Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30021
         (676 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0285 + 32848085-32848988,32849057-32849245,32850136-328503...    31   0.84 
01_05_0439 - 22159425-22159520,22160137-22160345,22161028-221610...    30   1.9  
12_01_0979 - 9914779-9915327,9915409-9915536,9915947-9916050,991...    29   4.5  
06_02_0035 + 10816723-10819497,10819964-10820011                       28   5.9  

>03_06_0285 +
           32848085-32848988,32849057-32849245,32850136-32850311,
           32850569-32851141
          Length = 613

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +3

Query: 438 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPTSPSKRRAK 554
           +E+ R+RLEE EK +    +A   +S  G + P+ +R +
Sbjct: 452 LEDLRERLEELEKAKTEKKKAASSSSSGGSSGPANKRIR 490


>01_05_0439 -
           22159425-22159520,22160137-22160345,22161028-22161066,
           22161196-22161356,22161447-22161518,22162002-22162183,
           22162580-22162703,22164196-22164299,22165526-22165725,
           22165838-22166069,22166156-22166239,22166329-22166386,
           22166724-22166771,22167924-22168081,22168451-22168501,
           22168585-22168658,22168760-22168835,22169685-22169729,
           22169833-22169899,22169978-22170095,22170580-22170775,
           22171551-22171640,22171985-22172039,22172755-22172975,
           22173362-22173454,22173608-22173721,22173918-22173981,
           22174081-22174181,22174306-22174447,22174528-22174729,
           22174883-22174976,22176172-22176348
          Length = 1248

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +3

Query: 456 RLEEAEKKRQAMLQAMKDASKTGPTSPS 539
           R EE E+KR+++L     ASK  P SPS
Sbjct: 532 RTEEQEEKRKSILAVASGASKQVPNSPS 559


>12_01_0979 -
           9914779-9915327,9915409-9915536,9915947-9916050,
           9919832-9919946,9921036-9921528
          Length = 462

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
 Frame = -1

Query: 640 CGWTGRSSSPLPAAPWSC--CAPAGHCSNRSFALLL-----DGEVGPVLLASFMAWSI 488
           CGW GR++ P   AP  C   +P+   S  +  LL+      G VG V L+S++ + +
Sbjct: 39  CGWVGRAAPPTRRAPGVCSVVSPSKPGSLSAAPLLVCLALGGGGVGRVRLSSWVCFGV 96


>06_02_0035 + 10816723-10819497,10819964-10820011
          Length = 940

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -1

Query: 670 TERPSMVSGLCGWTGRSSSPLPAAPWSCCAP 578
           T+  +   G CGW   ++ P PA    C +P
Sbjct: 361 TKPQAQTHGCCGWMTATARPCPACRSDCASP 391


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,131,328
Number of Sequences: 37544
Number of extensions: 204339
Number of successful extensions: 812
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)