALAYEKEANKLEQEKIRMEQKYRSEFQRFDEVKERCK 770
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 34.7 bits (76), Expect = 0.090
Identities = 25/113 (22%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Frame = +1
Query: 532 IQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECI 711
I++K+E + + NK++E+ + +KKI + + + E V+ + + QE E +
Sbjct: 281 IEEKTEEMKEQDNN-QANKSEEEEDVKKKIDENETPEKVDTESKEVESVEETTQEKEEEV 339
Query: 712 VKLETEKYDLEERQK---RQDYDLKELKERQKQQLR-HKALKKGLDPEALTGK 858
+ E+ + EE++K ++D ++++E +K++++ + +K + E+ GK
Sbjct: 340 KEEGKERVEEEEKEKEKVKEDDQKEKVEEEEKEKVKGDEEKEKVKEEESAEGK 392
>At1g10890.1 68414.m01251 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain
Length = 592
Score = 34.7 bits (76), Expect = 0.090
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Frame = +1
Query: 439 EKRQRLEEAEKKRQ--AMLQAMKDASKTGPNFTIQKK-SENFGLSNAQLE----RNKTKE 597
EK +R EE K+RQ A L+ +++ + I+KK E+ ++E + ++
Sbjct: 61 EKLKREEEERKRRQREAELKLIEEETVKRVEEAIRKKVEESLQSEKIKMEILTLLEEGRK 120
Query: 598 QLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKL------ETEKYDLEERQKR 759
+L EE L + IE ++ Q+ +E E I + E ++ + ERQ++
Sbjct: 121 RLNEEVAAQLEEEKEASLIEAKEKEEREQQEKEERERIAEENLKRVEEAQRKEAMERQRK 180
Query: 760 QDYDLKELKERQKQQLRHKALKKGLDPE 843
++ +EL+E Q+Q+ KK + E
Sbjct: 181 EEERYRELEELQRQKEEAMRRKKAEEEE 208
>At5g54410.1 68418.m06777 hypothetical protein
Length = 219
Score = 34.3 bits (75), Expect = 0.12
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Frame = +1
Query: 466 EKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLE--RNKTKEQ--LEEEKK---IS 624
+K QA+ +A+ A+K T+Q E +N +E R KT EQ LE EK+ +
Sbjct: 25 DKIVQALAEAIDAANKKLREETLQSNEE----ANDAMETFRRKTNEQKRLENEKRKQALK 80
Query: 625 LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQ 804
+ +K LT + +KL++ E + E E+ DL E +K++D +E K+ +++
Sbjct: 81 DAKDLKDLTYKTKVENKLKKTQPEK----DRAEEEEKDLTE-EKKKDPTEEEEKDPTEEK 135
Query: 805 LRHKALKKGLDPEALTGKHP 864
+ A +K DP K P
Sbjct: 136 KKEPAEEKKKDPTEEKKKDP 155
>At3g54670.1 68416.m06049 structural maintenance of chromosomes
(SMC) family protein similar to SMC1 protein [Bos
taurus] GI:4235253, 14S cohesin SMC1 subunit (SMC
protein) [Xenopus laevis] GI:3328231; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1257
Score = 34.3 bits (75), Expect = 0.12
Identities = 31/132 (23%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Frame = +1
Query: 439 EKRQRLEEAEK--KRQAMLQAM----KDASKTGPNFTIQKKSENFGLSNAQ-LERNKTKE 597
EK RL+E K KR+ L + D K + +K + + + ER K
Sbjct: 217 EKHLRLQEELKALKRERFLWQLYNIENDIEKANEDVDSEKSNRKDVMRELEKFEREAGKR 276
Query: 598 QLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKA----QELWECIVKLETEKYDLEERQKRQ 762
++E+ K + ++ R K + + + K++ + +E+ K+ET + D+++R+K +
Sbjct: 277 KVEQAKYLKEIAQREKKIAEKSSKLGKIQPELLRFKEEIARIKAKIETNRKDVDKRKKEK 336
Query: 763 DYDLKELKERQK 798
KE+++ QK
Sbjct: 337 GKHSKEIEQMQK 348
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 34.3 bits (75), Expect = 0.12
Identities = 23/170 (13%), Positives = 79/170 (46%), Gaps = 5/170 (2%)
Frame = +1
Query: 436 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL---- 603
EE+++ EEA+++ + + ++A + ++K E + + K +E++
Sbjct: 490 EERKREEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVERKR 549
Query: 604 -EEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKE 780
EE+++ + E +++ ++ ++ + + E E+ EE++++++ ++ +
Sbjct: 550 REEQERKRREEEARKREEERKREEEMAKRREQERQRKEREEVERKIREEQERKREEEMAK 609
Query: 781 LKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYTTKR 930
+E+++Q+ + +++ E + ++ + +R + KR
Sbjct: 610 RREQERQKKEREEMERKKREEEARKREEEMAKIREEERQRKEREDVERKR 659
Score = 32.7 bits (71), Expect = 0.36
Identities = 28/131 (21%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Frame = +1
Query: 439 EKRQRLEE-AEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 615
E+R++ EE A K+ +A + ++A + T +KK E + ER + +E+ + +
Sbjct: 444 ERRRKEEEEARKREEAKRREEEEAKRREEEETERKKREEEEARKREEERKREEEEAKRRE 503
Query: 616 KISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQ 795
+ K E K ++ ++ E K E E+ +R++R++ + K +E++
Sbjct: 504 E-----ERKKREEEAEQARKREEEREKEEEMAKKREEER----QRKEREEVERKRREEQE 554
Query: 796 KQQLRHKALKK 828
+++ +A K+
Sbjct: 555 RKRREEEARKR 565
>At1g45976.1 68414.m05206 expressed protein
Length = 325
Score = 34.3 bits (75), Expect = 0.12
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Frame = +1
Query: 550 NFGLS-NAQLERNKTKEQLEEEKKISLSIRIKPLTIE---GLSVDKLRQKAQELWECIVK 717
N+GL + ER K ++ LE +IS ++ ++ GLS+D R + + ++
Sbjct: 75 NYGLGLEPRRERIKEQDFLENNSQISSIDFLQARSVSTGLGLSLDNARVASSD-GSALLS 133
Query: 718 LETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKK 828
L + D++ +RQD D+ + Q QLRH L K
Sbjct: 134 LVGD--DIDRELQRQDADIDRFLKIQGDQLRHAILDK 168
>At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit GB:CAA77136 from [Nicotiana plumbaginifolia]
Length = 589
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +3
Query: 636 HQAADHRGSLRRQTPTEGPGTLGVHRQTRDREIRSRREAKETGLRLKRAQRKTKAATEAQ 815
H HR R ++ HR++RDR+ R R+ +R++ ++++ +E +
Sbjct: 103 HHRDRHRDRSRERSEKRDDLDDDHHRRSRDRDRRRSRDRDREVRHRRRSRSRSRSRSERR 162
Query: 816 SSQEGSRPRSAHRQAPAQNSSSVQVREA 899
S E R +S HR S S R +
Sbjct: 163 SRSE-HRHKSEHRSRSRSRSRSKSKRRS 189
>At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)
(FAS1) identical to FAS1 [Arabidopsis thaliana]
GI:4887626
Length = 815
Score = 33.5 bits (73), Expect = 0.21
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Frame = +1
Query: 571 QLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEER 750
++ER KE+L++EK+ L ++ VD+ K +E E +++ ++ + E+
Sbjct: 265 RMERQVLKEKLQQEKEQKL--------LQKAIVDE-NNKEKEETESRKRIKKQQDESEKE 315
Query: 751 QKRQDYDLKELKER---QKQ-QLRHKALKKGLDPEALTGKHPPKIQVASK 888
QKR++ + ELK++ QKQ + + LKK D +LT P +V ++
Sbjct: 316 QKRREKEQAELKKQLQVQKQASIMERFLKKSKD-SSLTQPKLPSSEVTAQ 364
>At3g23930.1 68416.m03006 expressed protein
Length = 224
Score = 33.1 bits (72), Expect = 0.27
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 163 KPAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQR 282
K K + G IK +D++ + QLKE EWRK+R
Sbjct: 17 KETSKDQSRGRRHLIKERDEREKVMFLQLKEAEREWRKER 56
>At3g07780.1 68416.m00949 expressed protein
Length = 566
Score = 33.1 bits (72), Expect = 0.27
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +1
Query: 559 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIE--GLSVDKLRQKAQELWECIVKLETEK 732
++ Q+ER K K+Q+EE ++I +R+K E L ++ + +A+ L E IVK + EK
Sbjct: 434 VAELQMERQKKKQQIEEVERI---VRLKQAEAEMFQLKANEAKVEAERL-ERIVKAKKEK 489
Query: 733 YDLEERQKRQDYDLKELKERQKQQLRHK 816
+ E L E E +K+ L K
Sbjct: 490 TEEEYASNYLKLRLSE-AEAEKEYLFEK 516
>At1g21630.1 68414.m02708 calcium-binding EF hand family protein
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain; ESTs gb|T44428 and gb|AA395440 come from this
gene
Length = 1218
Score = 33.1 bits (72), Expect = 0.27
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Frame = +1
Query: 577 ERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYD---LEE 747
E ++ EE+ K S ++ K LTIE + +++K EL++ IVK E K D ++E
Sbjct: 656 ELESLAKKYEEKYKKSGNVGSK-LTIEEATFRDIQEKKMELYQAIVKFEEGKLDDSIVKE 714
Query: 748 RQKRQDYDLKELKERQKQQLRHKALK 825
R + L+EL + ++ + ++
Sbjct: 715 RTEHIQSGLEELIKNLNERCKQYGVR 740
>At3g51010.1 68416.m05585 expressed protein
Length = 188
Score = 32.7 bits (71), Expect = 0.36
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +1
Query: 433 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 612
I ++R + +KKRQA++Q K + +++K A ER +QLEEE
Sbjct: 125 IGQRRAFILSEKKKRQALVQEAKRKKRIKQ---VERKMAAVARDRAWAERLIELQQLEEE 181
Query: 613 KKISLS 630
KK S+S
Sbjct: 182 KKKSMS 187
>At3g05830.1 68416.m00654 expressed protein
Length = 336
Score = 32.7 bits (71), Expect = 0.36
Identities = 39/146 (26%), Positives = 77/146 (52%), Gaps = 17/146 (11%)
Frame = +1
Query: 442 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLER-NKTKEQLEEE-K 615
++Q EE + + + +A+ A G + +QK E+ +S + ER N+ E +EE
Sbjct: 167 EKQLREEVRRIEREVTEAIAKAGIGGMDSELQKLLED--VSPMKFERMNRLVEVKDEEIT 224
Query: 616 KISLSIRI-----KPLTIEGLS-VDKLRQKAQELWECIVKLE-------TEKYDLEERQK 756
K+ IR+ K T E S ++K R+ Q+L + ++KLE ++ L+ + +
Sbjct: 225 KLKDEIRLMSGQWKHKTKELESQLEKQRRTDQDLKKKVLKLEFCLQEARSQTRKLQRKGE 284
Query: 757 RQDYDLKELKE--RQKQQLRHKALKK 828
R+D ++KE+++ +KQ L +++ K
Sbjct: 285 RRDMEIKEIRDLISEKQNLNNESWDK 310
>At2g41960.1 68415.m05191 expressed protein
Length = 1215
Score = 32.7 bits (71), Expect = 0.36
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 8/135 (5%)
Frame = +1
Query: 448 QRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKT---KEQLEEEKK 618
+ EEAE++ +L G QK +++ L+ L T KEQ+E+ +
Sbjct: 401 EHAEEAEEEEDEVLIDKDGNELDGECLRPQKHAKSPELAREFLLDAATVIFKEQVEKAFR 460
Query: 619 ISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEE--RQKRQDYDLKE---L 783
+ + LS + L Q+ + IV LE + LEE ++KR++ + KE +
Sbjct: 461 DGTARQNAHSIFVCLSSELLEQRVHIACKEIVTLEKQNKLLEEEEKEKREEEERKERKRI 520
Query: 784 KERQKQQLRHKALKK 828
KER+K+ R + LK+
Sbjct: 521 KEREKKLRRKERLKE 535
>At1g45545.1 68414.m05199 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 752
Score = 32.7 bits (71), Expect = 0.36
Identities = 22/76 (28%), Positives = 40/76 (52%)
Frame = +1
Query: 577 ERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQK 756
E K +E + + KK ++ + + +++ R +EL KLE EK + EE+Q
Sbjct: 194 ELEKIQEDMPDYKKQAVVAEEAKHQVV-MELERTRNVVEEL-----KLELEKAEKEEQQA 247
Query: 757 RQDYDLKELKERQKQQ 804
+QD DL +L+ + +Q
Sbjct: 248 KQDSDLAKLRVEEMEQ 263
>At3g58940.1 68416.m06568 F-box family protein contains F-box domain
Pfam:PF00646
Length = 618
Score = 32.3 bits (70), Expect = 0.48
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +1
Query: 691 QELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQL 807
QE+ + ++++ E DL+ERQ+ Q+ L +LKER + L
Sbjct: 486 QEMSQDYLQMQLEVADLKERQRDQEAKLADLKERLRAML 524
>At5g45520.1 68418.m05591 hypothetical protein
Length = 1167
Score = 31.9 bits (69), Expect = 0.63
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
Frame = +1
Query: 430 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENF-----GLSNAQLERNKTK 594
++E+ ++ E E++ + +++ KT P+ +K +N G SN + + +K K
Sbjct: 624 NLEDGKKHDEGKEERSLKSDEVVEEEKKTSPSEEATEKFQNKPGDQKGKSNVEGDGDKGK 683
Query: 595 EQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDL 774
LEEEKK K + E + +K ++ E + E DL+E +KR + +
Sbjct: 684 ADLEEEKKQDEVEAEKSKSDEIVEGEKKPDDKSKV-EKKGDGDKENADLDEGKKRDEVEA 742
Query: 775 KE 780
K+
Sbjct: 743 KK 744
>At4g39190.1 68417.m05549 expressed protein ; expression supported
by MPSS
Length = 277
Score = 31.9 bits (69), Expect = 0.63
Identities = 26/108 (24%), Positives = 52/108 (48%)
Frame = +1
Query: 445 RQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKIS 624
+ + EK+ +A +A + ++ +K+S + KTK ++ EKK+
Sbjct: 119 QDEMRSGEKQSEAENEAKQSITENKAKENEEKQSITESRVKKSVTEKKTK-RIISEKKVK 177
Query: 625 LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDY 768
S + + LT + SV+ R+K E+ + + EK +L E+++ Q Y
Sbjct: 178 QS-KPEKLTKQSTSVN--REKQSEVEHKDITMTIEKQNLTEKRQIQSY 222
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 31.9 bits (69), Expect = 0.63
Identities = 31/136 (22%), Positives = 64/136 (47%), Gaps = 13/136 (9%)
Frame = +1
Query: 436 EEKRQRLEEAEKKRQAMLQAMKDA----SKTGPNFTIQKK------SENFGLSNAQLERN 585
EE+++ +E+A++++ +++ + A ++ G + +KK + L N+ +
Sbjct: 188 EERKKEVEKAKEEQLSLINQLNSAKDLVTELGRELSSEKKLCEKLKDQIESLENSLSKAG 247
Query: 586 KTKEQLEEE--KKISLSIRIKP-LTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQK 756
+ KE LE + +K+ L ++ + + L + +KAQ + K E E +L
Sbjct: 248 EDKEALETKLREKLDLVEGLQDRINLLSLELKDSEEKAQRFNASLAKKEAELKELNSIYT 307
Query: 757 RQDYDLKELKERQKQQ 804
+ DL E K KQQ
Sbjct: 308 QTSRDLAEAKLEIKQQ 323
Score = 31.9 bits (69), Expect = 0.63
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Frame = +1
Query: 439 EKRQRLEEAEKKRQAMLQAMKDASK---TGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 609
E ++ +A + R + L+ M D S+ + + E + + + ERN E+ +
Sbjct: 444 EGTKKTLQASRDRVSDLETMLDESRALCSKLESELAIVHEEWKEAKERYERNLDAEKQKN 503
Query: 610 EKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKE 789
E IS S + D+L EL E VK ++ + +L E K+ + KEL+E
Sbjct: 504 E--ISASELALEKDLRRRVKDELEGVTHELKESSVKNQSLQKELVEIYKKVETSNKELEE 561
Query: 790 RQKQQLRHKALKKGLDPEALTGKHPPK 870
+K L KG++ + L + K
Sbjct: 562 EKKTVLSLNKEVKGMEKQILMEREARK 588
>At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 1340
Score = 31.9 bits (69), Expect = 0.63
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 1/140 (0%)
Frame = +1
Query: 433 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNA-QLERNKTKEQLEE 609
++ K++ KK++ + K +KTG + +KK+ + +S +++RN T E+ +
Sbjct: 898 VDVKQETGSPDTKKKEGASSSSKKDTKTGEDKKAEKKNNSETMSEGKKIDRNNTDEKEVK 957
Query: 610 EKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKE 789
EK I+ + E K R+K +E L+T K + + + + L L +
Sbjct: 958 EKVTEKEIKERGGKDESRIQVKDRKKCEEPPRAGFILQT-KRNKDSKLRSLSASLDSLLD 1016
Query: 790 RQKQQLRHKALKKGLDPEAL 849
+ L + + L E+L
Sbjct: 1017 YTDKDLDESSFEISLFAESL 1036
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 31.9 bits (69), Expect = 0.63
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
Frame = +1
Query: 430 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 609
D+ ++++ LEE + K+ + KD S T KK + + E K K + E+
Sbjct: 161 DVSQEKEELEEEDGKKNKKKE--KDESGTEEKKKKPKKEKKQKEESKSNEDKKVKGKKEK 218
Query: 610 EKKISLSIRIKPLTIEGLSVDK-LRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELK 786
+K L + E D+ +++K + + K E ++ EE++K+ D + KE
Sbjct: 219 GEKGDLEKEDEEKKKEHDETDQEMKEKDSKKNK---KKEKDESCAEEKKKKPDKEKKEKD 275
Query: 787 E-RQKQQLRHKALK-KGLDPE 843
E +K+ + K K KG PE
Sbjct: 276 ESTEKEDKKLKGKKGKGEKPE 296
>At3g05270.1 68416.m00575 expressed protein similar to
endosome-associated protein (EEA1) (GI:1016368) [Homo
sapiens]; similar to smooth muscle myosin heavy chain
(GI:4417214) [Homo sapiens; contains Pfam profile
PF05911: Plant protein of unknown function (DUF869)
Length = 615
Score = 31.5 bits (68), Expect = 0.84
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Frame = +1
Query: 469 KKRQAMLQAMKDASKTGPN--FTIQKKSENFGLSNAQLER--NKTKEQLEEEKKISLSIR 636
+K A + +K KT +++K E + QLE N +KEQ+E +L R
Sbjct: 335 EKSNAHVNQLKHELKTSLRRISELEEKVEMVEVEKLQLEMALNGSKEQIE-----ALQSR 389
Query: 637 IKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQL 807
+K + + + KL + QEL + + + DL+ + + +L EL+ R+ ++L
Sbjct: 390 LKEIEGKLSEMKKLEAENQELELLLGESGKQMEDLQRQLNKAQVNLSELETRRAEKL 446
>At2g39300.1 68415.m04825 expressed protein ; expression supported
by MPSS
Length = 768
Score = 31.5 bits (68), Expect = 0.84
Identities = 19/106 (17%), Positives = 57/106 (53%), Gaps = 6/106 (5%)
Frame = +1
Query: 490 QAMKDASKTGPNFTIQKKSE-----NFGLSNAQLERNKTKEQLEEEKKIS-LSIRIKPLT 651
+++K + +T + ++K +E S+A +++ E +++++ I+ + I ++
Sbjct: 625 ESLKRSLQTVTSLLLEKSNEMASNSESSCSSAARPSSRSVEMVKKDENINRMEINLQEAA 684
Query: 652 IEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKE 789
E L++ K+ ++ +E+W+ + + DLE ++ +++L+E
Sbjct: 685 KELLTLPKVLEEREEMWKEVKECRKRNMDLESEKEMLKKKVEKLEE 730
>At1g79830.1 68414.m09326 expressed protein weak similarity to TATA
element modulatory factor (TMF) (Swiss-Prot:P82094)
[Homo sapiens]
Length = 927
Score = 31.5 bits (68), Expect = 0.84
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +1
Query: 664 SVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGL 834
S++K RQ+A E + + + E LE R + + +++EL+ + KQ+L+ L L
Sbjct: 700 SLEKERQRAAENRQEYLAAKEEADTLEGRANQLEVEIRELRRKHKQELQEVLLHNEL 756
>At5g05450.1 68418.m00587 DEAD/DEAH box helicase, putative (RH18)
Length = 593
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/66 (22%), Positives = 34/66 (51%)
Frame = +1
Query: 712 VKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKY 891
VK E K+ + R+K++ +L+ KE+++++ + K +K +D A ++ K
Sbjct: 491 VKFEEIKFKDKYREKQRQQNLQVRKEKRQEEKKEKGKRKRVDASASNDPKKASRKLTGKQ 550
Query: 892 ERRVDT 909
+ + T
Sbjct: 551 RQTIQT 556
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Frame = +1
Query: 433 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 612
+ E ++L + + ML+ + + S N QK+ E +N E KE++E
Sbjct: 684 LHELSEKLSFKTSQMERMLENLDEKSNEIDN---QKRHEEDVTANLNQEIKILKEEIENL 740
Query: 613 KKISLSIRIKPLTIEGLSVD--KLRQKAQELWECIVKLETEKYDLEER 750
KK S+ ++ E L VD K ++ E + + +K +LE +
Sbjct: 741 KKNQDSLMLQAEQAENLRVDLEKTKKSVMEAEASLQRENMKKIELESK 788
>At4g08180.1 68417.m01351 oxysterol-binding family protein similar
to SP|Q969R2 Oxysterol-binding protein 2 {Homo sapiens};
contains Pfam profiles PF00169: PH domain, PF01237:
Oxysterol-binding protein
Length = 814
Score = 30.7 bits (66), Expect = 1.5
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 2/122 (1%)
Frame = +1
Query: 487 LQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLS 666
LQA+KD N + + N +S ++ R + E+ E I +I L
Sbjct: 230 LQAVKDMFPRMSNSELMAPTNNLAMSTEKI-RLRLIEEGVSELAIQDCEQIMKSEFSALQ 288
Query: 667 VDK--LRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDP 840
L+QK L + + +LETEK DLE D ++ +LRH+ +G
Sbjct: 289 SQLVLLKQKQWLLIDTLRQLETEKVDLENTV--VDESQRQADNGCSGELRHEKFSEGTAT 346
Query: 841 EA 846
E+
Sbjct: 347 ES 348
>At2g43820.1 68415.m05447 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 449
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/49 (26%), Positives = 30/49 (61%)
Frame = +1
Query: 691 QELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLD 837
Q++W+ V+++TEK +++ ++ +KE+ E ++ + K +KK D
Sbjct: 375 QDVWKAGVRVKTEKESGIAKREEIEFSIKEVMEGERSKEMKKNVKKWRD 423
>At5g15920.1 68418.m01862 structural maintenance of chromosomes (SMC)
family protein (MSS2) similar to SMC-related protein MSS2
[Arabidopsis thaliana] GI:9965743; contains Pfam profiles
PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1053
Score = 30.3 bits (65), Expect = 1.9
Identities = 31/108 (28%), Positives = 47/108 (43%)
Frame = +1
Query: 457 EEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIR 636
+E E K+Q + A +DA T + K E +E T E+LE + +LS
Sbjct: 778 KEVEGKQQRLATAKRDAESVA-TITPELKKEF-------MEMPTTVEELEAAIQDNLSQA 829
Query: 637 IKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKE 780
L I + + + +++ KLET+K DL K D LKE
Sbjct: 830 NSILFINENILQEYEHRQSQIYTISTKLETDKRDLSICMKEID-SLKE 876
>At5g03660.1 68418.m00325 expressed protein low similarity to outer
surface protein F [Borrelia burgdorferi] GI:466482;
contains Pfam profile PF04949: Family of unknown
function (DUF662)
Length = 173
Score = 30.3 bits (65), Expect = 1.9
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Frame = +1
Query: 496 MKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDK 675
+KD +F+ Q K E+ LS L K KE+ E+KK+ + R++ G D+
Sbjct: 18 LKDQLSESMSFSSQMKKEDDELSMKALSAFKAKEEEIEKKKMEIRERVQAQL--GRVEDE 75
Query: 676 LRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKE-RQKQQLRHKALKKGLDPEALT 852
++ A E + + ++ +K+ D KELK Q + K L EA
Sbjct: 76 SKRLAMIREELEGFADPMRKEVTMVRKKIDSLDKELKPLGNTVQKKETEYKDAL--EAFN 133
Query: 853 GKHPPKIQVASKYE 894
K+ K+++ +K +
Sbjct: 134 EKNKEKVELITKLQ 147
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +3
Query: 615 EDLPVHPHQAADH-RGSLRRQTPTEGPGTLGVHRQTRDREIRSRREAKETGLRLKRAQRK 791
E + H AA+ +G ++ PG + DRE + R+ + R+KR +R
Sbjct: 174 ETSQIRAHDAAEREKGKSKKSNKNFSPGDVS------DREAKETRKKESNEKRIKRKRRY 227
Query: 792 TKAATEAQSSQEGSRPRSAHRQAPAQNSSS 881
+ + + + SS S S + + SSS
Sbjct: 228 SSSDSYSSSSDSDSDSESEAYSSSSYESSS 257
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +3
Query: 615 EDLPVHPHQAADH-RGSLRRQTPTEGPGTLGVHRQTRDREIRSRREAKETGLRLKRAQRK 791
E + H AA+ +G ++ PG + DRE + R+ + R+KR +R
Sbjct: 174 ETSQIRAHDAAEREKGKSKKSNKNFSPGDVS------DREAKETRKKESNEKRIKRKRRY 227
Query: 792 TKAATEAQSSQEGSRPRSAHRQAPAQNSSS 881
+ + + + SS S S + + SSS
Sbjct: 228 SSSDSYSSSSDSDSDSESEAYSSSSYESSS 257
>At1g04160.1 68414.m00406 myosin family protein contains Pfam
profiles: PF02736 myosin N-terminal SH3-like domain,
PF00063 myosin head (motor domain), PF00612 IQ
calmodulin-binding motif, PF01843: DIL domain
Length = 1500
Score = 30.3 bits (65), Expect = 1.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 460 EAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGL----SNAQLERNKTKEQLEEEKKISL 627
EA K +L +K+ + +EN L S+ +++ ++T ++L E +IS
Sbjct: 949 EAAKTVSEVLPIIKEVPVVDQELMEKLTNENEKLKGMVSSLEIKIDETAKELHETARISQ 1008
Query: 628 SIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEK 732
R+K V KL+ Q L E I +ETEK
Sbjct: 1009 D-RLKQALAAESKVAKLKTAMQRLEEKISDMETEK 1042
>At5g27230.1 68418.m03248 expressed protein ; expression supported
by MPSS
Length = 948
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/83 (25%), Positives = 45/83 (54%)
Frame = +1
Query: 580 RNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKR 759
R+ +E+ +E + + SI++K L +E +K +EL C++ + E +K
Sbjct: 50 RSVLEERAKELEALEESIKVKALELE--------KKEKEL--CLIDESMKAKQSEFEKKE 99
Query: 760 QDYDLKELKERQKQQLRHKALKK 828
+D+DL++ E +K++ + L+K
Sbjct: 100 KDFDLEQKAEVEKRKREVEQLEK 122
>At5g26350.1 68418.m03150 hypothetical protein
Length = 126
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +1
Query: 670 DKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQK 798
+KL ++ ++L + +LE EK LEE +K+ ++++ ER+K
Sbjct: 58 NKLEEEKKKLEKEKKQLEEEKKQLEEEKKQLEFEVMGANEREK 100
>At5g17890.1 68418.m02098 LIM domain-containing protein / disease
resistance protein-related low similarity to disease
resistance protein RPP4 [Arabidopsis thaliana]
GI:20270890; contains Pfam profiles PF00412: LIM domain,
PF00931: NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1613
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/74 (25%), Positives = 43/74 (58%)
Frame = +1
Query: 592 KEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYD 771
+E L+E +K+ + ++ IE + K++Q A E + +K E+ E+R+ +D++
Sbjct: 1124 EEALKEREKLEDTRELQIALIESKKIKKIKQ-ADERDQ--IKHADER---EQRKHSKDHE 1177
Query: 772 LKELKERQKQQLRH 813
+E++ +K++ RH
Sbjct: 1178 EEEIESNEKEERRH 1191
>At4g40020.1 68417.m05666 hypothetical protein
Length = 615
Score = 29.9 bits (64), Expect = 2.6
Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 5/141 (3%)
Frame = +1
Query: 445 RQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE---- 612
+Q + EA ++A + A + + K E + ++ER K E + +
Sbjct: 303 KQAINEANVAKEAA--GIARAENSNLKDALLDKEEELQFALKEIERVKVNEAVANDNIKK 360
Query: 613 -KKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKE 789
KK+ I + + S+++ +E+ E + K EK EE+++ + KE KE
Sbjct: 361 LKKMLSEIEVAMEEEKQRSLNRQESMPKEVVEVVEKKIEEKEKKEEKKENK----KEKKE 416
Query: 790 RQKQQLRHKALKKGLDPEALT 852
+K++ H K+ + + T
Sbjct: 417 SKKEKKEHSEKKEDKEKKEQT 437
>At4g38070.1 68417.m05377 bHLH family protein contains Pfam profile:
PF00010 helix-loop-helix DNA-binding domain; PMID:
12679534; putative bHLH131 transcription factor
Length = 1513
Score = 29.9 bits (64), Expect = 2.6
Identities = 32/132 (24%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Frame = +1
Query: 451 RLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLS 630
+ E E++++ M+ + +AS+ N +++K+ + A++E K + E K+I
Sbjct: 102 KYREFEEEKRNMMSGLDEASEK--NIDLEQKNNVY---RAEIEGLKGLLAVAETKRIEAE 156
Query: 631 IRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKER-QKQQL 807
T++G+ + R + +VK+E EK +EE+ K + K L+E +K +
Sbjct: 157 -----KTVKGMKEMRGRD------DVVVKMEEEKSQVEEKLKWKKEQFKHLEEAYEKLKN 205
Query: 808 RHKALKKGLDPE 843
K KK + E
Sbjct: 206 LFKDSKKEWEEE 217
>At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 735 VFLGLEFDDALPEFLGLLSEFVDGET 658
VF+ EFD+ LP++L L VD +T
Sbjct: 423 VFISDEFDELLPKYLSFLKGLVDSDT 448
>At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 735 VFLGLEFDDALPEFLGLLSEFVDGET 658
VF+ EFD+ LP++L L VD +T
Sbjct: 423 VFISDEFDELLPKYLSFLKGLVDSDT 448
>At3g10040.1 68416.m01204 expressed protein est match
Length = 431
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/89 (22%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +1
Query: 568 AQLERNKTKEQLEEE--KKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDL 741
A+ ++ +E EEE KK +S +K L E SV + + +WE + + ++
Sbjct: 297 AEDSESEMEESEEEETRKKRRISTAVKRLREEAASV--VEDVGKSVWEKKEWIRRKMLEI 354
Query: 742 EERQKRQDYDLKELKERQKQQLRHKALKK 828
EE++ +++ E+++++ + +R+++ K+
Sbjct: 355 EEKKIGYEWEGVEMEKQRVKWMRYRSKKE 383
>At2g27280.1 68415.m03278 hypothetical protein
Length = 427
Score = 29.9 bits (64), Expect = 2.6
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Frame = +1
Query: 523 NFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELW 702
NF ++ K+ N ++ KE+L+EE+K S+ + GL + QK Q
Sbjct: 105 NFLVKDKAVNAIITAV----TDAKERLKEEEKESVKQATVKIKKYGLQIRAPSQKKQSSS 160
Query: 703 ECIVKL------ETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEA 846
+++ + E+ D+E+ RQ K LK+ +KQ KA+++ DP A
Sbjct: 161 RPLLRTASIFGEDDEENDVEKEISRQASKTKSLKKIEKQ--HKKAIEE--DPSA 210
>At1g73860.1 68414.m08552 kinesin motor protein-related similar to
kinesin-C GB:AAF04841 from [Strongylocentrotus
purpuratus]
Length = 1030
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +1
Query: 715 KLETEKYDLEERQKRQDYDL-KELKERQKQQLRHKALKKGLD 837
++ETEK EE++K ++ D+ K +K+ + L ALK+ L+
Sbjct: 212 QIETEKSMWEEKKKHEEEDMVKLMKQNDQHNLEISALKQELE 253
>At1g48280.1 68414.m05393 hydroxyproline-rich glycoprotein family
protein
Length = 558
Score = 29.9 bits (64), Expect = 2.6
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 436 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTK---EQLE 606
+EKR+R+EE E+K +KD N ++ + E SN +LE N K + +
Sbjct: 112 DEKRKRMEELEEKLVVNESLIKDLQLQVLN--LKTELEEARNSNVELELNNRKLSQDLVS 169
Query: 607 EEKKI-SLSIRIKP 645
E KI SLS KP
Sbjct: 170 AEAKISSLSSNDKP 183
>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
low similarity to nuclear matrix constituent protein 1
(NMCP1) [Daucus carota] GI:2190187
Length = 1042
Score = 29.5 bits (63), Expect = 3.4
Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Frame = +1
Query: 433 IEEKRQRLEEA-EKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 609
IE +++ LE E KR+ + + +D K F +KK E + + + K E ++
Sbjct: 648 IEMQKRELEYCIENKREELENSSRDREKA---FEQEKKLEEERIQSLKEMAEKELEHVQV 704
Query: 610 EKKISLSIRIK-PLTIEGLSVD--KLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKE 780
E K + R++ L E + +L+ +EL KLET+++ L + ++++E
Sbjct: 705 ELKRLDAERLEIKLDRERREREWAELKDSVEELKVQREKLETQRHMLRAERDEIRHEIEE 764
Query: 781 LKE 789
LK+
Sbjct: 765 LKK 767
>At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / heat
shock protein 83 (HSP83) nearly identical to SP|P27323
Heat shock protein 81-1 (HSP81-1) (Heat shock protein
83) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 705
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 172 PKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEW 270
PK+E EG+ E + + +K +++KE +EW
Sbjct: 232 PKKENEGEVEEVDEEKEKDGKKKKKIKEVSHEW 264
>At4g19050.1 68417.m02806 mob1/phocein family protein contains Pfam
PF03637: Mob1/phocein family; contains Pfam F00560:
Leucine Rich Repeats; contains TIGRFAMS profile
TIGR01612: reticulocyte binding protein; hypothetical
protein YIL106w, Saccharomyces cerevisiae, PIR2:S48466
Length = 1405
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/71 (25%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +1
Query: 613 KKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQ--DYDLKELK 786
K++S + + + L ++K + + L+E + + Y+ EE ++ DY L+ LK
Sbjct: 44 KEVSQRVTQEKYNVLWLHLNKKIEDEKSLYEILAAQLSIIYEFEEGEEPDELDYPLESLK 103
Query: 787 ERQKQQ-LRHK 816
E+ K++ ++HK
Sbjct: 104 EKIKEEMIKHK 114
>At1g65440.1 68414.m07424 glycine-rich protein
Length = 1647
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1
Query: 709 IVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPE 843
IV E E+ + EE ++R+D D +ERQK++ + K +GLD +
Sbjct: 52 IVNDEDEEEEEEEDEERKDSD----EERQKKKKKRKKKDEGLDED 92
>At5g08080.1 68418.m00942 syntaxin, putative (SYP132) similar to
SP|Q9ZSD4 Syntaxin 121 (AtSYP121) (Syntaxin-related
protein At-Syr1) {Arabidopsis thaliana}
Length = 304
Score = 29.1 bits (62), Expect = 4.5
Identities = 24/83 (28%), Positives = 40/83 (48%)
Frame = +1
Query: 433 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 612
I+++ +L++ KK QA + K +K I+K E + R K +LEE
Sbjct: 44 IDKQYDKLDKLLKKLQASHEESKSVTKAPAMKAIKKTMEKDVDEVGSIARF-IKGKLEEL 102
Query: 613 KKISLSIRIKPLTIEGLSVDKLR 681
+ +L+ R KP +G VD+ R
Sbjct: 103 DRENLANRQKPGCAKGSGVDRSR 125
>At5g05210.1 68418.m00555 nucleolar matrix protein-related contains
Pfam domain, PF04935: Surfeit locus protein 6
Length = 386
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/59 (20%), Positives = 33/59 (55%)
Frame = +1
Query: 445 RQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKI 621
+Q + + +K+++ + K+ + F ++K+ + G ++E+NK ++ + EKK+
Sbjct: 310 KQSIHKDKKRQEKNAEKWKERIEGQQKFKVEKQQKRSGNIADRIEQNKMRKIAKREKKL 368
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 29.1 bits (62), Expect = 4.5
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Frame = +3
Query: 648 DHRGSLRRQTPT-----EGP-GTLGVHRQTRDREIRSRREAKETGLRLKRAQRKTKAATE 809
DH S Q+ T EGP G+L ++ D+ R R + G ++ + TKA +
Sbjct: 821 DHEPSATEQSFTDSRIQEGPEGSLQSEMKS-DKPRRGRGRGRGRGKSVRGRSQATKAVSR 879
Query: 810 AQSSQEGSRPRSAHRQAPAQNSSSVQ 887
+G PR R+ ++ + S Q
Sbjct: 880 DSKPSDGETPRKRQREQTSRITESEQ 905
>At1g54460.1 68414.m06212 expressed protein
Length = 338
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 715 KLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYE 894
KLE ++ LE ++ + LKE +E +QLR K + + PP Q K+
Sbjct: 182 KLEEKQKALEAEKRENEKRLKEEQEAVTKQLRKNMAYKANPVPSFYQEGPPPKQPLKKFP 241
Query: 895 -RRVDTRSYTTKRNCS 939
R + + +++CS
Sbjct: 242 LTRPKSPNLNRRKSCS 257
>At5g60530.1 68418.m07590 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 439
Score = 28.7 bits (61), Expect = 5.9
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +1
Query: 517 GPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQE 696
G + K + G SN ++K +E+ ++EK + E +K +E
Sbjct: 38 GNEVQVDKGKGDNGKSNGNGPKDKEQEKKDKEKAAKDKKEKEKKDKEEKEKKDKERKEKE 97
Query: 697 LWECIVKLETEKYDLEERQK-RQDYDLKELKERQKQQLRHKALKKGLDP 840
+ KLE EK D E ++K R++ + K +++ K++ A + L P
Sbjct: 98 KKD---KLEKEKKDKERKEKERKEKERKAKEKKDKEESEAAARYRILSP 143
>At5g42880.1 68418.m05226 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 751
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +1
Query: 712 VKLETEKYDLEERQKRQDYDLKELKERQKQQ 804
+KLE EK + EE+Q +QD +L +++ + ++
Sbjct: 212 LKLELEKAEKEEQQAKQDSELAQMRVEEMEK 242
>At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1038
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 430 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLE 579
D EKRQ L EAE+ R + S G +F + K SE F +S E
Sbjct: 502 DEPEKRQFLVEAEEIRDVLANETGTGSVLGISFDMSKVSE-FSISGRAFE 550
>At5g04890.1 68418.m00513 small heat shock-like protein (RTM2)
similar to 17.9 kDa heat-shock protein [Helianthus
annuus] GI:11990130; contains Pfam profile PF00011:
Hsp20/alpha crystallin family; supporting cDNA
gi|7407072|gb|AF208051.1|AF208051; identical to cDNA
small heat shock-like protein (RTM2) GI:7407072, small
heat shock-like protein [Arabidopsis thaliana]
GI:7407073
Length = 366
Score = 28.7 bits (61), Expect = 5.9
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = +1
Query: 535 QKKSENFGLSNAQL--ERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLR-QKAQELWE 705
+K+ E QL E+ +L+EE K ++ L E + ++ +K QE E
Sbjct: 142 EKEEEEAKQMKKQLLEEKEALIRKLQEEAKAKEEAEMRKLQEEAKAKEEAAAKKLQEEIE 201
Query: 706 CIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLD 837
KLE K LEER + ++ L+++K ++ +L+ +K +D
Sbjct: 202 AKEKLEERK--LEER-RLEERKLEDMKLAEEAKLKKIQERKSVD 242
>At3g05110.1 68416.m00555 hypothetical protein
Length = 372
Score = 28.7 bits (61), Expect = 5.9
Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Frame = +1
Query: 568 AQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEE 747
+ LE+ + ++ EE S +R + IE S+ +L + EL E V+ + + +DL+E
Sbjct: 34 SDLEQIQKEDSSEEICTESERMRKETELIE-TSLKQLEARENELRE--VEAKRKFFDLKE 90
Query: 748 RQKRQDYDLKELKERQKQQLRHKALKKG--LDPEALT 852
++ + ELK+RQ Q+ ++++ G +D E LT
Sbjct: 91 KELEEKEKELELKQRQVQE---RSIQDGPSVDAEPLT 124
>At1g32120.1 68414.m03952 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 1206
Score = 28.7 bits (61), Expect = 5.9
Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 11/97 (11%)
Frame = +3
Query: 624 PVHPHQAADHRG-----SLRRQTPTEGPGTLGVHRQTRDREIRSRREAKETGL------R 770
P H+AA+ RG SLR +L TR + RS + G R
Sbjct: 792 PPRSHEAANSRGYNHTPSLRASKEPYKSSSLSGSSSTRKKPPRSHEASSSRGYNHPPSPR 851
Query: 771 LKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQNSSS 881
+ + KT + + + S+ PRS+ NSSS
Sbjct: 852 VSKELNKTPSISGSPSATRNKSPRSSENVNSCGNSSS 888
>At1g09470.1 68414.m01059 expressed protein ; expression supported
by MPSS
Length = 336
Score = 28.7 bits (61), Expect = 5.9
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Frame = +1
Query: 604 EEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLE-------TEKYDLEERQKRQ 762
+E K IS R K +E V+ R+ QEL + ++KLE + L++ +R
Sbjct: 228 DELKIISAHWRFKTKELED-QVENQRRIDQELKKKVLKLEFCLRETRIQTRKLQKMGERN 286
Query: 763 DYDLKELKERQKQQLRHKA 819
D ++ELKE+ + +H+A
Sbjct: 287 DVAIQELKEQLAAKKQHEA 305
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 28.7 bits (61), Expect = 5.9
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Frame = +1
Query: 433 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKT---KEQL 603
+E+K + LEE +K + A+ A + G +IQ + +S + N++ +L
Sbjct: 155 LEQKLKSLEELSEKVSELKSALIVAEEEGKKSSIQMQEYQEKVSKLESSLNQSSARNSEL 214
Query: 604 EEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKEL 783
EE+ +I+L + I +S K + Q L++ +L+ EK + +K +D + ++
Sbjct: 215 EEDLRIALQKGAEHEDIGNVST-KRSVELQGLFQ-TSQLKLEKAE----EKLKDLEAIQV 268
Query: 784 KERQKQQLRHKALKKGLD 837
K + A++K D
Sbjct: 269 KNSSLEATLSVAMEKERD 286
>At1g01670.1 68414.m00085 U-box domain-containing protein
Length = 365
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +1
Query: 436 EEKRQRLEEAEKKRQ-----AMLQAMKDASKTGPNFT-IQKKSENFGLSNAQLERNKTKE 597
EE+R+RLE E KR+ M + ++A + T I E + E N+ K
Sbjct: 177 EEQRRRLEIEELKREKEQRDKMRRVREEALSSSSGVTKILYNEEVMRRREVEAELNRAKA 236
Query: 598 QLEEEKKISLSIR 636
++E+ K++ + ++
Sbjct: 237 EIEDMKRVQIELK 249
>At5g64910.1 68418.m08165 expressed protein ; expression supported
by MPSS
Length = 487
Score = 28.3 bits (60), Expect = 7.8
Identities = 33/163 (20%), Positives = 62/163 (38%)
Frame = +1
Query: 454 LEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSI 633
+ + KKR + KTG + + K + + E T+E E E K+
Sbjct: 1 MRKGTKKRGGSRGGSRGGRKTGASSSASKNDDAVVEATTTQETQPTQETEETEDKVESPA 60
Query: 634 RIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRH 813
+ EG + ++ + +E + E+ EE K + KE R+ ++
Sbjct: 61 PEE----EGKNEEEANENQEEEAAKVESKAAEEGGNEEEAKEDKEEEKEEAAREDKEEEE 116
Query: 814 KALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYTTKRNCSR 942
+A+K E+ + K K +S+ + R R TK +
Sbjct: 117 EAVK---PDESASQKEEAKGASSSEPQLRRGKRKRGTKTEAEK 156
>At5g55820.1 68418.m06956 expressed protein
Length = 1826
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/109 (18%), Positives = 53/109 (48%)
Frame = +1
Query: 574 LERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQ 753
LE + +++ E+K+ ++ + + +E ++ K QE+ + + + +K + E
Sbjct: 1522 LEAAEASKRIAEQKENDRKLKKEAMKLERAKQEQENLKKQEIEKKKKEEDRKKKEAEMAW 1581
Query: 754 KRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERR 900
K++ K+ +ER++++ K+ + E K K Q + ++R+
Sbjct: 1582 KQEMEKKKKEEERKRKEFEMADRKRQREEEDKRLKEAKKRQRIADFQRQ 1630
>At5g16030.1 68418.m01874 expressed protein
Length = 339
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +1
Query: 646 LTIEGLSVD-KLRQKA-QELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKA 819
L ++G D KL +K +E + + E E+ + EE+Q + D KE ++ Q+++ + K
Sbjct: 244 LKVKGQQQDVKLEEKEKEEEKQDMSNEEDEEEEEEEKQDMSEEDDKEEEDEQEEEEKTKK 303
Query: 820 LKKG 831
K+G
Sbjct: 304 KKRG 307
>At3g05760.1 68416.m00647 expressed protein
Length = 202
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/66 (21%), Positives = 39/66 (59%)
Frame = +1
Query: 646 LTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALK 825
+ +E S+++++++ + L + + DL+ER ++Q + +ELK +++++ + K
Sbjct: 115 MRVERSSLEQVQERFEVLKKRKAPGTFTEQDLDERIRKQQEEEEELKRQRREKKKEKKKG 174
Query: 826 KGLDPE 843
K ++ E
Sbjct: 175 KVVEEE 180
>At1g15340.1 68414.m01835 methyl-CpG-binding domain-containing
protein contains Pfam profile PF01429: Methyl-CpG
binding domain
Length = 384
Score = 28.3 bits (60), Expect = 7.8
Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Frame = +3
Query: 612 EEDLPVHP-HQAADHRGSLRRQTPTEGPGTLGVHRQTRDREIRSRREAKETGLRLKRAQR 788
E D+ P + +++GS+ + E TLG D E +E+KE + A+
Sbjct: 255 EADVEKKPAEEKTENKGSVTTEANGEQNVTLGEPNLDADAEADKGKESKEYDEKTTEAEA 314
Query: 789 KTKAATEAQSSQEGSRPRSAHRQAPAQNSSSVQVREACRHTILHDKK 929
+ + Q S E +A+++ Q S + A +D K
Sbjct: 315 NKE--NDTQESDEKKTEAAANKENETQESDVKKTEAAVAEEKSNDMK 359
>At1g15200.1 68414.m01817 protein-protein interaction regulator
family protein contains Pfam PF04696: pinin/SDK/memA/
protein conserved region
Length = 423
Score = 28.3 bits (60), Expect = 7.8
Identities = 32/139 (23%), Positives = 65/139 (46%), Gaps = 5/139 (3%)
Frame = +1
Query: 436 EEKRQRLEE----AEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKE-Q 600
E +R RL+E EK+R+ + + A+K QKK E L ++ ++ + +
Sbjct: 207 ESERLRLQERENLTEKRRRDLTLRARVAAKAE-----QKKLELLFLQWSEHQKKLSNFIR 261
Query: 601 LEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKE 780
+ E +I + +KPL + V++ +++ W+ + E +Y E ++ KE
Sbjct: 262 TKAEPRIYYA-PVKPLEEDTSEVEQQKERTFLEWKAARRQEVSEYQKEIEEQCLGNVEKE 320
Query: 781 LKERQKQQLRHKALKKGLD 837
L+ Q + KA +G++
Sbjct: 321 LERWQNARKARKANNEGMN 339
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.130 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,127,352
Number of Sequences: 28952
Number of extensions: 244069
Number of successful extensions: 1142
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1124
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2256303936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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