Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30025
(778 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0232 + 27041793-27042087,27042822-27042943,27043098-270432... 36 0.047
03_06_0155 - 32031370-32031707,32033066-32033279 34 0.14
12_02_0847 + 23630937-23631099,23631200-23631396,23631604-236317... 32 0.58
11_06_0722 - 26678873-26680843 31 1.0
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 31 1.0
12_01_0979 - 9914779-9915327,9915409-9915536,9915947-9916050,991... 30 2.4
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 30 2.4
05_04_0158 + 18613265-18615304 30 2.4
08_02_0957 + 23033602-23034749,23035519-23035765,23036598-230367... 29 3.1
03_05_0843 + 28126480-28127007,28127092-28127457,28129388-281294... 29 3.1
02_03_0357 + 18075171-18077240 29 4.1
02_04_0157 + 20388761-20388763,20389807-20389935,20390206-203903... 28 7.2
02_01_0326 - 2230617-2230735,2231430-2231493,2231646-2231849,223... 28 7.2
09_06_0200 + 21539963-21541271,21541912-21542013,21542095-215422... 28 9.5
>02_05_0232 + 27041793-27042087,27042822-27042943,27043098-27043219,
27043601-27043705,27043828-27044257,27044356-27044517,
27044565-27045260,27045349-27046128,27046441-27046654,
27047621-27047981,27047993-27048140,27048276-27048419,
27048784-27048888,27049749-27049794,27050089-27050255,
27050338-27050490,27050654-27050950,27051053-27051220,
27051298-27051363,27051451-27051927,27052031-27052768,
27052935-27053120
Length = 1993
Score = 35.5 bits (78), Expect = 0.047
Identities = 28/113 (24%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Frame = +3
Query: 444 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 623
E+ ++ ++ + AMLQ +KD N +Q+K ++ ++E +TK Q +E
Sbjct: 1431 EEAKKFQKIKMDLLAMLQRVKDVENLNRNEKMQRKDMEEKIARQRMEIEETKRQRDELYH 1490
Query: 624 ISLSIRIKPLTIEGLSVD---KLRQKAQ-ELWECIVKL-ETEKYDLEERQKRQ 767
++ + L +E L K R+KA+ E+ + K+ + E L E ++R+
Sbjct: 1491 ELKDVKEQKLCLERLDSSKETKRRRKAESEMLSALKKVHDLEHQYLNELKRRE 1543
>03_06_0155 - 32031370-32031707,32033066-32033279
Length = 183
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +3
Query: 438 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 617
IEE +QR EEA + +Q + +A K + + + G+ + R K+ E L E+
Sbjct: 98 IEELKQREEEATQAQQQADVKLLEAKKLASQYQKEADKCSSGMDTCEEAREKSSEALVEQ 157
Query: 618 KKIS 629
+K++
Sbjct: 158 RKLT 161
>12_02_0847 +
23630937-23631099,23631200-23631396,23631604-23631738,
23631904-23632077,23632195-23632407,23632507-23632751,
23632890-23632930,23633200-23633238,23633552-23633565
Length = 406
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 435 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 614
+I E+R+R + ++ A+L+AMK+ N ++ E N +LE K+QL+E
Sbjct: 41 EIAEERERFQLEQRGNDALLEAMKE-ELVAANNELEAAKEEISRKNNELE--SVKKQLQE 97
Query: 615 EK 620
+
Sbjct: 98 SE 99
>11_06_0722 - 26678873-26680843
Length = 656
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 588 NKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEK 737
NKTK+ +E+K++ LS+ +K IE L K + +L C++ L +
Sbjct: 418 NKTKKGRKEDKRVRLSMDVKKTVIETL---KKNRGLGQLGNCVISLHANE 464
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 31.1 bits (67), Expect = 1.0
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +3
Query: 435 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKK--SENFGLSNAQLERNKTKEQL 608
+I+ +R EE K+ +A LQ + ++KK S+ L + E N+ + +
Sbjct: 575 NIDHQRLENEELLKRERADLQRNLQLHRHELEMEMEKKQASKERELEEKENELNRKMDFV 634
Query: 609 EEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDL 746
E E K + + + L +L+++ + L E KLET+K D+
Sbjct: 635 ENELKRAAELNESKIQKILLEKKQLQKEKEVLVEDRQKLETDKADI 680
Score = 30.7 bits (66), Expect = 1.3
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 8/115 (6%)
Frame = +3
Query: 435 DIEEKRQRLEEAEKKRQAMLQAMKDASKTG-------PNFTIQKKSENFGLSNAQLERNK 593
+ E K ++LEE EKK + + K G N ++ K +F L QLE K
Sbjct: 295 EAESKNRKLEEREKKIAEREEKVSAREKVGLQKLLEDHNVKLESKRRDFDL---QLENEK 351
Query: 594 TK-EQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEER 755
+ + +K+ L R K + S +KL +K Q L E KLE + DL+ +
Sbjct: 352 KSFDAMLVQKEADLVQREKDVR---SSEEKLSKKEQVLNESKKKLEEWQNDLDTK 403
>12_01_0979 -
9914779-9915327,9915409-9915536,9915947-9916050,
9919832-9919946,9921036-9921528
Length = 462
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/61 (32%), Positives = 26/61 (42%)
Frame = -2
Query: 771 SPVSFASLRDRISRSRV*RCTPRVPGPSVGVCRRRDPRWSAA*CGWTGRSSSPLPAAPWS 592
+P S AS +SR +P +P PS P CGW GR++ P AP
Sbjct: 3 APSSLAS-SSHLSRRATAAASPSIPPPSP------PPPPQRLRCGWVGRAAPPTRRAPGV 55
Query: 591 C 589
C
Sbjct: 56 C 56
>06_03_1404 -
29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 740 VFLGLEFDDALPEFLGLLSEFVDGET 663
VF+ EFD+ LP++L L VD +T
Sbjct: 451 VFISDEFDELLPKYLSFLKGLVDSDT 476
>05_04_0158 + 18613265-18615304
Length = 679
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Frame = +3
Query: 441 EEKRQRLEEAEKKRQAML-----QAMKDASKTGPNFTIQKK----SENFGLSNAQLERNK 593
+EK ++ +E E K Q L +AMK KTG N I+KK +E +A++ ++K
Sbjct: 608 QEKVEKNQEKEMKIQEKLGEIFDKAMKSEEKTGQNPGIEKKIQDTAEKKQEHDARVVQDK 667
Query: 594 TKEQLEEEKKI 626
++ +E KKI
Sbjct: 668 VEKIQDEAKKI 678
>08_02_0957 +
23033602-23034749,23035519-23035765,23036598-23036744,
23036849-23037076
Length = 589
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +3
Query: 456 RLEEAEKKRQAMLQAMKDASKTGPNFT--IQKKSENFGLSNAQLERNKTKEQLEEEKKIS 629
RLE + +++A+ ++ ++T IQ+K E+ +LE +Q +
Sbjct: 254 RLEALQAEKEALTADVEKFEAVVKSWTVKIQEKEESSVHLEKELEAKLMDQQRIAAENEE 313
Query: 630 LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEER 755
L ++ + VD+++++ Q + VKLE LEE+
Sbjct: 314 LMKKVDAQVVNVRDVDRMQREIQSVERDNVKLENGNATLEEK 355
>03_05_0843 +
28126480-28127007,28127092-28127457,28129388-28129487,
28130266-28130546,28130643-28130705,28131276-28131431,
28131913-28132080,28132158-28132298,28132714-28132840,
28132888-28132994,28134142-28134372,28134446-28134559,
28135091-28135261
Length = 850
Score = 29.5 bits (63), Expect = 3.1
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Frame = +3
Query: 435 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 614
+ E R EA + + M M + GP T + +S +L R + +++
Sbjct: 204 ETREDRAAWVEALQATKEMFPRMSTSEMVGPGDT----AAAVAVSTERL-RQRLQQEGVS 258
Query: 615 EKKISLSIRIKPLTIEGL--SVDKLRQKAQELWECIVKLETEKYDLE 749
E I+ S RI E L + L+QK L + + +LETEK DLE
Sbjct: 259 EAAIADSERIVRTEFEVLHKQLMLLKQKQTLLLDTLRQLETEKVDLE 305
>02_03_0357 + 18075171-18077240
Length = 689
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Frame = +3
Query: 534 TIQKKSENFGLSNAQLERNKT-----KEQLEEEKKISLSIRIKP 650
+I++K +NF L+ ++ RN+T QL EE KIS+S + P
Sbjct: 594 SIKEKFKNFNLAFEEIYRNQTTWKVPDPQLREELKISISENVIP 637
>02_04_0157 + 20388761-20388763,20389807-20389935,20390206-20390349,
20390690-20390835,20390915-20391071,20391312-20391370,
20391466-20391664,20392232-20392381,20392471-20392607,
20392717-20392863,20392975-20393076,20395655-20395712,
20395816-20395917,20396236-20396273,20396409-20396535,
20397092-20397259,20397356-20397487,20400222-20400331,
20400400-20400460,20400929-20401106,20401194-20401399,
20401552-20401671,20402523-20402621,20404177-20404386,
20404704-20404843,20404945-20405053,20405351-20405431,
20405523-20405693,20405825-20405974,20407029-20407202,
20407453-20407479,20407688-20407758,20407843-20407942,
20408305-20408361,20409457-20409513,20409656-20409736,
20410336-20410421,20410535-20410649
Length = 1466
Score = 28.3 bits (60), Expect = 7.2
Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Frame = +3
Query: 438 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 617
+EE RL+ ++ R M +A K+ N +Q+K L +L+ N+TK+ L+ E
Sbjct: 910 VEELTWRLQLEKRMRVDMEEA-----KSQENKKLQQK-----LQELELQSNETKDLLKRE 959
Query: 618 KKISLSIRIKPLTIEGLSVD-----KLRQKAQELWECIVKLETEKYDLEER 755
++ + + K + + VD +L + ++L + LET+ + E+R
Sbjct: 960 QETAKAAWEKAALVPEVQVDTTLVNELTAENEKLKTLVASLETKIDETEQR 1010
>02_01_0326 -
2230617-2230735,2231430-2231493,2231646-2231849,
2231945-2232016,2232293-2232458,2232543-2232758,
2232873-2232949,2233056-2233151,2233237-2233280,
2233435-2233522,2233805-2233886,2233961-2234091,
2234264-2234350,2234804-2234887,2234985-2235144,
2235251-2235414,2235757-2235762,2235823-2235879,
2236159-2236278,2236387-2236496,2236587-2236689,
2236789-2236842,2237106-2237168,2237258-2237325,
2237412-2237469,2237684-2237750,2238233-2238309,
2238433-2238516,2238652-2238828,2239010-2239144
Length = 1010
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 758 LPLFEIVFLGLEFDDALPEFLGLLSEFVDGE 666
+PL +IV G E + P F LS+F+DG+
Sbjct: 553 VPLLQIVSFGSELSNRAPTFDMDLSDFMDGD 583
>09_06_0200 +
21539963-21541271,21541912-21542013,21542095-21542291,
21542396-21542603,21542685-21542922,21543010-21543160,
21543538-21543849
Length = 838
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = -2
Query: 660 RWSAA*CGWTGRSSSPLPAAPWSCCAPAGHC 568
RWS+ W P P+ C P G+C
Sbjct: 272 RWSSGSSAWVVLQEWPAGCDPYDFCGPNGYC 302
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,261,642
Number of Sequences: 37544
Number of extensions: 280246
Number of successful extensions: 1155
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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