Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30024X
         (369 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   110   4e-27
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               24   0.66 
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   6.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   6.1  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   8.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   8.1  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  110 bits (265), Expect = 4e-27
 Identities = 51/68 (75%), Positives = 62/68 (91%)
 Frame = -2

Query: 368 KVAADKKKLEEVASKYHLQVRGTRGEHTEAEGGVCDISNKRRMGLTE*DAVKQMYDGIAE 189
           K+AA++ KLEE+A K++LQVRGTRGEHTEAEGG+ DISNKRR+GLTE  AVK+M+DGIAE
Sbjct: 288 KLAANRAKLEEIAGKFNLQVRGTRGEHTEAEGGIYDISNKRRLGLTEYQAVKEMHDGIAE 347

Query: 188 LIKIEKSL 165
           LIK+EK L
Sbjct: 348 LIKLEKEL 355


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +1

Query: 1  FFFLVLTLVCLYF 39
          FF LV+TL+ LYF
Sbjct: 8  FFILVITLIFLYF 20


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = +1

Query: 181 LMSSAMPSYIC 213
           L++++MP+YIC
Sbjct: 649 LVATSMPTYIC 659


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -2

Query: 113 GH*SAGRPSSTTTLYCKT 60
           GH   GRPS TT     T
Sbjct: 216 GHAQMGRPSYTTATMATT 233


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 16  LTLVCLYFPFPY 51
           +TLVCLY P  Y
Sbjct: 750 VTLVCLYSPKIY 761


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 16  LTLVCLYFPFPY 51
           +TLVCLY P  Y
Sbjct: 840 VTLVCLYSPKIY 851


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,784
Number of Sequences: 438
Number of extensions: 1196
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)