Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30022
(783 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical pr... 63 2e-10
AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein. 63 2e-10
U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein. 32 0.40
U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein. 32 0.40
U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein. 32 0.40
U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein. 32 0.40
U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein. 32 0.40
AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated... 32 0.40
AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated... 32 0.40
AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated... 32 0.40
AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin prot... 29 2.8
U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical pr... 29 5.0
U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical pr... 28 6.6
>Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical
protein F43G9.9 protein.
Length = 192
Score = 63.3 bits (147), Expect = 2e-10
Identities = 36/73 (49%), Positives = 48/73 (65%)
Frame = -3
Query: 673 KDIAQVVSTLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNK 494
+D V+ L +L R++ ++ SG LGPK A +R+++DE LKAG VIGLQ GSNK
Sbjct: 120 QDPNAVLICLASLARKSEKNFGRSG--LGPKEAQGDRREWTDEQLKAGHNVIGLQMGSNK 177
Query: 493 GATQSGQNLGAGR 455
GAT SG N+G R
Sbjct: 178 GATASGLNMGNTR 190
>AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein.
Length = 192
Score = 63.3 bits (147), Expect = 2e-10
Identities = 36/73 (49%), Positives = 48/73 (65%)
Frame = -3
Query: 673 KDIAQVVSTLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNK 494
+D V+ L +L R++ ++ SG LGPK A +R+++DE LKAG VIGLQ GSNK
Sbjct: 120 QDPNAVLICLASLARKSEKNFGRSG--LGPKEAQGDRREWTDEQLKAGHNVIGLQMGSNK 177
Query: 493 GATQSGQNLGAGR 455
GAT SG N+G R
Sbjct: 178 GATASGLNMGNTR 190
>U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 32.3 bits (70), Expect = 0.40
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = -3
Query: 682 GRKKDIAQVVSTLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAG 503
G K +Q T F GR+ R G + PAD + +E ++ + ++ LQAG
Sbjct: 82 GTNKYCSQRGMTGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAG 135
Query: 502 SNKGATQSGQ-NLGAGRK 452
+NK +Q G G GR+
Sbjct: 136 TNKYDSQKGMTGFGTGRR 153
>U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein.
Length = 565
Score = 32.3 bits (70), Expect = 0.40
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = -3
Query: 682 GRKKDIAQVVSTLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAG 503
G K +Q T F GR+ R G + PAD + +E ++ + ++ LQAG
Sbjct: 290 GTNKYCSQRGMTGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAG 343
Query: 502 SNKGATQSGQ-NLGAGRK 452
+NK +Q G G GR+
Sbjct: 344 TNKYDSQKGMTGFGTGRR 361
>U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 32.3 bits (70), Expect = 0.40
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = -3
Query: 682 GRKKDIAQVVSTLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAG 503
G K +Q T F GR+ R G + PAD + +E ++ + ++ LQAG
Sbjct: 99 GTNKYCSQRGMTGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAG 152
Query: 502 SNKGATQSGQ-NLGAGRK 452
+NK +Q G G GR+
Sbjct: 153 TNKYDSQKGMTGFGTGRR 170
>U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 32.3 bits (70), Expect = 0.40
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = -3
Query: 682 GRKKDIAQVVSTLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAG 503
G K +Q T F GR+ R G + PAD + +E ++ + ++ LQAG
Sbjct: 82 GTNKYCSQRGMTGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAG 135
Query: 502 SNKGATQSGQ-NLGAGRK 452
+NK +Q G G GR+
Sbjct: 136 TNKYDSQKGMTGFGTGRR 153
>U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 32.3 bits (70), Expect = 0.40
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = -3
Query: 682 GRKKDIAQVVSTLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAG 503
G K +Q T F GR+ R G + PAD + +E ++ + ++ LQAG
Sbjct: 99 GTNKYCSQRGMTGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAG 152
Query: 502 SNKGATQSGQ-NLGAGRK 452
+NK +Q G G GR+
Sbjct: 153 TNKYDSQKGMTGFGTGRR 170
>AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated
protein 87, isoform c protein.
Length = 544
Score = 32.3 bits (70), Expect = 0.40
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = -3
Query: 682 GRKKDIAQVVSTLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAG 503
G K +Q T F GR+ R G + PAD + +E ++ + ++ LQAG
Sbjct: 269 GTNKYCSQRGMTGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAG 322
Query: 502 SNKGATQSGQ-NLGAGRK 452
+NK +Q G G GR+
Sbjct: 323 TNKYDSQKGMTGFGTGRR 340
>AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated
protein 87, isoform a protein.
Length = 565
Score = 32.3 bits (70), Expect = 0.40
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = -3
Query: 682 GRKKDIAQVVSTLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAG 503
G K +Q T F GR+ R G + PAD + +E ++ + ++ LQAG
Sbjct: 290 GTNKYCSQRGMTGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAG 343
Query: 502 SNKGATQSGQ-NLGAGRK 452
+NK +Q G G GR+
Sbjct: 344 TNKYDSQKGMTGFGTGRR 361
>AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated
protein 87, isoform b protein.
Length = 374
Score = 32.3 bits (70), Expect = 0.40
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = -3
Query: 682 GRKKDIAQVVSTLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAG 503
G K +Q T F GR+ R G + PAD + +E ++ + ++ LQAG
Sbjct: 99 GTNKYCSQRGMTGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAG 152
Query: 502 SNKGATQSGQ-NLGAGRK 452
+NK +Q G G GR+
Sbjct: 153 TNKYDSQKGMTGFGTGRR 170
>AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin protein
2 protein.
Length = 203
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -2
Query: 731 KAYGVPDIDVFQTVDLWEKKR 669
K +GV +I FQTVDL+E K+
Sbjct: 102 KQFGVMEISCFQTVDLYENKQ 122
>U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical
protein C53C9.2 protein.
Length = 397
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 547 EVLKAGQTVIGLQAGSNKGATQSG 476
E LK G T + QAG+NK TQ G
Sbjct: 20 EQLKGGNTFLSQQAGTNKFETQKG 43
>U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical
protein K09H11.3 protein.
Length = 1085
Score = 28.3 bits (60), Expect = 6.6
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -1
Query: 711 HRCVPNRRSMGEKKTSPK*SAHCLPSVVRLTDTRNGAAPASDPSP--LTNANVTFLMKS* 538
H+ V R+ GE+ + K SA LPS L + PSP LT +
Sbjct: 336 HKIVTARKK-GEQDSKKKRSASFLPSFRDLKHRFSNMKRTKSPSPERLTTGHTA------ 388
Query: 537 RPGKL*SVCKLDLTREP 487
P KL +C L+L +P
Sbjct: 389 EPSKLTDICSLNLHTDP 405
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,865,247
Number of Sequences: 27780
Number of extensions: 385367
Number of successful extensions: 940
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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