Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30033
(558 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 267 3e-72
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 267 3e-72
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 267 3e-72
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 267 3e-72
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 267 3e-72
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 267 3e-72
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 266 6e-72
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 266 6e-72
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 266 6e-72
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 260 4e-70
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 254 4e-68
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 134 4e-32
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 119 2e-27
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 110 8e-25
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 97 1e-20
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 89 3e-18
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 71 6e-13
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 71 6e-13
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 6e-06
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 29 3.0
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 6.9
Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical pr... 27 9.1
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr... 27 9.1
AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein. 27 9.1
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 267 bits (655), Expect = 3e-72
Identities = 123/135 (91%), Positives = 129/135 (95%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVIT+GNERFRCP ALFQPSF+GMES GIHET YNSIMKC +DIRKDLYANTV+S
Sbjct: 242 ELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 301
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 197 EYDESGPGIVXRKCF 153
EYDESGP IV RKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 267 bits (655), Expect = 3e-72
Identities = 123/135 (91%), Positives = 129/135 (95%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVIT+GNERFRCP ALFQPSF+GMES GIHET YNSIMKC +DIRKDLYANTV+S
Sbjct: 242 ELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 301
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 197 EYDESGPGIVXRKCF 153
EYDESGP IV RKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 267 bits (655), Expect = 3e-72
Identities = 123/135 (91%), Positives = 129/135 (95%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVIT+GNERFRCP ALFQPSF+GMES GIHET YNSIMKC +DIRKDLYANTV+S
Sbjct: 242 ELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 301
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 197 EYDESGPGIVXRKCF 153
EYDESGP IV RKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 267 bits (655), Expect = 3e-72
Identities = 123/135 (91%), Positives = 129/135 (95%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVIT+GNERFRCP ALFQPSF+GMES GIHET YNSIMKC +DIRKDLYANTV+S
Sbjct: 198 ELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 257
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+
Sbjct: 258 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 317
Query: 197 EYDESGPGIVXRKCF 153
EYDESGP IV RKCF
Sbjct: 318 EYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 267 bits (655), Expect = 3e-72
Identities = 123/135 (91%), Positives = 129/135 (95%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVIT+GNERFRCP ALFQPSF+GMES GIHET YNSIMKC +DIRKDLYANTV+S
Sbjct: 228 ELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 287
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+
Sbjct: 288 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 347
Query: 197 EYDESGPGIVXRKCF 153
EYDESGP IV RKCF
Sbjct: 348 EYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 267 bits (655), Expect = 3e-72
Identities = 123/135 (91%), Positives = 129/135 (95%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVIT+GNERFRCP ALFQPSF+GMES GIHET YNSIMKC +DIRKDLYANTV+S
Sbjct: 242 ELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 301
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 197 EYDESGPGIVXRKCF 153
EYDESGP IV RKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 266 bits (653), Expect = 6e-72
Identities = 122/135 (90%), Positives = 129/135 (95%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVIT+GNERFRCP A+FQPSF+GMES GIHET YNSIMKC +DIRKDLYANTV+S
Sbjct: 242 ELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 301
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 197 EYDESGPGIVXRKCF 153
EYDESGP IV RKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 266 bits (653), Expect = 6e-72
Identities = 122/135 (90%), Positives = 129/135 (95%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVIT+GNERFRCP A+FQPSF+GMES GIHET YNSIMKC +DIRKDLYANTV+S
Sbjct: 242 ELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 301
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 197 EYDESGPGIVXRKCF 153
EYDESGP IV RKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 266 bits (653), Expect = 6e-72
Identities = 122/135 (90%), Positives = 129/135 (95%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVIT+GNERFRCP A+FQPSF+GMES GIHET YNSIMKC +DIRKDLYANTV+S
Sbjct: 242 ELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 301
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 197 EYDESGPGIVXRKCF 153
EYDESGP IV RKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 260 bits (638), Expect = 4e-70
Identities = 121/135 (89%), Positives = 128/135 (94%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVIT+GNERFRCP A+FQPSF+GMES GIHET YNSIMKC +DIRKDLYANTV+S
Sbjct: 242 ELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 301
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GGTTMYPGIADRMQKEITALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+
Sbjct: 302 GGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360
Query: 197 EYDESGPGIVXRKCF 153
EYDESGP IV RKCF
Sbjct: 361 EYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 254 bits (621), Expect = 4e-68
Identities = 117/135 (86%), Positives = 124/135 (91%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVITIGNERFRCP LFQP+F+GME GIHET Y SIMKC VDIRKDLYANTV+S
Sbjct: 241 ELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLS 300
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GGT+M+PGIADRMQKEI LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+
Sbjct: 301 GGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360
Query: 197 EYDESGPGIVXRKCF 153
EYDESGP IV RKCF
Sbjct: 361 EYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 134 bits (324), Expect = 4e-32
Identities = 63/134 (47%), Positives = 87/134 (64%)
Frame = -2
Query: 554 LPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMSG 375
LPD I I N FR P LF+P +G E G+ V SIMKC VD+R+ LY+N V+SG
Sbjct: 241 LPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSG 300
Query: 374 GTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 195
GTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+E
Sbjct: 301 GTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKE 360
Query: 194 YDESGPGIVXRKCF 153
Y++ G + ++ F
Sbjct: 361 YEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 119 bits (286), Expect = 2e-27
Identities = 60/138 (43%), Positives = 84/138 (60%), Gaps = 13/138 (9%)
Frame = -2
Query: 554 LPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMSG 375
LPDG+VI +G ERF P LFQP + +E G+ E ++ I +D R D Y + V+SG
Sbjct: 246 LPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSG 305
Query: 374 GTTMYPGIADRMQKEITAL-----------APSTIKIKIIAPPERKYSVWIGGSILASL- 231
GTTMYPG+ R++KE+ L A KI+I APP RK+ V++GG++LA+L
Sbjct: 306 GTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLM 365
Query: 230 -STFQQMWISKEEYDESG 180
Q W+SK+EY+E G
Sbjct: 366 KDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 110 bits (264), Expect = 8e-25
Identities = 56/140 (40%), Positives = 77/140 (55%), Gaps = 8/140 (5%)
Frame = -2
Query: 551 PDGQVITIGNERFRCP*ALFQPSFMGMES-----CGIHETVYNSIMKCGVDIRKDLYANT 387
P+G G ER + P LF ++ E + + S +DIR L++N
Sbjct: 296 PNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLFSNV 355
Query: 386 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP---ERKYSVWIGGSILASLSTFQQ 216
++GG ++ G +R+ + P TIK+++ A P ERKY WIGGSIL SL TFQQ
Sbjct: 356 TVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQ 415
Query: 215 MWISKEEYDESGPGIVXRKC 156
MW+SK EYDESG IV +KC
Sbjct: 416 MWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 96.7 bits (230), Expect = 1e-20
Identities = 39/112 (34%), Positives = 74/112 (66%)
Frame = -2
Query: 530 IGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMSGGTTMYPGI 351
I N RF C LF+P G+++ G+H+ ++ +I++C +D R+ LY N ++GG ++ PGI
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGI 487
Query: 350 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 195
A+++++E++ + P+TI ++ P R + ++G I+AS STF+ IS ++
Sbjct: 488 AEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 88.6 bits (210), Expect = 3e-18
Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 17/139 (12%)
Frame = -2
Query: 536 ITIGNERFRCP*ALFQPSFMGME-SCGIHETVYNSIMKCGVDIRKDLYANTVMSGGTTMY 360
+ +G ERF P F P F E + I +T+ I +C +D+R+ LY N V+SGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 359 PGIADRMQKEITALA----------------PSTIKIKIIAPPERKYSVWIGGSILASLS 228
A ++Q+++ L+ P I +++I+ ++Y+VW GGS+LAS S
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 227 TFQQMWISKEEYDESGPGI 171
F Q+ +K EY E GP I
Sbjct: 396 EFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 70.9 bits (166), Expect = 6e-13
Identities = 37/125 (29%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Frame = -2
Query: 536 ITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMSGGTTMYP 357
I +G ERF P LF PS + ++ CG+ E V SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 356 GIADRMQKEITALAPSTIKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 186
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 185 SGPGI 171
G +
Sbjct: 379 RGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 70.9 bits (166), Expect = 6e-13
Identities = 37/125 (29%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Frame = -2
Query: 536 ITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMSGGTTMYP 357
I +G ERF P LF PS + ++ CG+ E V SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 356 GIADRMQKEITALAPSTIKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 186
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 185 SGPGI 171
G +
Sbjct: 379 RGDSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 6e-06
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Frame = -2
Query: 446 VYNSIMKCGVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL-APSTIKIKIIAP---- 282
++ + KC +D+RK L+ N +++GG + PG+ R+++EI + + KI +I
Sbjct: 194 LHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQF 253
Query: 281 PERK----YSVWIGGSILASL-STFQQMWISKEEY 192
E K + W+G S+L SL T ++ ++ EE+
Sbjct: 254 SEIKNTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -1
Query: 459 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPR 316
HP + HH+ H PV HR R H Q A RPR
Sbjct: 769 HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPR 816
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 360 PRYRRQDAEGDHRPRALDHQDQDHRSPREEVLR 262
P+YRRQ L Q Q HR PRE +L+
Sbjct: 181 PKYRRQVMHCSKSEHKLVLQTQKHRLPRERMLK 213
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/66 (25%), Positives = 21/66 (31%)
Frame = -1
Query: 435 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMD 256
HH H G H H HH P + E H P H + H +P +
Sbjct: 432 HHHAPAHH--GHHESHGHG---HHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGE 486
Query: 255 RWIHPG 238
H G
Sbjct: 487 HGTHHG 492
>Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical
protein K10D3.2 protein.
Length = 665
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 318 RALDHQDQDHRSPREEVLRMDRW 250
R +D D + R EE++R DRW
Sbjct: 134 RFVDVNDNEIREANEEIIRKDRW 156
>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical protein
T23F2.2b protein.
Length = 1538
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 154 KHLRXTMPGPDSSYSSFEIHICWKV 228
K L +P D+ Y I +CWKV
Sbjct: 1359 KALENDLPDGDTDYDRRNIRVCWKV 1383
>AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein.
Length = 665
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 318 RALDHQDQDHRSPREEVLRMDRW 250
R +D D + R EE++R DRW
Sbjct: 134 RFVDVNDNEIREANEEIIRKDRW 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,494,334
Number of Sequences: 27780
Number of extensions: 229611
Number of successful extensions: 721
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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