Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30033
(558 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 249 8e-67
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 249 8e-67
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 248 1e-66
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 248 3e-66
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 248 3e-66
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 246 6e-66
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 241 2e-64
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 241 2e-64
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 228 2e-60
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 219 1e-57
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 209 1e-54
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 190 7e-49
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 130 6e-31
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 116 8e-27
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 105 3e-23
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 97 7e-21
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 71 7e-13
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 66 1e-11
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 66 2e-11
At5g43500.2 68418.m05318 expressed protein 48 3e-06
At5g43500.1 68418.m05319 expressed protein 48 3e-06
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 34 0.074
At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel... 29 2.1
At2g36010.3 68415.m04422 E2F transcription factor-3 (E2F3) ident... 29 2.1
At2g36010.1 68415.m04420 E2F transcription factor-3 (E2F3) ident... 29 2.1
At1g53510.1 68414.m06068 mitogen-activated protein kinase, putat... 29 2.1
At2g46440.1 68415.m05779 cyclic nucleotide-regulated ion channel... 28 3.7
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 27 6.4
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 27 6.4
At3g24210.1 68416.m03038 ankyrin repeat family protein contains ... 27 6.4
At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family... 27 8.5
At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family... 27 8.5
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 249 bits (610), Expect = 8e-67
Identities = 114/135 (84%), Positives = 123/135 (91%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVITIG ERFRCP LFQPSF+GME+ GIHET YNSIMKC VDIRKDLY N V+S
Sbjct: 243 ELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 303 GGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKA 362
Query: 197 EYDESGPGIVXRKCF 153
EYDE+GPGIV RKCF
Sbjct: 363 EYDEAGPGIVHRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 249 bits (610), Expect = 8e-67
Identities = 114/135 (84%), Positives = 123/135 (91%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVITIG ERFRCP LFQPSF+GME+ GIHET YNSIMKC VDIRKDLY N V+S
Sbjct: 243 ELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 303 GGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKA 362
Query: 197 EYDESGPGIVXRKCF 153
EYDE+GPGIV RKCF
Sbjct: 363 EYDEAGPGIVHRKCF 377
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 248 bits (608), Expect = 1e-66
Identities = 113/135 (83%), Positives = 122/135 (90%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVITIG ERFRCP LFQPS +GME+ GIHET YNSIMKC VDIRKDLY N V+S
Sbjct: 243 ELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K
Sbjct: 303 GGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
Query: 197 EYDESGPGIVXRKCF 153
EYDESGP IV RKCF
Sbjct: 363 EYDESGPSIVHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 248 bits (606), Expect = 3e-66
Identities = 112/135 (82%), Positives = 123/135 (91%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVITIG+ERFRCP L+QPS +GME+ GIHET YNSIMKC VDIRKDLY N V+S
Sbjct: 243 ELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K
Sbjct: 303 GGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
Query: 197 EYDESGPGIVXRKCF 153
EYDESGP IV RKCF
Sbjct: 363 EYDESGPSIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 248 bits (606), Expect = 3e-66
Identities = 112/135 (82%), Positives = 123/135 (91%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVITIG+ERFRCP L+QPS +GME+ GIHET YNSIMKC VDIRKDLY N V+S
Sbjct: 243 ELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K
Sbjct: 303 GGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
Query: 197 EYDESGPGIVXRKCF 153
EYDESGP IV RKCF
Sbjct: 363 EYDESGPSIVHRKCF 377
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 246 bits (603), Expect = 6e-66
Identities = 113/135 (83%), Positives = 122/135 (90%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVITIG ERFRCP LFQPS +GME+ GIHET YNSIMKC VDIRKDLY N V+S
Sbjct: 243 ELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GG+TM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 303 GGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKS 362
Query: 197 EYDESGPGIVXRKCF 153
EYDESGP IV RKCF
Sbjct: 363 EYDESGPSIVHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 241 bits (590), Expect = 2e-64
Identities = 111/135 (82%), Positives = 120/135 (88%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVITIG ERFRCP LFQPS +GME+ GIHET YNSIMKC VDIRKDLY N V+S
Sbjct: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GGTTM+ GI DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K
Sbjct: 303 GGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
Query: 197 EYDESGPGIVXRKCF 153
EYDESGP IV RKCF
Sbjct: 363 EYDESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 241 bits (590), Expect = 2e-64
Identities = 111/135 (82%), Positives = 120/135 (88%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVITIG ERFRCP LFQPS +GME+ GIHET YNSIMKC VDIRKDLY N V+S
Sbjct: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GGTTM+ GI DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K
Sbjct: 303 GGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
Query: 197 EYDESGPGIVXRKCF 153
EYDESGP IV RKCF
Sbjct: 363 EYDESGPSIVHRKCF 377
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 228 bits (557), Expect = 2e-60
Identities = 104/135 (77%), Positives = 115/135 (85%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVITIG ERFRCP LFQ S +GME+ GIHET YNSIMKC VDIRKDLY N V+S
Sbjct: 244 ELPDGQVITIGAERFRCPEVLFQTSLIGMETSGIHETTYNSIMKCDVDIRKDLYGNIVLS 303
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GGTTM+PGIADRM KEI ALAP ++KIK++APPERKYSVW+GGSILASLS+F MWI+K
Sbjct: 304 GGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVGGSILASLSSFAPMWITKA 363
Query: 197 EYDESGPGIVXRKCF 153
EYDE G IV RKCF
Sbjct: 364 EYDEQGGAIVHRKCF 378
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 219 bits (535), Expect = 1e-57
Identities = 100/135 (74%), Positives = 114/135 (84%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVITIG ERFRCP LFQPS +GME+ GIHE YNSIMKC DIRKDLY N V+S
Sbjct: 195 ELPDGQVITIGAERFRCPEVLFQPSLIGMETSGIHEKTYNSIMKCDDDIRKDLYGNIVLS 254
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 198
GGTTM+ GI +RM KEI ALA + ++IKI+APPERKYSVWIGGSILASLST++QMWI+K
Sbjct: 255 GGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIGGSILASLSTYEQMWITKA 314
Query: 197 EYDESGPGIVXRKCF 153
EY+E+GP IV KCF
Sbjct: 315 EYEENGPAIVHTKCF 329
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 209 bits (510), Expect = 1e-54
Identities = 97/119 (81%), Positives = 107/119 (89%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMS 378
ELPDGQVITIG ERFRCP LFQPSF+GME+ GIHET YNSIMKC VDIRKDLY N V+S
Sbjct: 243 ELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
Query: 377 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 201
GGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQ+ I +
Sbjct: 303 GGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVKIDQ 361
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 190 bits (462), Expect = 7e-49
Identities = 86/133 (64%), Positives = 103/133 (77%)
Frame = -2
Query: 554 LPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMSG 375
LPDGQ ITI ERF CP LFQPS +G ES GIHE NSI+KC VD R+D+Y N +M+G
Sbjct: 233 LPDGQEITIEAERFMCPEVLFQPSVIGKESSGIHEATRNSILKCPVDTRRDMYGNILMTG 292
Query: 374 GTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 195
GTTM GI +RM KE+ AL PS++K+K++ PPE + SVWIGGSILASLSTF QMWI+K+E
Sbjct: 293 GTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQMWITKDE 352
Query: 194 YDESGPGIVXRKC 156
Y+E G IV RKC
Sbjct: 353 YEEHGAAIVHRKC 365
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 130 bits (314), Expect = 6e-31
Identities = 65/149 (43%), Positives = 96/149 (64%), Gaps = 15/149 (10%)
Frame = -2
Query: 557 ELPDGQVITIGNERFRCP*ALFQPSFM----GMESC--------GIHETVYNSIMKCGVD 414
ELPDGQ + IG +RF+ P +F PS + GME G+ V SI KC VD
Sbjct: 292 ELPDGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCDVD 351
Query: 413 IRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAP---PERKYSVWIGGSI 243
IR++LY++ +++GGT+ + +R++K++ +P + ++K++A ER++SVWIGGSI
Sbjct: 352 IRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSI 411
Query: 242 LASLSTFQQMWISKEEYDESGPGIVXRKC 156
LASL +FQQMW SK EY+E G + RKC
Sbjct: 412 LASLGSFQQMWFSKSEYEEHGASYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 116 bits (280), Expect = 8e-27
Identities = 62/140 (44%), Positives = 81/140 (57%), Gaps = 6/140 (4%)
Frame = -2
Query: 554 LPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMSG 375
LPDGQVI+IG ER+ ALFQPS +G+E GI E + I + + L NTV+ G
Sbjct: 225 LPDGQVISIGRERYSVGEALFQPSILGLEEHGIVEQLVRIISTVSSENHRQLLENTVLCG 284
Query: 374 GTTMYPGIADRMQKEITALAPSTIKIKIIAPPE------RKYSVWIGGSILASLSTFQQM 213
GTT G R QKE L S I+ ++ PPE YS W+GG+ILA + Q
Sbjct: 285 GTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKVVFPQNQ 343
Query: 212 WISKEEYDESGPGIVXRKCF 153
++K +YDE+GP +V RKCF
Sbjct: 344 HVTKADYDETGPSVVHRKCF 363
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 105 bits (251), Expect = 3e-23
Identities = 54/137 (39%), Positives = 85/137 (62%), Gaps = 12/137 (8%)
Frame = -2
Query: 554 LPDGQVITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMSG 375
LPDG+VI +G ERF+ P ALF P + +E G+ + V+ I + +D R LY + V+SG
Sbjct: 243 LPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSG 302
Query: 374 GTTMYPGIADRMQKEI------TALAPS-----TIKIKIIAPPERKYSVWIGGSILAS-L 231
G+TMYPG+ R++KEI T L + ++++I PP RK+ V++GG++LA +
Sbjct: 303 GSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIM 362
Query: 230 STFQQMWISKEEYDESG 180
+ WI++E+Y E G
Sbjct: 363 KDAPEFWINREDYMEEG 379
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 97.1 bits (231), Expect = 7e-21
Identities = 45/128 (35%), Positives = 73/128 (57%)
Frame = -2
Query: 536 ITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVDIRKDLYANTVMSGGTTMYP 357
I + NERF P LFQP+ +GM G+ E + +I C ++ LY + +++GG+T++P
Sbjct: 293 IDLTNERFLVPETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFP 352
Query: 356 GIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGP 177
+ +R++ E+ L P +KI + VW GGS+LAS F+ M ++K EY+E G
Sbjct: 353 QLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEYEELGS 412
Query: 176 GIVXRKCF 153
R+ F
Sbjct: 413 ARCRRRFF 420
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 70.5 bits (165), Expect = 7e-13
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 3/122 (2%)
Frame = -2
Query: 536 ITIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKCGVD---IRKDLYANTVMSGGTT 366
I IG ERFRCP LF P+ +G++ G+ E SI + D + + L ++ +M+GG +
Sbjct: 589 IVIGIERFRCPEILFHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCS 648
Query: 365 MYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 186
+ PG+ +R++ I + P I ++ + W G S A+ F +K +YDE
Sbjct: 649 LLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNFLGNAFTKMDYDE 708
Query: 185 SG 180
G
Sbjct: 709 KG 710
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 66.1 bits (154), Expect = 1e-11
Identities = 35/120 (29%), Positives = 66/120 (55%), Gaps = 6/120 (5%)
Frame = -2
Query: 533 TIGNERFRCP*ALFQPSFMGMESCGIHETVYNSIMKC---GVDIRKDLYANTVMSGGTTM 363
T+ ERF+ LFQP GM + +H+ V + C G+ + V++GG+
Sbjct: 344 TLSKERFQTGEILFQPRLAGMRAMSLHQAVSLCMDHCDAAGLTGDDSWFKTVVLTGGSAC 403
Query: 362 YPGIADRMQKEITALAPSTIK--IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKEEY 192
PG+++R+++E+ PS+I I++I PP + W G ++++LS F W I+++++
Sbjct: 404 LPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGPWCITRKQF 463
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 65.7 bits (153), Expect = 2e-11
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 17/137 (12%)
Frame = -2
Query: 530 IGNERFRCP*ALFQPSFMGME-SCGIHETVYNSIMKCGVDIRKDLYANTVMSGGTTMYPG 354
+G ERF P F P + + + + I +D R+ LY N V+SGG+TM+
Sbjct: 280 VGYERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKD 339
Query: 353 IADRMQKEITALAPS----------------TIKIKIIAPPERKYSVWIGGSILASLSTF 222
R+Q+++ + + +++ +++ P ++++VW GGS+L+S F
Sbjct: 340 FGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQRFAVWFGGSVLSSTPEF 399
Query: 221 QQMWISKEEYDESGPGI 171
+KEEY+E G I
Sbjct: 400 FASCRTKEEYEEYGASI 416
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 48.4 bits (110), Expect = 3e-06
Identities = 25/102 (24%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Frame = -2
Query: 470 ESCGIHETVYNSIMKCG-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 294
E G+ E + +SI+ G +D+R+ L+++ + GG + G+ +++ + P T I
Sbjct: 458 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 517
Query: 293 II----APPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 180
+ + E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 518 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 48.4 bits (110), Expect = 3e-06
Identities = 25/102 (24%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Frame = -2
Query: 470 ESCGIHETVYNSIMKCG-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 294
E G+ E + +SI+ G +D+R+ L+++ + GG + G+ +++ + P T I
Sbjct: 470 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 529
Query: 293 II----APPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 180
+ + E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 530 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 571
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 33.9 bits (74), Expect = 0.074
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = -2
Query: 458 IHETVYNSIMKCGVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 279
I E +Y I++ + KD Y N+ G + +YP ++K+ L ++ K + PP
Sbjct: 336 IRELIYREILEYHPQLLKD-YMNS--EGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPP 392
Query: 278 ERKYS 264
+RK++
Sbjct: 393 DRKHA 397
>At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC3) identical to
cyclic nucleotide and calmodulin-regulated ion channel
GI:4581201 from [Arabidopsis thaliana]
Length = 706
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 343 LSAIPGYMVVPPDMTVLA--YRSLRMSTPHFMMELYTVSWMPHDSIPMKEGWKR 498
L+ + G+++ D+ +A YR L M Y+V W + ++ WKR
Sbjct: 571 LTEVEGFLLSADDLKFVATQYRRLHSKQLRHMFRFYSVQWQTWAACFIQAAWKR 624
>At2g36010.3 68415.m04422 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 485
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1
Query: 543 SGDHHR*REVPLSLGSLPAFLHGYGIVRHPRDRVQLHHEVRRR 415
S D+HR LS + +F+HG G+V D V + R+R
Sbjct: 54 SDDYHRFNPSSLSNNNDRSFVHGCGVVDREEDAVVVRSPSRKR 96
>At2g36010.1 68415.m04420 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 483
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1
Query: 543 SGDHHR*REVPLSLGSLPAFLHGYGIVRHPRDRVQLHHEVRRR 415
S D+HR LS + +F+HG G+V D V + R+R
Sbjct: 54 SDDYHRFNPSSLSNNNDRSFVHGCGVVDREEDAVVVRSPSRKR 96
>At1g53510.1 68414.m06068 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK18) mitogen-activated protein
kinase (MAPK)(AtMPK18), PMID:12119167
Length = 603
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = -2
Query: 458 IHETVYNSIMKCGVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 279
I E +Y I++ + KD + + G +YP ++++ T L ++ + + P
Sbjct: 336 IRELIYREILEYHPQLLKDYMSGS--EGSNFVYPSAIGHLRQQFTYLEENSSRNGPVIPL 393
Query: 278 ERKYS 264
ERK++
Sbjct: 394 ERKHA 398
>At2g46440.1 68415.m05779 cyclic nucleotide-regulated ion channel,
putative (CNGC11) similar to cyclic nucleotide and
calmodulin-regulated ion channel (cngc3) GI:4581201 from
[Arabidopsis thaliana]
Length = 588
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 343 LSAIPGYMVVPPDMTVLA--YRSLRMSTPHFMMELYTVSWMPHDSIPMKEGWKR 498
L+ + G+++ D+ +A YR L M Y++ W + ++ WKR
Sbjct: 496 LTEVEGFVISADDLKFVATQYRRLHSKQLQHMFRFYSLQWQTWAACFIQAAWKR 549
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 27.5 bits (58), Expect = 6.4
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = -1
Query: 462 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH-QDQDH 289
RH RD+ + + +HRH + Y D EG+HR R+ H +D D+
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHSKDVDY 730
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 27.5 bits (58), Expect = 6.4
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = -1
Query: 462 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH-QDQDH 289
RH RD+ + + +HRH + Y D EG+HR R+ H +D D+
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHSKDVDY 730
>At3g24210.1 68416.m03038 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 607
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 342 DAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFPV 229
D E +P+AL H S ++ LR W+ P FP+
Sbjct: 423 DNEHYRKPKALVSDKTRHESEYKKGLRPVLWLSPNFPL 460
>At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 515
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -2
Query: 386 VMSGGTTMYPGIADRMQKEITALAPSTIKIKII 288
+ G + +Y G+ D QK I + T+ KI+
Sbjct: 209 INGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 241
>At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 722
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -2
Query: 386 VMSGGTTMYPGIADRMQKEITALAPSTIKIKII 288
+ G + +Y G+ D QK I + T+ KI+
Sbjct: 416 INGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 448
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,042,711
Number of Sequences: 28952
Number of extensions: 219664
Number of successful extensions: 698
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1062855648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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