Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30033
(558 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 265 2e-71
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 264 3e-71
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 263 6e-71
SB_56| Best HMM Match : Actin (HMM E-Value=0) 263 6e-71
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 263 8e-71
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 261 2e-70
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 236 1e-62
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 2e-18
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 82 3e-16
SB_54| Best HMM Match : Actin (HMM E-Value=0) 76 2e-14
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 65 4e-11
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 36 0.030
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 33 0.21
SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_47898| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 29 2.6
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 29 3.4
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 3.4
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 29 3.4
SB_45775| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 28 4.5
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 28 5.9
SB_25409| Best HMM Match : PSD1 (HMM E-Value=7.2) 27 7.9
SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 265 bits (649), Expect = 2e-71
Identities = 123/135 (91%), Positives = 128/135 (94%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVITIGNERFRCP AL QPSF+GMES GIHET YNSIMKC VDIRKDLYANTVMS
Sbjct: 215 ELPDGQVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVMS 274
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GGTTMYPG+ADRMQKEI+ALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+
Sbjct: 275 GGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 334
Query: 197 EYDESGPGIVXRKCF 153
EYDESGP IV RKCF
Sbjct: 335 EYDESGPAIVHRKCF 349
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 264 bits (648), Expect = 3e-71
Identities = 122/135 (90%), Positives = 128/135 (94%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVITIGNERFRCP A+FQPSF+GMES GIHET YNSIMKC VDIRKDLYANTV+S
Sbjct: 204 ELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS 263
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GGTTMYPGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+
Sbjct: 264 GGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 323
Query: 197 EYDESGPGIVXRKCF 153
EYDESGP IV RKCF
Sbjct: 324 EYDESGPAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 263 bits (645), Expect = 6e-71
Identities = 121/135 (89%), Positives = 128/135 (94%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVITIGNERFRCP A+FQPSF+GMES GIHET YNSIMKC VDIRKDLYANTV+S
Sbjct: 242 ELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS 301
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GG+TMYPGIADRMQKEIT+LAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+
Sbjct: 302 GGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 197 EYDESGPGIVXRKCF 153
EYDESGP IV RKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 263 bits (645), Expect = 6e-71
Identities = 121/135 (89%), Positives = 128/135 (94%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVITIGNERFRCP A+FQPSF+GMES GIHET YNSIMKC VDIRKDLYANTV+S
Sbjct: 241 ELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS 300
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GG+TMYPGIADRMQKEIT+LAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+
Sbjct: 301 GGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360
Query: 197 EYDESGPGIVXRKCF 153
EYDESGP IV RKCF
Sbjct: 361 EYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 263 bits (644), Expect = 8e-71
Identities = 121/135 (89%), Positives = 128/135 (94%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVITIGNERFRCP A+FQPSF+GMES GIHET YNSIMKC VDIRKDLYANTV+S
Sbjct: 242 ELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS 301
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GG+TMYPGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+
Sbjct: 302 GGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 197 EYDESGPGIVXRKCF 153
EYDESGP IV RKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 261 bits (640), Expect = 2e-70
Identities = 120/135 (88%), Positives = 128/135 (94%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVITIGNERFRCP A+FQPSF+GMES GIHET YNSIMKC VDIRKDLYANTV+S
Sbjct: 241 ELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS 300
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GG+TM+PGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+
Sbjct: 301 GGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360
Query: 197 EYDESGPGIVXRKCF 153
EYDESGP IV RKCF
Sbjct: 361 EYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 236 bits (577), Expect = 1e-62
Identities = 106/135 (78%), Positives = 122/135 (90%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVI+IGNERFRCP A+FQP+F+GME+ GIHE +YN IMKC VDIRKDLY+N V+S
Sbjct: 15 ELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIRKDLYSNCVLS 74
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GG+TM+PGIADRMQKEI LA +++K+K+IAPPERKYSVWIGGSILASLSTFQQMWI+KE
Sbjct: 75 GGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLSTFQQMWIAKE 134
Query: 197 EYDESGPGIVXRKCF 153
EY E GP IV RKCF
Sbjct: 135 EYHEYGPPIVHRKCF 149
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 89.0 bits (211), Expect = 2e-18
Identities = 54/154 (35%), Positives = 83/154 (53%), Gaps = 29/154 (18%)
Frame = -2
Query: 554 LPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMSG 375
LPDG+V+ + ERF P ALFQP + +E G+ E ++N+I +D R + Y + V+SG
Sbjct: 246 LPDGRVVKLSGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSG 305
Query: 374 GTTMYPGIADRMQKEITAL---------------------APSTI-----KIKI-IAPP- 279
G+TMYPG+ R+++EI L P T K KI I P
Sbjct: 306 GSTMYPGLPSRLEREIKQLYLERVLKGDTSKLSSGMGMEQIPLTADYLLQKFKIRIEDPP 365
Query: 278 ERKYSVWIGGSILAS-LSTFQQMWISKEEYDESG 180
RK+ V++GG++LA + W++++EY+E G
Sbjct: 366 RRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 81.8 bits (193), Expect = 3e-16
Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 17/145 (11%)
Frame = -2
Query: 536 ITIGNERFRCP*ALFQPSFMGME-SCGIHETVYNSIMKCGVDIRKDLYANTVMSGGTTMY 360
+ + ERF P F P F + + + E V N I C +D+R+ LY N V+SGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 359 PGIADRMQKEIT----------------ALAPSTIKIKIIAPPERKYSVWIGGSILASLS 228
R+Q++I + P I+ ++I+ ++Y+VW GGS+LAS
Sbjct: 256 RDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAVWFGGSMLASTP 315
Query: 227 TFQQMWISKEEYDESGPGIVXRKCF 153
F + +K +YDE GP I F
Sbjct: 316 EFYSVCHTKADYDEHGPSICRHNPF 340
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 75.8 bits (178), Expect = 2e-14
Identities = 33/60 (55%), Positives = 44/60 (73%)
Frame = -2
Query: 554 LPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMSG 375
LPDGQ I IG+ERFR LFQPS +G + GIHE+++ SI KC +D+R +L+ N V+SG
Sbjct: 2287 LPDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIHESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 64.9 bits (151), Expect = 4e-11
Identities = 28/85 (32%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = -2
Query: 476 GMESCGIHETVYNSIMKCGVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 297
G + G+ + V S+ +DIR L+ + +++GG T+ G +R+ +E+ + P ++++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 296 KII---APPERKYSVWIGGSILASL 231
K+I + E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Frame = -2
Query: 470 ESCGIHETVYNSIMKCGVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST----- 306
E + + +S++ C +D RK L N V+ GGT M PG R+ +EI L S
Sbjct: 54 EEKSLATALLDSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDK 113
Query: 305 --IK-IKIIAPP-ERKYSVWIGGSILASLSTFQQMWISKEEYDE 186
IK +K+ PP + W+GG+I SL ++E Y +
Sbjct: 114 LFIKTVKMHQPPVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 35.5 bits (78), Expect = 0.030
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = -2
Query: 458 IHETVYNSIMKCGVDIRKDLYANTVMSGGTTMYPG 354
I E + +I K +D+R+ LY+N V+SGG+T++ G
Sbjct: 257 IIEVLAFAIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 32.7 bits (71), Expect = 0.21
Identities = 23/91 (25%), Positives = 41/91 (45%)
Frame = -1
Query: 510 LSLGSLPAFLHGYGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEG 331
+S+ P + R P+DR + HH RR H +HR H R++R+ +G
Sbjct: 814 MSMAEKPGSQSDNELNRPPQDRHRRHHHRRRHHN----NKHRKHSREHSRRRHQRKHHKG 869
Query: 330 DHRPRALDHQDQDHRSPREEVLRMDRWIHPG 238
+ L+ +D R+E +D +++ G
Sbjct: 870 NDAQETLEEIFED--DARDEKENVDEFVNGG 898
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -1
Query: 486 FLHGYGIVRHP-RDRVQLHHEV-RRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRA 313
F++G G++ H + Q+ E R + G +HRH R +HH ++ R+ + + A
Sbjct: 894 FVNGGGMMEHELQSDSQISQETGARENDPGKKHKHRHRRHHHHRRQHNRKIKKHRRKHSA 953
Query: 312 LDHQ 301
H+
Sbjct: 954 RKHE 957
>SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2126
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 531 HR*REVPLSLGSLPAFLHGYGIVRHPRDRVQLHHEVRRRHP*GP 400
HR P++ LPA H + PR R + + R RHP P
Sbjct: 859 HRINRSPVADDYLPALRHRSSVSPDPRGRPPISPDYRGRHPISP 902
>SB_47898| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
Length = 490
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = -1
Query: 495 LPAFLHGYGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVP----RYRRQDAE 334
+P +H Y +H + ++H R+ H P R HR+ R + +P RY R+DA+
Sbjct: 288 IPTRIHRY-TRKHAKIPTRIHRYTRK-HAKIPTRIHRYTRKHAKIPTRIHRYTRKDAK 343
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = -1
Query: 495 LPAFLHGYGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVP----RYRRQDAE 334
+P +H Y +H + Q+H R+ H P R HR+ R + +P RY R+ A+
Sbjct: 428 IPTRIHRY-TRKHAKIPTQIHRYTRK-HAKIPTRIHRYTRKHAKIPTQIHRYTRKHAK 483
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.7 bits (61), Expect = 3.4
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = -1
Query: 492 PAFLHGYGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVP-RYRRQDAEGDHRPR 316
P +H + V HPR V +H HP V R +H + RQD DH +
Sbjct: 590 PRRVHRHQDVVHPRRDV-VHPRRDVVHPRQDVVHPRQDVDHHRQDVDHHRQDV--DHHRQ 646
Query: 315 ALDHQDQDHRSPREEVL 265
DH QD PR++V+
Sbjct: 647 DADHHRQDVVHPRQDVV 663
Score = 28.3 bits (60), Expect = 4.5
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = -1
Query: 465 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVP-RYRRQDAEGDHRPRALDHQDQD- 292
V HPR V +H HP V HR +H + RQDA DH + + H QD
Sbjct: 606 VVHPRRDV-VHPRQDVVHPRQDVDHHRQDVDHHRQDVDHHRQDA--DHHRQDVVHPRQDV 662
Query: 291 -HRSPREEVLRMDRWIHPGFPVHLPADVD 208
HR + R D H VH D D
Sbjct: 663 VHRRQDADHRRQDADHHRQDVVHPRQDAD 691
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 244 MDPPIHTEYFLSGGAMILILMVEGARAVISFCILSAIPGYMV-VPPD 381
+DPP+ +Y L+GG ++ ++ FCI G++V PP+
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCIFQ---GFVVPTPPE 801
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Frame = -1
Query: 459 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--R 286
HP ++ HHE R P H H P ++ E P DH++++
Sbjct: 316 HPPEQ---HHEEEERGVHPPGEHHEEEERGAHPPGQDLEEEERGAHPPGQDHEEEERGAH 372
Query: 285 SPREEVLRMDRWIHP 241
P + +R +HP
Sbjct: 373 PPEQHHEEEERGVHP 387
>SB_45775| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 584
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = -1
Query: 492 PAFLHGYGIVRHP-RDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEG 331
PA HGY V H + +HEV +P P H YH P + G
Sbjct: 421 PAAPHGYHEVPHGYHEAPHGYHEVPHGYPAAPHGYHEVPHGYHEAPHGYHEKTRG 475
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 4.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 392 NTVMSGGTTMYPGIADRMQKEITALAP 312
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 506 P*ALFQPSFMGMESCGIHETV 444
P +FQPS +G+E GI ET+
Sbjct: 3 PEIIFQPSMLGLEQAGITETM 23
>SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 28.3 bits (60), Expect = 4.5
Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = -1
Query: 462 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYR--RQDAEGDHRPR--ALDHQDQ 295
RH R R + R RH RH H R++ R + R R H+
Sbjct: 23 RHERSRHETRQHERSRHKTSRHESSRHKTSRHERSRHKTSRHETSRHERSRHETRQHERS 82
Query: 294 DHRSPREEVLRMDRWIH 244
H++ R E R ++ H
Sbjct: 83 RHKTSRHETSRHEKSRH 99
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 28.3 bits (60), Expect = 4.5
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = -1
Query: 456 PRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 286
PRDR + E RRR P R+ R + Y PR RR+ R R D R
Sbjct: 854 PRDRRRRSPEHRRRREASPPRRDR--KRYDSPPRRRRRSPSPPPRRRRRDSYSPSRR 908
>SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 395 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 276
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNRLTELGIVKEKIIAPPE 84
>SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/73 (24%), Positives = 27/73 (36%)
Frame = -1
Query: 462 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 283
RH R R + R RH RH H R++ E R+ H+ + H
Sbjct: 63 RHERSRHETRQHERSRHKTSRHESSRHKTSRHGRSRHKTSRHETSRHERS-RHETRQHER 121
Query: 282 PREEVLRMDRWIH 244
R + R ++ H
Sbjct: 122 SRHKTSRHEKSRH 134
>SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Frame = -1
Query: 435 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--RSPREEVLR 262
HHE R P + H H P ++ E P H++++ P E
Sbjct: 154 HHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPEEHHEE 213
Query: 261 MDRWIHP 241
+R +HP
Sbjct: 214 EERGVHP 220
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = -1
Query: 465 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 286
++HP ++ H + ++ P + HHVP + +A G+ R Q+ D+
Sbjct: 550 IQHPVEKAIQHAQEKKYQP----ELEKKTIKSHHVPGQDKTEARGEERIAVWSTQNGDYY 605
Query: 285 SPREE 271
R+E
Sbjct: 606 DQRDE 610
>SB_25409| Best HMM Match : PSD1 (HMM E-Value=7.2)
Length = 889
Score = 27.5 bits (58), Expect = 7.9
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 6/67 (8%)
Frame = -1
Query: 519 EVPLSLGSLPAFLHGYGIVRHPRDRVQLHHEV------RRRHP*GPVRQHRHVRWYHHVP 358
++P P + H RH +R + HE R RH R + H R+ H
Sbjct: 532 DIPTKRTDAPTYRHTDETYRHTHERYRHTHETYRLTHERYRHTNESYR-NTHERYRHTHE 590
Query: 357 RYRRQDA 337
RYRR A
Sbjct: 591 RYRRTQA 597
>SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 395 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 276
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNHLTELGIVKEKIIAPPE 84
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,207,629
Number of Sequences: 59808
Number of extensions: 338309
Number of successful extensions: 1170
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1150
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1300738331
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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