Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30020
         (628 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   288   3e-80
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    53   3e-09
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.4  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    22   5.6  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  288 bits (707), Expect = 3e-80
 Identities = 133/163 (81%), Positives = 146/163 (89%)
 Frame = -1

Query: 628 FLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMQMGGDLQQVYKRLVSAVNEI 449
           FLQAANACRFWPTGRGIYHN++KTFLVWCNEEDHLRIISMQMGGDL QVY+RLV AVNEI
Sbjct: 193 FLQAANACRFWPTGRGIYHNDDKTFLVWCNEEDHLRIISMQMGGDLGQVYRRLVHAVNEI 252

Query: 448 EKKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRG 269
           EK++ FSH+DRLGFLTFCPTNLGTTVRASVHI           LEE+A K++LQVRGTRG
Sbjct: 253 EKRLLFSHNDRLGFLTFCPTNLGTTVRASVHIKLPKLAANRAKLEEIAGKFNLQVRGTRG 312

Query: 268 EHTEAEGGVYDISNKRRMGLTEYDAVKEMYDGIAELIKIEKSL 140
           EHTEAEGG+YDISNKRR+GLTEY AVKEM+DGIAELIK+EK L
Sbjct: 313 EHTEAEGGIYDISNKRRLGLTEYQAVKEMHDGIAELIKLEKEL 355


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 52.8 bits (121), Expect = 3e-09
 Identities = 21/24 (87%), Positives = 23/24 (95%)
 Frame = -1

Query: 628 FLQAANACRFWPTGRGIYHNENKT 557
           FLQAANA RFWPTGRGIYHN++KT
Sbjct: 177 FLQAANAXRFWPTGRGIYHNDDKT 200


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/42 (26%), Positives = 18/42 (42%)
 Frame = -3

Query: 500 WRPAAGIQEAGERRQRDREEDPVLAPRPARLPHVLPDQPGHH 375
           W+ A G +       R+R    +L+     L HV  D+ G +
Sbjct: 743 WKKATGSKSGEYEELRERAYTKILSNGTLLLQHVKEDREGFY 784


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/42 (26%), Positives = 18/42 (42%)
 Frame = -3

Query: 500 WRPAAGIQEAGERRQRDREEDPVLAPRPARLPHVLPDQPGHH 375
           W+ A G +       R+R    +L+     L HV  D+ G +
Sbjct: 739 WKKATGSKSGEYEELRERAYTKILSNGTLLLQHVKEDREGFY 780


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -1

Query: 601 FWPTGRGIYHNENKTFLVWCNEEDHLRIISMQM 503
           F+  GRGI + + K   V  +++ H++I    M
Sbjct: 99  FFLHGRGIVYRDLKLDNVLLDQDGHIKIADFGM 131


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,264
Number of Sequences: 438
Number of extensions: 2291
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)