Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30027
(726 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 242 2e-64
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 235 4e-62
SB_32548| Best HMM Match : Myosin_head (HMM E-Value=2.9e-17) 115 5e-26
SB_45041| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 4e-24
SB_25986| Best HMM Match : Myosin_head (HMM E-Value=1.4e-17) 106 2e-23
SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41) 106 2e-23
SB_5844| Best HMM Match : RA (HMM E-Value=2.1e-10) 102 3e-22
SB_50655| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 3e-21
SB_29364| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 1e-19
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_10638| Best HMM Match : Myosin_N (HMM E-Value=1.5e-06) 91 8e-19
SB_34413| Best HMM Match : Myosin_head (HMM E-Value=0) 87 1e-17
SB_5693| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 2e-15
SB_42005| Best HMM Match : Myosin_head (HMM E-Value=0) 69 4e-12
SB_18978| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09
SB_41091| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09
SB_42044| Best HMM Match : ubiquitin (HMM E-Value=1.2e-06) 36 0.033
SB_26512| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_41319| Best HMM Match : NACHT (HMM E-Value=5.2e-14) 30 2.2
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_45619| Best HMM Match : M (HMM E-Value=0.01) 29 2.9
SB_59343| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 5.1
SB_55736| Best HMM Match : NACHT (HMM E-Value=3.2e-14) 29 5.1
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_40530| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_20073| Best HMM Match : F5_F8_type_C (HMM E-Value=2.9e-18) 29 5.1
SB_6938| Best HMM Match : Nodulin-like (HMM E-Value=0.17) 28 6.7
SB_56902| Best HMM Match : NACHT (HMM E-Value=1.5e-10) 28 8.9
SB_55897| Best HMM Match : RVT_1 (HMM E-Value=5.3e-37) 28 8.9
SB_48993| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_24015| Best HMM Match : I-set (HMM E-Value=2.7e-21) 28 8.9
SB_12239| Best HMM Match : CPSF_A (HMM E-Value=1.2) 28 8.9
SB_10432| Best HMM Match : OmpH (HMM E-Value=5.2) 28 8.9
SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30) 28 8.9
SB_31551| Best HMM Match : RVT_1 (HMM E-Value=5.3e-37) 28 8.9
SB_30045| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_24088| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29) 28 8.9
SB_9508| Best HMM Match : Secretin_N (HMM E-Value=1.8) 28 8.9
SB_128| Best HMM Match : SH3BP5 (HMM E-Value=3.3) 28 8.9
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 242 bits (593), Expect = 2e-64
Identities = 113/198 (57%), Positives = 144/198 (72%), Gaps = 3/198 (1%)
Frame = +2
Query: 101 DPT-PYLFVSLEQKRI-DQSKPYDGKKACWVPDEKEGFVQGEIKATKGDLVTVNLPGGEE 274
DP P + +++ +I Q+K ++ KK W+PD KEG+ E+K+TKGD V G+E
Sbjct: 4 DPNDPLAILRIDKSQIMAQAKEFESKKWVWIPDPKEGYKAAEVKSTKGDNFLVETNDGQE 63
Query: 275 KTFKKDQLSQVNPPKFEKVEDMADLTYLNDAAVLHNLRQRYYAKLIYTYSGLFCVAINPY 454
K+ Q+NPPK+EK EDM++LTYLN+A+V+HNL+QRY++ LIYTYSGLFCVAINPY
Sbjct: 64 VEINKNDTEQMNPPKYEKTEDMSNLTYLNEASVVHNLKQRYFSGLIYTYSGLFCVAINPY 123
Query: 455 KRFPVYTTRCAKLYRGKRRSEVPPHIFAISDGAYVNMLTNHENQSMLITGESGAGKTENT 634
+R P+YT + YRGKR++E PPH+F I D AY NML + ENQSMLITGESGAGKTENT
Sbjct: 124 RRLPIYTDKIVFAYRGKRKTEAPPHVFCICDNAYQNMLQDRENQSMLITGESGAGKTENT 183
Query: 635 KKVIAYFATV-GASQKKD 685
KKVI Y A V G K D
Sbjct: 184 KKVIQYLAHVSGGISKAD 201
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 235 bits (574), Expect = 4e-62
Identities = 111/186 (59%), Positives = 137/186 (73%), Gaps = 4/186 (2%)
Frame = +2
Query: 161 YDGKKACWVPDEKEGFVQGEIKATKGDLVTVNLPGGEEKTFKKDQLSQVNPPKFEKVEDM 340
+ K+ W+PDEK+GFV IK D V + GG++K KD + ++NPPKFEKVEDM
Sbjct: 24 WSSKRLVWIPDEKQGFVGASIKDESKDEYVVEVEGGKKKKVHKDDIQRMNPPKFEKVEDM 83
Query: 341 ADLTYLNDAAVLHNLRQRYYAKLIYTYSGLFCVAINPYKRFPVYTTRCAKLYRGKRRSEV 520
ADLT LN+A+VLHNL+ RYY+ LIYTYSGLFCV +NPYKR P+YT + +YRGK+R EV
Sbjct: 84 ADLTCLNEASVLHNLKDRYYSGLIYTYSGLFCVVVNPYKRLPIYTDKVIDMYRGKKRHEV 143
Query: 521 PPHIFAISDGAYVNMLTNHENQSMLITGESGAGKTENTKKVIAYFATV-GASQKK---DP 688
PPHI+AI+D AY +ML + ENQS+L TGESGAGKTENTKKVI Y A V G S K P
Sbjct: 144 PPHIYAITDTAYRSMLQDRENQSILCTGESGAGKTENTKKVIQYLAAVAGHSYGKVHATP 203
Query: 689 SQGEEG 706
+ E+G
Sbjct: 204 QKTEKG 209
>SB_32548| Best HMM Match : Myosin_head (HMM E-Value=2.9e-17)
Length = 546
Score = 115 bits (276), Expect = 5e-26
Identities = 53/107 (49%), Positives = 73/107 (68%)
Frame = +2
Query: 353 YLNDAAVLHNLRQRYYAKLIYTYSGLFCVAINPYKRFPVYTTRCAKLYRGKRRSEVPPHI 532
+ ++ A L NLR+RY + LIYTY G V+INPYK P+Y+ + YRG+ E+PPHI
Sbjct: 33 FKSEDAFLDNLRKRYESNLIYTYIGTVVVSINPYKNLPIYSKAVIEKYRGENLYELPPHI 92
Query: 533 FAISDGAYVNMLTNHENQSMLITGESGAGKTENTKKVIAYFATVGAS 673
+AISD AY +M +Q MLI+GESGAGKTE +K+++ Y A + S
Sbjct: 93 YAISDEAYRSMREECTDQCMLISGESGAGKTEASKRILEYLAAISTS 139
>SB_45041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1278
Score = 87.8 bits (208), Expect(2) = 4e-24
Identities = 47/136 (34%), Positives = 77/136 (56%), Gaps = 5/136 (3%)
Frame = +2
Query: 182 WVPDEKEGFVQGEI-KATKGDLVTVNLPGGEEKTF--KKDQLSQVNPPKFEKVE-DMADL 349
W+P ++ GE+ K + ++ + L G E +K +L + P+ E D+ L
Sbjct: 354 WIPHPDLVWIAGELTKDIEDKILEILLEDGREIIIDTRKSRLPPLRNPEILVGENDLTTL 413
Query: 350 TYLNDAAVLHNLRQRYY-AKLIYTYSGLFCVAINPYKRFPVYTTRCAKLYRGKRRSEVPP 526
+YL++ AVLHNL R+ + IYTY G+ VAINPY+ P+Y YRG+ ++ P
Sbjct: 414 SYLHEPAVLHNLNVRFIQSNAIYTYCGIVLVAINPYEELPLYGPDIVAAYRGRSMGDMDP 473
Query: 527 HIFAISDGAYVNMLTN 574
HIFA+++ A+ +M+ N
Sbjct: 474 HIFAVAEDAFQSMIRN 489
Score = 41.5 bits (93), Expect(2) = 4e-24
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2
Query: 563 MLTNHENQSMLITGESGAGKTENTKKVIAYFATVGAS 673
M+ + N S++++GESGAGKT + K + YF+ VG +
Sbjct: 524 MIRDERNPSVIVSGESGAGKTVSAKNAMRYFSAVGGA 560
>SB_25986| Best HMM Match : Myosin_head (HMM E-Value=1.4e-17)
Length = 1189
Score = 106 bits (255), Expect = 2e-23
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 1/126 (0%)
Frame = +2
Query: 290 DQLSQVNPPKFEKVEDMADLTYLNDAAVLHNLRQRYYAKLIYTYSGLFCVAINPYKRFPV 469
+ L ++P E VE+M +L L++A +L NL RY A IYTY G VA+NPY FP+
Sbjct: 820 ESLKHMHPSSVEGVENMIELGDLDEAGILRNLLIRYRANKIYTYVGSVLVAVNPYCSFPI 879
Query: 470 YTTRCAKLY-RGKRRSEVPPHIFAISDGAYVNMLTNHENQSMLITGESGAGKTENTKKVI 646
Y T Y + +++PPHI+A + ++ M NQ ++I+GESGAGKTE+TK ++
Sbjct: 880 YGTAYISRYQKAVNATDLPPHIYATGEMSFAMMKREKHNQCVVISGESGAGKTESTKFIL 939
Query: 647 AYFATV 664
Y V
Sbjct: 940 QYLTAV 945
>SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41)
Length = 1017
Score = 106 bits (255), Expect = 2e-23
Identities = 50/100 (50%), Positives = 69/100 (69%)
Frame = +2
Query: 329 VEDMADLTYLNDAAVLHNLRQRYYAKLIYTYSGLFCVAINPYKRFPVYTTRCAKLYRGKR 508
V DM L L + A++ NL RY AK IYTY G V+INPY++FP+YT YR +
Sbjct: 23 VSDMVLLEPLTEDAIMENLWDRYNAKAIYTYIGNVVVSINPYRKFPLYTREVIAEYRSRN 82
Query: 509 RSEVPPHIFAISDGAYVNMLTNHENQSMLITGESGAGKTE 628
E+PPHI+AI+D AY +M ++++Q ++ITGESG+GKTE
Sbjct: 83 IYELPPHIYAIADDAYRSMRDHNKDQCIIITGESGSGKTE 122
>SB_5844| Best HMM Match : RA (HMM E-Value=2.1e-10)
Length = 280
Score = 102 bits (245), Expect = 3e-22
Identities = 48/128 (37%), Positives = 81/128 (63%)
Frame = +2
Query: 332 EDMADLTYLNDAAVLHNLRQRYYAKLIYTYSGLFCVAINPYKRFPVYTTRCAKLYRGKRR 511
+D+ L L++ +L +L++R+ IYTY G +A+NP++ FP+Y + +Y K
Sbjct: 149 DDLCGLPNLDEEMLLKHLQERFALGRIYTYVGEILLAVNPFRFFPIYNPKFINVYNNKNL 208
Query: 512 SEVPPHIFAISDGAYVNMLTNHENQSMLITGESGAGKTENTKKVIAYFATVGASQKKDPS 691
S +PPHIFAI+D A+ ML ++Q ++I+GESG+GKTE+TK ++ + + S+K S
Sbjct: 209 SSLPPHIFAIADVAFYRMLKEKKSQCIVISGESGSGKTESTKLIVHHLTAL--SRKTQAS 266
Query: 692 QGEEGLPG 715
E+ + G
Sbjct: 267 DVEKTILG 274
>SB_50655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2033
Score = 99.1 bits (236), Expect = 3e-21
Identities = 51/120 (42%), Positives = 72/120 (60%), Gaps = 6/120 (5%)
Frame = +2
Query: 335 DMADLTYLNDAAVLHNLRQRYYAKLIYTYSGLFCVAINPYKRFPVYTTRCAKLYRGKRRS 514
D+A L L +LH L+ RY +IYTY G +A+NP+K P+Y+ A Y+ +S
Sbjct: 10 DLATLPELETEIILHELKIRYQQDIIYTYVGDILIAVNPFKTLPIYSQNVASQYKMAVKS 69
Query: 515 EVPPHIFAISDGAYVNML----TNHENQSMLITGESGAGKTENTKKVIAYFATV--GASQ 676
+ PHI+A++D AY ML T +NQ +I+GESGAGKTE+TK +I + G SQ
Sbjct: 70 SLAPHIYALADAAYQAMLGKGSTGPQNQCCVISGESGAGKTESTKFIICQLVELSQGTSQ 129
>SB_29364| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 884
Score = 93.9 bits (223), Expect = 1e-19
Identities = 40/83 (48%), Positives = 57/83 (68%)
Frame = +2
Query: 416 TYSGLFCVAINPYKRFPVYTTRCAKLYRGKRRSEVPPHIFAISDGAYVNMLTNHENQSML 595
TY+G VA+NPY+ +P+Y Y+GK+ ++PPHIFAI+D AY M +Q ++
Sbjct: 42 TYTGSILVAVNPYQLYPIYDAEYIAKYKGKKLGDLPPHIFAIADNAYTFMKRELHDQCVI 101
Query: 596 ITGESGAGKTENTKKVIAYFATV 664
I+GESGAGKTE+TK ++ Y A V
Sbjct: 102 ISGESGAGKTESTKLILQYLAAV 124
>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2463
Score = 93.1 bits (221), Expect = 2e-19
Identities = 51/150 (34%), Positives = 84/150 (56%), Gaps = 1/150 (0%)
Frame = +2
Query: 263 GGEEKTFKKDQLSQVNPPKFEKVEDMADLTYLNDAAVLHNLRQRYYAKLIYTYSGLFCVA 442
GGE T +++ + + NPP++++ ED+A L YLN+++ LH LRQRY + LI+TY+G +
Sbjct: 355 GGELITIEEENIEKANPPQYDRAEDLATLRYLNESSCLHTLRQRYGSNLIHTYAGPNMIV 414
Query: 443 INPYKRFPVYTTRCAKLYRGKRRSEVPPHIFAISDGAYVNMLTNHENQSMLITGESGAGK 622
INP ++ +YT + AY NML +QS+++ G SG+GK
Sbjct: 415 INPQQQLAIYTDKT----------------------AYRNMLATRIDQSVVLMGSSGSGK 452
Query: 623 TENTKKVIAYFATV-GASQKKDPSQGEEGL 709
T K ++ Y +++ G+S Q EG+
Sbjct: 453 TTCAKHILHYLSSIAGSSHSPVTDQNFEGI 482
>SB_10638| Best HMM Match : Myosin_N (HMM E-Value=1.5e-06)
Length = 1977
Score = 91.1 bits (216), Expect = 8e-19
Identities = 49/131 (37%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Frame = +2
Query: 164 DGKKACWVPDEKEGFVQGEIKATKGDLVTVNLPG--GEEKTFKKDQLSQVNPPKFEKVED 337
DG + WVPD + G++ G I D +TV L G G+ T D+ + VED
Sbjct: 1770 DGGRKLWVPDNEHGYLLGSIVDIGSDEITVQLDGFKGKHVTAPYDRTFPAEKDSNKDVED 1829
Query: 338 MADLTYLNDAAVLHNLRQRYYAKLIYTYSGLFCVAINPYKRF-PVYTTRCAKLYRGKRRS 514
L +LN+ +L+NLR RY IYTY +A+NPY +YT Y GK
Sbjct: 1830 NCALMFLNEGTLLNNLRVRYKKDKIYTYVANILLAVNPYHEVKELYTKETIMKYHGKSLG 1889
Query: 515 EVPPHIFAISD 547
+PPH+FAI D
Sbjct: 1890 TLPPHVFAIDD 1900
>SB_34413| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 650
Score = 87.4 bits (207), Expect = 1e-17
Identities = 43/118 (36%), Positives = 69/118 (58%), Gaps = 1/118 (0%)
Frame = +2
Query: 335 DMADLTYLNDAAVLHNLRQRYYAKLIYTYSGLFCVAINPYKRFPVYTTRCAKLYRGKRRS 514
D L + A + NL R++ + IYTY G V++NPYK +Y + Y+ +
Sbjct: 13 DFVLLDEVTKTAFMENLESRFHKERIYTYIGEVVVSVNPYKTLNIYGDDKIQEYKMREMY 72
Query: 515 EVPPHIFAISDGAYVNMLTNHENQSMLITGESGAGKTENTKKVIAYFATV-GASQKKD 685
E PPHIFA++D +Y M E+ ++I+GESG+GKTE +K ++ Y A + S++K+
Sbjct: 73 ERPPHIFALADASYRAMKRRSEDTCIMISGESGSGKTEASKIIMRYIAAITNLSKQKE 130
>SB_5693| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1429
Score = 80.2 bits (189), Expect = 2e-15
Identities = 35/89 (39%), Positives = 54/89 (60%)
Frame = +2
Query: 410 IYTYSGLFCVAINPYKRFPVYTTRCAKLYRGKRRSEVPPHIFAISDGAYVNMLTNHENQS 589
+ TY G +++NPYK+ YT + Y + +PPHIFAI AY + +Q
Sbjct: 6 LQTYIGKILLSVNPYKQLDSYTPELVEKYADQAIGRLPPHIFAIGSAAYAEIQKGGAHQV 65
Query: 590 MLITGESGAGKTENTKKVIAYFATVGASQ 676
++I+GESGAGKTE+TK+++ Y AT ++
Sbjct: 66 IVISGESGAGKTESTKQLVQYLATANPTK 94
>SB_42005| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 621
Score = 68.9 bits (161), Expect = 4e-12
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +2
Query: 338 MADLTYLNDAAVLHNLRQRYYAKLIYTYSGLFCVAINPYKRFP-VYTTRCAKLYRGKRRS 514
MA+L L+D+A+LHNL R+ IYTY G A+NPY +Y Y+ K
Sbjct: 1 MANLADLHDSAILHNLHLRFKTDKIYTYIGTILCAVNPYSFIDGLYDESIMDKYQEKHVG 60
Query: 515 EVPPHIFAISDGAYVNMLTNHENQSMLIT 601
E+ PHI+AIS+ Y +M E Q +LI+
Sbjct: 61 EMEPHIYAISNECYYSMWKKGERQCVLIS 89
>SB_18978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 58.0 bits (134), Expect = 7e-09
Identities = 23/61 (37%), Positives = 40/61 (65%)
Frame = +2
Query: 485 AKLYRGKRRSEVPPHIFAISDGAYVNMLTNHENQSMLITGESGAGKTENTKKVIAYFATV 664
++ YR +S +PPH++ ++D Y M+ N+ Q +LI+GESGAGKT + ++ + A +
Sbjct: 2 SRAYRNAEKSSLPPHLYMVADMTYQAMIHNNSPQCLLISGESGAGKTVSANYLVQHLADL 61
Query: 665 G 667
G
Sbjct: 62 G 62
>SB_41091| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 58.0 bits (134), Expect = 7e-09
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 10/144 (6%)
Frame = +2
Query: 257 LPGGEE---KTFKKDQLSQVNPPK-FEKVEDMADLTYLNDAAVLHNLRQRYYAKLIYTYS 424
+P GE K K + + PPK + E A ND L +L + +
Sbjct: 69 IPLGERVVPKPSTKSKKPPIPPPKRLLQKETQAKHADFNDLTALTSLNEE---------T 119
Query: 425 GLFCVAINPYKRFP-VYTTRCAKLYRGKRRSE---VPPHIFAISDGAYVNMLTNHE--NQ 586
GL VA+NP+ +Y + YR SE +PPHI+A+ AY ++ E NQ
Sbjct: 120 GLPLVAVNPFHEVAALYDEEVEEKYRSASASESRELPPHIYAVGQKAYCDLKRGLETSNQ 179
Query: 587 SMLITGESGAGKTENTKKVIAYFA 658
S++++GESGAGKT T+ ++ + +
Sbjct: 180 SIIVSGESGAGKTWTTRSLMQFIS 203
>SB_42044| Best HMM Match : ubiquitin (HMM E-Value=1.2e-06)
Length = 1425
Score = 35.9 bits (79), Expect = 0.033
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 50 VSPPKMPKPVVQEGEDPDPTPYLFVS-LEQKRIDQSKPYDGKKACWVPDEKEGFVQGEIK 226
V PP P PV DP P P L V+ LE++ I+ +D C V E + GE+
Sbjct: 146 VQPPPAPTPVGSTPSDPPPAPSLLVAPLEEEDIE----FDDDLHCTVLYEFQATNDGELS 201
Query: 227 ATKGD 241
T G+
Sbjct: 202 VTVGE 206
>SB_26512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 33.5 bits (73), Expect = 0.18
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +2
Query: 137 KRIDQSKPYDGKKACWVPDEKEGFVQGEIKATKGDLVTVNLPGGEEKTFKKDQLSQVNPP 316
K+ +SK G+K+ VPD+K V GE D + +PG + K + QV
Sbjct: 208 KKDKKSKQVPGEKSKQVPDKKSKQVPGEKSKQVPDKKSKQVPGEKSKQVSDKKSKQVPGK 267
Query: 317 KFEKVED 337
K ++V D
Sbjct: 268 KSKQVPD 274
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +2
Query: 149 QSKPYDGKKACWVPDEKEGFVQGEIKATKGDLVTVNLPGGEEKTFKKDQLSQVNPPKFEK 328
+SK G+K+ VPD+K V GE D + +PG + K ++ Q + K ++
Sbjct: 228 KSKQVPGEKSKQVPDKKSKQVPGEKSKQVSDKKSKQVPGKKSKQVPDEKSKQASGKKSKQ 287
Query: 329 VEDMA 343
+ A
Sbjct: 288 ESNTA 292
>SB_41319| Best HMM Match : NACHT (HMM E-Value=5.2e-14)
Length = 961
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 584 QSMLITGESGAGKTENTKKVIAYFAT 661
+S+L+ GESGAGKT KK+ +AT
Sbjct: 534 RSVLLEGESGAGKTTLCKKIAYDWAT 559
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 416 TYSGLFCVAINPYKRFPVYTTRCAKLYRGKRRS 514
T G +++NP+K+ +Y +LY GK+ S
Sbjct: 58 TNIGRVLISVNPFKKINIYGMDAVELYSGKKHS 90
>SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1303
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 575 HENQSMLITGESGAGKTENTKKVIA 649
H+NQ +++ GE+G+GKT + +A
Sbjct: 292 HQNQVLIVIGETGSGKTTQITQYLA 316
>SB_45619| Best HMM Match : M (HMM E-Value=0.01)
Length = 1315
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +1
Query: 364 RCRTPQSATTILRETNLYVLGSLLCGHQPLQEIPRVHDTMRQ 489
R RT QSA + N Y S LC H+P Q + TM Q
Sbjct: 947 RTRTQQSADYAINHDNTYATVSGLC-HKPRQHVRNSKRTMNQ 987
>SB_59343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 864
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 584 QSMLITGESGAGKTENTKKVIAYFAT 661
+S+L+ G+SGAGKT KK+ +AT
Sbjct: 395 RSVLLEGDSGAGKTTLCKKIAYDWAT 420
>SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 3804
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 504 SVVRKCHLTSSPFPTALTSTC*PTTRINLC 593
SV +CH P PTA + C P R N C
Sbjct: 3432 SVDARCHALLPPSPTAEATGCSPCRRHNAC 3461
>SB_55736| Best HMM Match : NACHT (HMM E-Value=3.2e-14)
Length = 696
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 584 QSMLITGESGAGKTENTKKVIAYFAT 661
+S+L+ G+SGAGKT KK+ +AT
Sbjct: 42 RSVLLEGDSGAGKTTLCKKIAYDWAT 67
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 584 QSMLITGESGAGKTENTKKVIAYFAT 661
+S+L+ G+SGAGKT KK+ +AT
Sbjct: 1496 RSVLLEGDSGAGKTTLCKKIAYDWAT 1521
>SB_40530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 584 QSMLITGESGAGKTENTKKVIAYFAT 661
+S+L+ G+SGAGKT KK+ +AT
Sbjct: 358 RSVLLEGDSGAGKTTLCKKIAYDWAT 383
>SB_20073| Best HMM Match : F5_F8_type_C (HMM E-Value=2.9e-18)
Length = 593
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 509 DACHGTAWRIVSCTRGISCKG*WPHRRDP 423
+AC G A+ I C G+ C P+R DP
Sbjct: 102 EACGGLAYHIGHCDSGLYCNITGPYRPDP 130
>SB_6938| Best HMM Match : Nodulin-like (HMM E-Value=0.17)
Length = 484
Score = 28.3 bits (60), Expect = 6.7
Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 12/146 (8%)
Frame = +2
Query: 263 GGEEKTFKKDQ-LSQVNPPKFEKVEDMADLTYLNDAAVLHNLRQRYYAKLIYTYSGLFCV 439
G E ++D L + + E +E + ++D H+L + + TYSG F +
Sbjct: 6 GAESSELERDMYLPSLTDQELEALESLDQSIRIHDD---HHLNEDEEDNISQTYSGDFAI 62
Query: 440 ---AINPYKRFPVYTTRCAK-----LYRGKRRSEVPPHI---FAISDGAYVNMLTNHENQ 586
+ P+K + TR K L G E I + + DG+ + + +N
Sbjct: 63 LPLSFQPFKLAAIPETREYKPEITSLPYGDVDEERNKKINAGYILFDGSEIKYVNKGKNT 122
Query: 587 SMLITGESGAGKTENTKKVIAYFATV 664
+ T SG+G ++ + ++ +T+
Sbjct: 123 DSVRTSGSGSGGSDRASSIRSHSSTI 148
>SB_56902| Best HMM Match : NACHT (HMM E-Value=1.5e-10)
Length = 1037
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 584 QSMLITGESGAGKTENTKKVIAYFATVGASQKKDP 688
+S+L+ GESG GKT +K +AY GA K P
Sbjct: 137 RSVLLEGESGVGKTTFCQK-LAYDWAKGALPKSFP 170
>SB_55897| Best HMM Match : RVT_1 (HMM E-Value=5.3e-37)
Length = 732
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 590 MLITGESGAGKTENTKKVIAYFATVGASQKKD 685
+L+TGES A EN +KV+A G K++
Sbjct: 172 ILVTGESTAESLENLEKVLARLDEAGLRLKRE 203
>SB_48993| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 590 MLITGESGAGKTENTKKVIAYFATVGASQKKD 685
+L+TGES A EN +KV+A G K++
Sbjct: 57 ILVTGESTAESLENLEKVLARLDEAGLRLKRE 88
>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1829
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 590 MLITGESGAGKTENTKKVIAYFATVGASQKKD 685
+L+TGES A EN +KV+A G K++
Sbjct: 1115 ILVTGESTAESLENLEKVLARLDEAGLRLKRE 1146
>SB_24015| Best HMM Match : I-set (HMM E-Value=2.7e-21)
Length = 609
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Frame = -2
Query: 191 QAPSMPSCHRKVCSG----RYASVP----EKRTGTGSDRGPRPLGRQVSAFSEG*RDFWA 36
+ P+ PS HRK R A+V E G+G + G +P R A + R +W
Sbjct: 441 EIPTRPSVHRKTTHRHTPTRSATVERIDQESGEGSGDESGFQPTTRPKIAHRKSTRHYWK 500
Query: 35 SRDTR 21
+R T+
Sbjct: 501 NRPTQ 505
>SB_12239| Best HMM Match : CPSF_A (HMM E-Value=1.2)
Length = 864
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 245 VTVNLPGGEEKTFKKDQLSQVNPPKFEKVEDMADLTYLNDAAVLH-NLRQRYYA 403
V + L GGE F+ D Q+N E+ E AD+ + +LH LR R+ A
Sbjct: 501 VVIALTGGEVVYFEMDSSGQLN-EYTERKEMSADVQCMALGTILHGELRSRFLA 553
>SB_10432| Best HMM Match : OmpH (HMM E-Value=5.2)
Length = 393
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 590 MLITGESGAGKTENTKKVIAYFATVGASQKKDPSQGE 700
+L+ G+SGAGKT TKK+ + +A S +GE
Sbjct: 319 VLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEGE 355
>SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30)
Length = 1280
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 590 MLITGESGAGKTENTKKVIAYFATVGASQKKD 685
+L+TGES A EN +KV+A G K++
Sbjct: 406 ILVTGESTAESLENLEKVLARLDEAGLRLKRE 437
>SB_31551| Best HMM Match : RVT_1 (HMM E-Value=5.3e-37)
Length = 429
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 590 MLITGESGAGKTENTKKVIAYFATVGASQKKD 685
+L+TGES A EN +KV+A G K++
Sbjct: 145 ILVTGESTAESLENLEKVLARLDEAGLRLKRE 176
>SB_30045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -3
Query: 268 ATGQVDGDQVSLGGLDLALHEALLFIRHP--ACLLAIVRFALVDTL 137
A G V+G Q++ GG+ L+L+ ++ + H C AI A+ + +
Sbjct: 282 AEGGVEGSQITEGGVPLSLYVVVVTVHHHYFFCFFAIDACAIKEAI 327
>SB_24088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.9 bits (59), Expect = 8.9
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
Frame = +2
Query: 335 DMADLTYLN-DAAVLHNLRQRYYAKLIYTYSGLFCVAINPYKRFP-------VYTTRCAK 490
D + LN D V RQR++ K + SG FCV +P + + T CA
Sbjct: 54 DFVIMPVLNPDGYVFTWERQRFWRKTLKPNSGTFCVGTDPNRNWDYKWGAEGASTDPCAD 113
Query: 491 LYRG 502
YRG
Sbjct: 114 DYRG 117
>SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29)
Length = 1544
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 590 MLITGESGAGKTENTKKVIAYFATVGASQKKD 685
+L+TGES A EN +KV+A G K++
Sbjct: 615 ILVTGESTAESLENLEKVLARLDEAGLRLKRE 646
>SB_9508| Best HMM Match : Secretin_N (HMM E-Value=1.8)
Length = 391
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 590 MLITGESGAGKTENTKKVIAYFATVGASQKKD 685
+L+TGES A EN +KV+A G K++
Sbjct: 39 ILVTGESTAESLENLEKVLARLDEAGLRLKRE 70
>SB_128| Best HMM Match : SH3BP5 (HMM E-Value=3.3)
Length = 410
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 41 KSLVSPPKMPKPVVQEGEDPDPTPYLFVSLEQKRIDQSKPYDGKKAC 181
KS V PP P PV ++ P P P L V ++ + +D ++ C
Sbjct: 294 KSAVQPP--PAPVDEQQPGPPPAPSLLVPPMEEADVEDGEFDEEQRC 338
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,783,680
Number of Sequences: 59808
Number of extensions: 558888
Number of successful extensions: 2102
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2089
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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