Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30028
(929 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 306 3e-84
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 272 5e-74
SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr... 228 1e-60
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 223 3e-59
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 165 8e-42
SPCC1322.02 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 30 0.40
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 29 1.2
SPAC23H3.10 |ssr2||SWI/SNF and RSC complex subunit Ssr2|Schizosa... 28 1.6
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 28 2.2
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 27 5.0
SPCC4E9.01c |rec11|SPCC550.16c|meiotic cohesin complex subunit R... 27 5.0
SPAC13G7.07 |arb2||argonaute binding protein 2|Schizosaccharomyc... 27 5.0
SPBPB21E7.07 |aes1|SPAPB21E7.07, SPAPB21E7.07|enhancer of RNA-me... 26 6.6
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 6.6
SPAC23C11.02c |rps23||40S ribosomal protein S23|Schizosaccharomy... 26 8.7
SPBP4H10.13 |rps2302|rps23-2|40S ribosomal protein S23|Schizosac... 26 8.7
SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14 |Schizo... 26 8.7
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 306 bits (751), Expect = 3e-84
Identities = 151/309 (48%), Positives = 211/309 (68%)
Frame = +1
Query: 1 KKVIAYFATVGASQKKDPSQEKKGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRI 180
K++I Y A + +S SQ +E+Q+++TNPVLE+FGNA+TVRN+NSSRFGKFI++
Sbjct: 181 KRIIQYLAAIASSTTVGSSQ-----VEEQIIKTNPVLESFGNARTVRNNNSSRFGKFIKV 235
Query: 181 HFGPSGKLAGADIETYLLEKARVISQQALERSYHIFYQMMSGSVNGLKAICLLSNDVMDY 360
F SG+++ A IE YLLEK+RV+ Q ER+YH+FYQ++SG+ LK LL+++ DY
Sbjct: 236 EFSLSGEISNAAIEWYLLEKSRVVHQNEFERNYHVFYQLLSGADTALKNKLLLTDNCNDY 295
Query: 361 NIVSQGKTVIPGVDDGEEMRITDQAFDILGFTQEEKDNVYKITAAVMHMGCMKFKQRGRE 540
+ +I GVDD EE + AF LGF +E +++ I + ++HMG + R
Sbjct: 296 RYLKDSVHIIDGVDDKEEFKTLLAAFKTLGFDDKENFDLFNILSIILHMGNIDV-GADRS 354
Query: 541 EQAEADGTEDGDKVAKLLGVDCADLYKNLLKPRIKVGNEFVTQGRNKDQVINSVGALCKG 720
A ++ DK+ LLGV +NL++PRIK G+E+V R++ QVI+S+ AL K
Sbjct: 355 GIARLLNPDEIDKLCHLLGVSPELFSQNLVRPRIKAGHEWVISARSQTQVISSIEALAKA 414
Query: 721 IFDRLFKWLVKKCNETLDTKQKRQHFIGVLDIAGFEIFDFNGFEQLCINFTNEKLQQFFN 900
I++R F WLVK+ N +L+ + +FIG+LDIAGFEIF+ N FEQLCIN+TNEKLQQFFN
Sbjct: 415 IYERNFGWLVKRLNTSLNHSNAQSYFIGILDIAGFEIFEKNSFEQLCINYTNEKLQQFFN 474
Query: 901 HHMFVLEQE 927
HHMFVLEQE
Sbjct: 475 HHMFVLEQE 483
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 272 bits (667), Expect = 5e-74
Identities = 142/310 (45%), Positives = 196/310 (63%), Gaps = 1/310 (0%)
Frame = +1
Query: 1 KKVIAYFATVGASQKKDPSQEKKGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRI 180
KKVI Y +V + D Q LE ++++TNPVLEAFGNA+TVRN+NSSRFGKFIRI
Sbjct: 193 KKVIQYLTSVTDASTSDSQQ-----LEKKILETNPVLEAFGNAQTVRNNNSSRFGKFIRI 247
Query: 181 HFGPSGKLAGADIETYLLEKARVISQQALERSYHIFYQMMSGSVNGLKAICLLSNDVMDY 360
F +G + GA+++ YLLEK+RVI + ER+YH+FYQ++ G+ L L V Y
Sbjct: 248 EFSNNGSIVGANLDWYLLEKSRVIHPSSNERNYHVFYQLLRGADGSLLESLFLDRYVDHY 307
Query: 361 NIVSQGKTVIPGVDDGEEMRITDQAFDILGFTQEEKDNVYKITAAVMHMGCMKFKQRGRE 540
+ + G I GVDDG+E + LGF E +++ I A+++H+G ++ R
Sbjct: 308 SYLKNGLKHINGVDDGKEFQKLCFGLRTLGFDNNEIHSLFLIIASILHIGNIEVAS-DRS 366
Query: 541 EQAEADGTEDGDKVAKLLGVDCADLYKNLLKPRIKVGNEFVTQGRNKDQVINSVGALCKG 720
QA D++ LL + L P+ K G E++ R ++QV++++ +L KG
Sbjct: 367 GQARFPSLTQIDQLCHLLEIPVDGFVNAALHPKSKAGREWIVTARTREQVVHTLQSLAKG 426
Query: 721 IFDRLFKWLVKKCNETLDTKQ-KRQHFIGVLDIAGFEIFDFNGFEQLCINFTNEKLQQFF 897
+++R F LVK+ N+T+ Q + FIGVLDIAGFEIF FN FEQLCINFTNEKLQQFF
Sbjct: 427 LYERNFAHLVKRLNQTMYYSQSEHDGFIGVLDIAGFEIFTFNSFEQLCINFTNEKLQQFF 486
Query: 898 NHHMFVLEQE 927
NH+MFVLEQE
Sbjct: 487 NHYMFVLEQE 496
>SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1471
Score = 228 bits (557), Expect = 1e-60
Identities = 125/313 (39%), Positives = 189/313 (60%), Gaps = 4/313 (1%)
Frame = +1
Query: 1 KKVIAYFATVGASQKKDPSQEKKGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRI 180
K ++ Y +V Q D + K S+E+QV+ TNP++EAFGNAKT+RNDNSSRFGK++ I
Sbjct: 170 KYIMRYLTSV---QGVDHNGVVKRSVENQVLATNPIMEAFGNAKTIRNDNSSRFGKYVTI 226
Query: 181 HFGPSGKLAGADIETYLLEKARVISQQALERSYHIFYQMMSGSVNGLKAICLLSNDVMDY 360
F + + GA++ TYLLE++RV+S ER+YHIFYQ+++G + L + +
Sbjct: 227 SFDENLLITGANVNTYLLERSRVVSLLKGERNYHIFYQLITGCTEEQRDKWFLES-ASSF 285
Query: 361 NIVSQGK-TVIPGVDDGEEMRITDQAFDILGFTQEEKDNVYKITAAVMHMGCMKFKQRGR 537
N +SQG I GVDD + IT +A +G ++ +++V+ + AA++H+G ++
Sbjct: 286 NYLSQGNCDEISGVDDSNDFTITCRALSTIGISESRQEDVFCLLAALLHLGNIEVCATRN 345
Query: 538 EEQAEADGTEDGDKVAKLLGVDCADLYKNLLKPRIKVGNEFVTQGRNKDQVINSVGALCK 717
E Q + G K A LLGVD + L K ++K ++K +E + + I+ ++ K
Sbjct: 346 EAQIQ-PGDGYLQKAALLLGVDSSTLAKWIVKRQLKTRSETIITSSTLEHAISIRDSVAK 404
Query: 718 GIFDRLFKWLVKKCNETLD---TKQKRQHFIGVLDIAGFEIFDFNGFEQLCINFTNEKLQ 888
++ LF W+V N +LD K+ +IGV+DI GFE F+ N EQ CIN+ NEKLQ
Sbjct: 405 YLYSALFLWIVHMINASLDHNKVKRAAYKYIGVVDIYGFEHFEKNSMEQFCINYANEKLQ 464
Query: 889 QFFNHHMFVLEQE 927
Q FN H+F LEQE
Sbjct: 465 QEFNKHVFKLEQE 477
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 223 bits (545), Expect = 3e-59
Identities = 125/317 (39%), Positives = 191/317 (60%), Gaps = 10/317 (3%)
Frame = +1
Query: 7 VIAYFATVGAS-QKKDPSQEKKGSL---EDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFI 174
++ YFA+V A Q D + + L E++++ TNP++EAFGN+KT RNDNSSRFGK+I
Sbjct: 180 IMRYFASVQALIQSTDSNFHEAPQLTAVENEILATNPIMEAFGNSKTSRNDNSSRFGKYI 239
Query: 175 RIHFGPSGKLAGADIETYLLEKARVISQQALERSYHIFYQMMSGSVNGLKAICLLSNDVM 354
+I F + + GA I+TYLLE++R++ Q ER+YHIFYQ+++GS + L +
Sbjct: 240 QILFDGNATIIGAKIQTYLLERSRLVFQPNQERNYHIFYQILAGSSSEQLEKWKLVENSQ 299
Query: 355 DYNIVSQGK-TVIPGVDDGEEMRITDQAFDILGFTQEEKDNVYKITAAVMHMGCMKFKQR 531
++N + QG + I GV+D EE + T A +G + + ++ + AA++H+G ++ K
Sbjct: 300 EFNYLKQGNCSTIEGVNDKEEFKATVDALKTVGIDNDTCECIFSLLAALLHIGNIEVKHS 359
Query: 532 GREEQAEADGTEDGDKVAKLLGVDCADLYKNLLKPRIKVGNEFVTQGRNKDQVINSVGAL 711
+ ++ E+ LLGVD + L K L K +IK+ +E + + N+ Q + + ++
Sbjct: 360 RNDAYIDSK-NENLINATSLLGVDPSSLVKWLTKRKIKMASEGILKPLNEFQAVVARDSV 418
Query: 712 CKGIFDRLFKWLVKKCNETL-----DTKQKRQHFIGVLDIAGFEIFDFNGFEQLCINFTN 876
K ++ LF WLV N+ L + Q + FIGVLDI GFE F N FEQ CIN+ N
Sbjct: 419 AKFLYASLFDWLVATINKALMYSADKSNQTAKSFIGVLDIYGFEHFKKNSFEQFCINYAN 478
Query: 877 EKLQQFFNHHMFVLEQE 927
EKLQQ F H+F LEQE
Sbjct: 479 EKLQQEFYRHVFKLEQE 495
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 165 bits (401), Expect = 8e-42
Identities = 99/288 (34%), Positives = 158/288 (54%), Gaps = 8/288 (2%)
Frame = +1
Query: 88 VVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPSGKLAGADIETYLLEKARVISQQAL 267
++ TNP+LE+FG AKT+RN+NSSR GK++ + F G GA I YLLEK R+++Q
Sbjct: 168 ILATNPLLESFGCAKTLRNNNSSRHGKYLEMIFNSGGVPVGAKITNYLLEKNRIVNQVRN 227
Query: 268 ERSYHIFYQMMSGSVNGLKAICLLSNDVMDYNIVSQGKTV-IPGVDDGEEMRITDQAFDI 444
ER++HIFYQ + + + +Y S + + + G+ D ++ + T A +
Sbjct: 228 ERNFHIFYQFTKSAPQKYRDTYGIQGP-ENYVYTSACQCLSVDGISDEKDFQGTMNAMKV 286
Query: 445 LGFTQEEKDNVYKITAAVMHMGCMKFKQRGREEQAEADGTEDGDKVAKLLGVDCADLYKN 624
+G T+ E+D ++++ + ++ +G ++F Q G++ + + + L+GV A + +
Sbjct: 287 IGITEPEQDEIFRMLSIILWLGNIQF-QEGQDGGSVISDKSITEFLGYLIGVPVAAI-ER 344
Query: 625 LLKPRIKVGNEFVTQGR------NKDQVINSVGALCKGIFDRLFKWLVKKCNETLDTKQK 786
L RI +G N Q + AL I++ LF W+V++ N+ L T
Sbjct: 345 ALTIRIMQTQHGARRGSVYEVPLNPTQALAVRDALSMAIYNCLFDWIVERVNKALVTSDN 404
Query: 787 R-QHFIGVLDIAGFEIFDFNGFEQLCINFTNEKLQQFFNHHMFVLEQE 927
+ IG+LDI GFEIF+ N FEQLCIN+ NEKLQQ F EQE
Sbjct: 405 SVSNSIGILDIYGFEIFENNSFEQLCINYVNEKLQQIFIELTLKTEQE 452
>SPCC1322.02 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 351
Score = 30.3 bits (65), Expect = 0.40
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +1
Query: 298 MSGSVNGLKAICLLSNDVMDYNIVSQGK----TVIPGVDDGEEMRITDQAFDILGFTQEE 465
+SG +N L+ +C +D Y+I G +V P D GEE T ++ I+ +E
Sbjct: 215 ISGELNMLRGVCTRIDDDNRYDIEQAGSCFGMSVFPTSDSGEESFTTLESDPIVNCEHDE 274
Query: 466 K 468
K
Sbjct: 275 K 275
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 337 LSNDVMDYNIVSQGKTVIPGVDDGEEMRITDQAFDILGFTQEEKDNVY 480
L ++ +DY S+ + V DDGE++ D+ D E+ DN +
Sbjct: 333 LEDEDIDYTYDSEAEWVADEEDDGEDLESEDEEVDNSDDIVEDGDNAF 380
>SPAC23H3.10 |ssr2||SWI/SNF and RSC complex subunit
Ssr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 503
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +1
Query: 535 REEQAEADGTEDGDKVAKLLGVDCADL-YKNLLKPRIKVGNEFVTQGRNKDQVINSVGAL 711
+EE ++D DKV GV+C+ Y NL + + QGR NS L
Sbjct: 177 KEEDEKSDKVPRVDKVCFTCGVNCSQTWYHNLKNKKYDICPNCYKQGRFSSS-FNSSDFL 235
Query: 712 CKGIFD 729
C D
Sbjct: 236 CMDAID 241
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 27.9 bits (59), Expect = 2.2
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = -3
Query: 330 DGFKTVDGAGHHLVEDVVRTLKSLLGDDTSL----LKQIGFDVSTSQFSGWTEMDT 175
D FK VDG+ L + TL S+L + S+ KQ+GF S+F ++ DT
Sbjct: 1048 DNFKLVDGSITALQRKNLYTLSSILSEIFSIESCDSKQLGFFRPLSEFIEVSKQDT 1103
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 25 TVGASQKKDPSQEKKGSLEDQVVQTNPVLEA 117
T KK+PS+EKK + D+ + P+ E+
Sbjct: 504 TFSEDVKKEPSEEKKLEVSDEAPKAAPLAES 534
>SPCC4E9.01c |rec11|SPCC550.16c|meiotic cohesin complex subunit
Rec11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 923
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 773 SRVSLHFLTSHLKRRSKIPLQRAPTELM 690
S + LH+ +H+ +RSK P +R E++
Sbjct: 571 SSIYLHYFATHISKRSKKPGKRLEDEVV 598
>SPAC13G7.07 |arb2||argonaute binding protein 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 266
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -1
Query: 785 FCLVSRVSLHFLTSHLKRRSKIPLQRAPTELMTW-SLLRPWVTN 657
F ++ V L + L R IPL+ +P+E +W R W TN
Sbjct: 59 FAVLDHVYSWTLQNSLLTRISIPLESSPSEPHSWIYATRNWQTN 102
>SPBPB21E7.07 |aes1|SPAPB21E7.07, SPAPB21E7.07|enhancer of
RNA-mediated gene silencing |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 296
Score = 26.2 bits (55), Expect = 6.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 218 MSAPASFPDGPKWIRMNLPKREEL 147
+S P DGPKW+ + LP ++
Sbjct: 156 VSPPVLIDDGPKWLVIQLPNATDV 179
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 754 KCNETLDTKQKRQHFIGVLDIAGFEIFDF 840
KC + D R+H V D+ G+ +FDF
Sbjct: 423 KCIQLRDYFDYRKHICIVTDLFGWSVFDF 451
>SPAC23C11.02c |rps23||40S ribosomal protein S23|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 25.8 bits (54), Expect = 8.7
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Frame = +1
Query: 472 NVYKITAAVMHMGCMKFKQR---------GREEQAEADGTEDGDKVAKLLGVDCADLY-K 621
N K+TA V H GC+ F GR+ +A+ D KV K+ GV + L+ +
Sbjct: 77 NGKKVTAFVPHDGCLNFVDENDEVLLSGFGRKGKAKGDIPGVRFKVVKVAGVGLSALFHE 136
Query: 622 NLLKPR 639
KPR
Sbjct: 137 KKEKPR 142
>SPBP4H10.13 |rps2302|rps23-2|40S ribosomal protein
S23|Schizosaccharomyces pombe|chr 2|||Manual
Length = 143
Score = 25.8 bits (54), Expect = 8.7
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Frame = +1
Query: 472 NVYKITAAVMHMGCMKFKQR---------GREEQAEADGTEDGDKVAKLLGVDCADLY-K 621
N K+TA V H GC+ F GR+ +A+ D KV K+ GV + L+ +
Sbjct: 77 NGKKVTAFVPHDGCLNFVDENDEVLLSGFGRKGKAKGDIPGVRFKVVKVAGVGLSALFHE 136
Query: 622 NLLKPR 639
KPR
Sbjct: 137 KKEKPR 142
>SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 566
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 49 DPSQEKKGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPSGKLA 207
+ S+E + ++ED + + + G+ K S+F FIR+HF S K A
Sbjct: 8 ESSEEGRINVEDHLEEAKK--DDTGHWKHSGTAKPSKFRAFIRLHFKDSRKFA 58
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,517,659
Number of Sequences: 5004
Number of extensions: 69026
Number of successful extensions: 270
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 262
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 471335896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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