Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30022
         (783 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0054 - 6398829-6399047,6399470-6399676,6399858-6400557,640...    29   4.2  
04_03_0376 + 15105874-15106230,15109207-15111573                       28   7.3  
10_01_0145 - 1708597-1708824,1710225-1710468,1711217-1711263,171...    28   9.6  

>02_02_0054 -
           6398829-6399047,6399470-6399676,6399858-6400557,
           6400927-6401120
          Length = 439

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 11/46 (23%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = -3

Query: 619 RHAEWSGPCLGPKPAD---ECKRDFSDEVLKAGQTVIGLQAGSNKG 491
           +++++ GPCL   P D    C++D++ +  +  +  +G   G+  G
Sbjct: 79  KNSKYKGPCLATNPIDRCWRCRKDWATDRKRLARCAMGFGRGATGG 124


>04_03_0376 + 15105874-15106230,15109207-15111573
          Length = 907

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -3

Query: 763 GEHHKLPVCKSKHTVYPTSMCSKP*IYGRKKDIAQVVSTL 644
           G+H +     +KHT  PT+      + GR KD  +++S L
Sbjct: 165 GDHRRYVGVTAKHTSKPTAAYLPRKVIGRDKDREEIISML 204


>10_01_0145 -
           1708597-1708824,1710225-1710468,1711217-1711263,
           1711767-1711857,1712982-1713094,1713387-1713462,
           1713501-1713560,1713759-1713835,1714105-1714672,
           1715332-1715509,1715632-1715774,1717255-1717424,
           1717588-1717822,1718565-1718779
          Length = 814

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -3

Query: 157 HSINGWLRYFYLFIKLSSA*YEFVHKLS 74
           H + GWL YF + + L SA + F+ +L+
Sbjct: 655 HVLRGWLVYFLVLVLLFSAAFMFLTRLT 682


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,217,497
Number of Sequences: 37544
Number of extensions: 426001
Number of successful extensions: 910
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)