Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30022
         (783 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    27   0.22 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.1  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   2.8  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   8.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.4  

>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 695 TVDLWEKKRHRPSSQHTVCPRS*DLQTRGMER 600
           T D  E KRH P + HT C +  + Q  G ++
Sbjct: 57  TPDGAELKRHLPDALHTECSKCSETQKNGSKK 88


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -3

Query: 130 FYLFIKLSSA*YEFVHKLSKFCIKLKYLFPFYYMFY-NKIFC 8
           FY  + +    Y F +    F + L  L   YY +Y + +FC
Sbjct: 228 FYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFC 269



 Score = 21.4 bits (43), Expect = 8.4
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = -3

Query: 133 YFYLFIKLSSA*YEFVHKLSKFCIKLKYLFPFYYMFYNKIFCI 5
           ++Y FI L    Y F +    F + L +L   YY      F +
Sbjct: 103 FYYAFIILLCV-YYFYYAFIIFTVHLLFLLCIYYFVVPLFFLL 144


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 290 FVKRLINLQLSFQSRYSQRLTVSH*RPLP 376
           FVK L  ++ +F S+Y   +TVS   PLP
Sbjct: 156 FVKLLQEMKQAFGSKYVLSVTVSA-NPLP 183


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 488 HSIRTEPWRRPQDLDRQVNTTPA 420
           H  R EP R   ++DR   T PA
Sbjct: 323 HQRRNEPKRPRPNIDRHEVTRPA 345


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 70  FCIKLKYLFPFYYMFYN 20
           FC  + YLF  YY++Y+
Sbjct: 147 FCYFI-YLFTVYYIYYS 162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,316
Number of Sequences: 336
Number of extensions: 4341
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)